Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG3G60 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.343 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.348 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.349 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.350 Anthoceros agrestis
Actinidia13867 Actinidia chinensis
Actinidia29212 Actinidia chinensis
Ah.16g107250 Amaranthus hybridus
AL3G24260 Arabidopsis lyrata
Aqoxy2G02042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JMTW06 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8VZLW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XU51RJ Arachis hypogaea
AT3G12590 Arabidopsis thaliana
ATR0559G344 Amborella trichopoda
Atru.chr12.508 Acer truncatum
AUR62038371 Chenopodium quinoa
AUR62040961 Chenopodium quinoa
BcaB04g18705 Brassica carinata
BcaB04g21053 Brassica carinata
BcaB04g21060 Brassica carinata
BcaB04g21068 Brassica carinata
BcaC01g04018 Brassica carinata
BNapus_Darmor_BZH_scaffold_149p00120 Brassica napus
BolC1t05197H Brassica oleracea
BolC3t16849H Brassica oleracea
BolC8t48103H Brassica oleracea
BraA01t04124Z Brassica rapa
BraA03t12924Z Brassica rapa
C01p52580 Brassica napus
CANSAT56G4002 Cannabis sativa
CARHR087100 Cardamine hirsuta
Carub.0003s1194 Capsella rubella
Ca_07234_v3 Cicer arietinum L.
CBR_g54636 Chara braunii
Cc02_g08160 Coffea canephora
CDE04G2206 Ceratophyllum demersum
Cfa001505 Carpinus fangiana
Cfa005276 Carpinus fangiana
Ciclev10030542m.g Citrus clementina
CiPaw.01G284400 Carya illinoinensis
CiPaw.02G182400 Carya illinoinensis
CiPaw.02G182500 Carya illinoinensis
ClCG07G003370 Citrullus lanatus
COL.COLO4_14967 Corchorus olitorius
Cpa.g.sc1.377 Carica papaya
Cpa.g.sc1437.1 Carica papaya
Cre17.g707100 Chlamydomonas reinhardtii
CsaV3_5G008100 Cucumis sativus L.
CSS0036524 Camellia sinensis var. sinensis
DCAR_015196 Daucus carota
DCAR_019167 Daucus carota
Dinv21543 Davidia involucrata
Dinv25990 Davidia involucrata
Dinv31435 Davidia involucrata
Duzib106G1820 Durio zibethinus
Duzib114G0580 Durio zibethinus
ECA238G1619 Erigeron canadensis
EL10Ac2g03418 Beta vulgaris
Eucgr.G02920 Eucalyptus grandis
FAN01G0794 Fragaria x ananassa
FAN01G1867 Fragaria x ananassa
FAN01G2126 Fragaria x ananassa
FAN01G2840 Fragaria x ananassa
FAN03G1397 Fragaria x ananassa
FAN03G1547 Fragaria x ananassa
FAN03G2077 Fragaria x ananassa
FAN06G1862 Fragaria x ananassa
FAN06G3343 Fragaria x ananassa
FAN06G3693 Fragaria x ananassa
FAN06G3757 Fragaria x ananassa
FAN06G4849 Fragaria x ananassa
FAN10G0299 Fragaria x ananassa
FAN11G1748 Fragaria x ananassa
FAN14G4766 Fragaria x ananassa
FAN18G1692 Fragaria x ananassa
FAN25G3365 Fragaria x ananassa
FAN25G3689 Fragaria x ananassa
FvH4_7g21970 Fragaria vesca
FvH4_7g22001 Fragaria vesca
FvH4_7g22002 Fragaria vesca
FvH4_7g26620 Fragaria vesca
Glyma.02G093600 Glycine max
Glyma.10G289700 Glycine max
Glyma.18G288500 Glycine max
Glyma.20G099500 Glycine max
Gohir.A05G350100 Gossypium hirsutum
