Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia14929 Actinidia chinensis
Ah.16g101490 Amaranthus hybridus
Aqoxy3G00188 Aquilegia oxysepala
Aqoxy3G03994 Aquilegia oxysepala
Aqoxy3G03995 Aquilegia oxysepala
Aqoxy3G03996 Aquilegia oxysepala
Aqoxy3G03997 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea
Atru.chr1.1607 Acer truncatum
Atru.chr11.263 Acer truncatum
Atru.chr11.283 Acer truncatum
AUR62023219 Chenopodium quinoa
AUR62044612 Chenopodium quinoa
CANSAT01G2259 Cannabis sativa
CANSAT78G1768 Cannabis sativa
Ca_08095_v3 Cicer arietinum L.
Ca_08096_v3 Cicer arietinum L.
Ca_08097_v3 Cicer arietinum L.
Cc07_g08490 Coffea canephora
Cc11_g09580 Coffea canephora
CDE10G0393 Ceratophyllum demersum
Cfa015828 Carpinus fangiana
Cfa015829 Carpinus fangiana
Ciclev10013069m.g Citrus clementina
Ciclev10013071m.g Citrus clementina
Ciclev10013668m.g Citrus clementina
Ciclev10017483m.g Citrus clementina
Ciclev10017837m.g Citrus clementina
Ciclev10017934m.g Citrus clementina
Ciclev10018020m.g Citrus clementina
Ciclev10018255m.g Citrus clementina
CiPaw.03G065300 Carya illinoinensis
CiPaw.04G044300 Carya illinoinensis
CiPaw.05G243300 Carya illinoinensis
CiPaw.05G243400 Carya illinoinensis
ClCG01G005940 Citrullus lanatus
COL.COLO4_09380 Corchorus olitorius
COL.COLO4_32105 Corchorus olitorius
Cpa.g.sc314.3 Carica papaya
CsaV3_5G028760 Cucumis sativus L.
CSS0019285 Camellia sinensis var. sinensis
CSS0038275 Camellia sinensis var. sinensis
DCAR_010706 Daucus carota
DCAR_010707 Daucus carota
DCAR_010708 Daucus carota
DCAR_010709 Daucus carota
DCAR_010710 Daucus carota
DCAR_010711 Daucus carota
DCAR_010712 Daucus carota
DCAR_010713 Daucus carota
DCAR_023626 Daucus carota
DCAR_023627 Daucus carota
DCAR_025900 Daucus carota
Dinv16146 Davidia involucrata
Dinv31584 Davidia involucrata
Dinv33967 Davidia involucrata
Duzib138G0221 Durio zibethinus
EL10Ac2g04523 Beta vulgaris
Eucgr.B02857 Eucalyptus grandis
Eucgr.F02795 Eucalyptus grandis
Eucgr.G02232 Eucalyptus grandis
FAN07G0530 Fragaria x ananassa
FAN07G0543 Fragaria x ananassa
FAN07G1535 Fragaria x ananassa
FAN12G0456 Fragaria x ananassa
FAN12G1400 Fragaria x ananassa
FAN12G1602 Fragaria x ananassa
FAN12G1821 Fragaria x ananassa
FAN12G3833 Fragaria x ananassa
FAN12G4350 Fragaria x ananassa
FAN17G0453 Fragaria x ananassa
FAN17G2061 Fragaria x ananassa
FAN17G2092 Fragaria x ananassa
FAN22G1760 Fragaria x ananassa
FAN22G1832 Fragaria x ananassa
FAN22G1944 Fragaria x ananassa
FvH4_4g26582 Fragaria vesca
FvH4_4g26590 Fragaria vesca
FvH4_4g26620 Fragaria vesca
FvH4_4g26630 Fragaria vesca
Glyma.02G089400 Glycine max
Glyma.02G089500 Glycine max
Glyma.18G293500 Glycine max
Glyma.18G293600 Glycine max
Gohir.A11G166400 Gossypium hirsutum
Gohir.D11G172400 Gossypium hirsutum
Gohir.D11G172800 Gossypium hirsutum
Gorai.007G185100 Gossypium raimondii
HanXRQChr09g0262641 Helianthus annuus
Haze_00662 Corylus avellana
Haze_14190 Corylus avellana
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla
Hma1.2p1_0767F.1_g215470 Hydrangea macrophylla
HPP92_009718 Vanilla planifolia
Lalb_Chr04g0257671 Lupinus albus
Lalb_Chr17g0335981 Lupinus albus
Lj1g0013725 Lotus japonicus
Lj1g0017758 Lotus japonicus
Lj1g0018189 Lotus japonicus
Lj1g0027246 Lotus japonicus
Lsat_1_v5_gn_3_82781 Lactuca sativa
Manes.01G113100 Manihot esculenta
Manes.02G072000 Manihot esculenta
Manes.14G107900 Manihot esculenta
MBI10_g08537_MAGBIO Magnolia biondii
MBI16_g14296_MAGBIO Magnolia biondii
MBI16_g14297_MAGBIO Magnolia biondii
MBI16_g14298_MAGBIO Magnolia biondii
MBI18_g04358_MAGBIO Magnolia biondii
Medtr3g100640 Medicago truncatula
Medtr7g082700 Medicago truncatula
Medtr7g082725 Medicago truncatula
Medtr7g082730 Medicago truncatula
Medtr7g082740 Medicago truncatula
Medtr7g082750 Medicago truncatula
Medtr7g082760 Medicago truncatula
MELO3C005337.2 Cucumis melo
Migut.H00242 Erythranthe guttata
Migut.L00492 Erythranthe guttata
MSTRG.23597 Avicennia marina
Nn3g17968 Nelumbo nucifera
Nn4g23971 Nelumbo nucifera
Oeu012583.1 Olea europaea
Oeu030797.1 Olea europaea
Oeu030798.1 Olea europaea
Oeu041981.1 Olea europaea
Oeu047438.1 Olea europaea
PGR004G1762 Punica granatum
PGR102G0077 Punica granatum
PGSC0003DMG400016976 Solanum tuberosum
PGSC0003DMG400030667 Solanum tuberosum
PGSC0003DMG400036326 Solanum tuberosum
Phvul.008G008700 Phaseolus vulgaris
Phvul.008G008800 Phaseolus vulgaris
Potri.004G095150 Populus trichocarpa
Potri.004G095200 Populus trichocarpa
Potri.010G119200 Populus trichocarpa
Potri.017G119800 Populus trichocarpa
Prupe.1G317600 Prunus persica
Prupe.1G317700 Prunus persica
Psat3g097240 Pisum sativum
Psat3g097280 Pisum sativum
Psat3g097320 Pisum sativum
Psat3g097360 Pisum sativum
QL02p050215 Quercus lobata
RcHm_v2.0_Chr4g0434241 Rosa chinensis
RcHm_v2.0_Chr4g0434311 Rosa chinensis
Rhsim08G0083900 Rhododendron simsii
Rhsim09G0103100 Rhododendron simsii
Rhsim09G0103200 Rhododendron simsii
Rhsim10G0073300 Rhododendron simsii
Sabra04G0064400 Salix brachista
Sabra10G0089600 Salix brachista
Sabra17G0098800 Salix brachista
SalBow3G0055 Salvia bowleyana
SalBow5G1592 Salvia bowleyana
Sed0027184 Sechium edule
SGA_v2.0_scaffold202G41473 Striga asiatica
TAR622G0216 Trochodendron aralioides
TAR622G1405 Trochodendron aralioides
TAR629G2241 Trochodendron aralioides
Thecc.02G220400 Theobroma cacao
Thecc.04G128