Gohir.A10G215800 Gossypium hirsutum
Gohir.A12G155100 Gossypium hirsutum
Gohir.D02G008125 Gossypium hirsutum
Gohir.D04G062400 Gossypium hirsutum
Gohir.D05G040350 Gossypium hirsutum
Gohir.D10G224800 Gossypium hirsutum
Gorai.005G009800 Gossypium raimondii
Gorai.011G255800 Gossypium raimondii
Gorai.012G069700 Gossypium raimondii
GSVIVG01016585001 Vitis vinifera
HanXRQChr07g0201231 Helianthus annuus
Haze_17038 Corylus avellana
Hma1.2p1_0067F.1_g037070 Hydrangea macrophylla
Hma1.2p1_0727F.1_g209200 Hydrangea macrophylla
Hma1.2p1_1137F.1_g260730 Hydrangea macrophylla
HPP92_003382 Vanilla planifolia
Hund20020 Selenicereus undatus
Lalb_Chr04g0257821 Lupinus albus
Lalb_Chr06g0164301 Lupinus albus
Lj1g0007112 Lotus japonicus
Lj8C86G13 Lonicera japonica
LjContig00357g0027530 Lotus japonicus
Lsat_1_v5_gn_2_117761 Lactuca sativa
Manes.10G033000 Manihot esculenta
Mapoly0126s0012 Marchantia polymorpha
MBI05_g10364_MAGBIO Magnolia biondii
MD01G1124000 Malus domestica
MD07G1194200 Malus domestica
Medtr7g024190 Medicago truncatula
MELO3C023859.2 Cucumis melo
Migut.F01518 Erythranthe guttata
MSTRG.8235 Avicennia marina
Nitab4.5_0001836g0020 Nicotiana tabacum
Nitab4.5_0001836g0030 Nicotiana tabacum
Nitab4.5_0005137g0010 Nicotiana tabacum
Nitab4.5_0005137g0020 Nicotiana tabacum
Nitab4.5_0005137g0030 Nicotiana tabacum
Nn2g10418 Nelumbo nucifera
Nn8g40630 Nelumbo nucifera
Oeu012240.1 Olea europaea
Oeu016023.5 Olea europaea
Os01g0974300 Oryza sativa ssp. japonica
Peaxi162Scf00658g00725 Petunia axillaris
Peaxi162Scf00658g00731 Petunia axillaris
Peaxi162Scf00658g00733 Petunia axillaris
PGR142G1305 Punica granatum
Phvul.008G013500 Phaseolus vulgaris
Potri.008G052700 Populus trichocarpa
Potri.010G207900 Populus trichocarpa
Pp3c24_6470 Physcomitrium patens
Prupe.2G231600 Prunus persica
Psat3g180760 Pisum sativum
Psat6g236080 Pisum sativum
Psat6g236120 Pisum sativum
PSO339G3310 Papaver somniferum
QL08p059042 Quercus lobata
QL08p059051 Quercus lobata
RcHm_v2.0_Chr1g0366301 Rosa chinensis
Rhsim09G0164300 Rhododendron simsii
Sabra10G0160500 Salix brachista
SalBow6G0580 Salvia bowleyana
Sc20g0002620 Simmondsia chinensis
Sed0019555 Sechium edule
SEGI_35631 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00996 Striga asiatica
SHI22580 Sapria himalayana
SHI22581 Sapria himalayana
SHI22582 Sapria himalayana
SHI22584 Sapria himalayana
SHI22586 Sapria himalayana
SHI22587 Sapria himalayana
SMO146G0347 Selaginella moellendorffii
Solyc06g042950.3 Solanum lycopersicum
Solyc06g042960.3 Solanum lycopersicum
Solyc06g042980.3 Solanum lycopersicum
Sopen06g010560 Solanum pennellii
Sp3g10730 Schrenkiella parvula
TAR633G2080 Trochodendron aralioides
THA.LOC104799352 Tarenaya hassleriana
Thecc.10G046900 Theobroma cacao
Thhalv10019927m.g Eutrema salsugineum
TPR.G15495 Trifolium pratense
TWI15G0503 Tripterygium wilfordii
TWI38G1478 Tripterygium wilfordii
unitig_26.g10019 Utricularia gibba
Zm00001eb139750 Zea mays

User provided reference genes

Program Settings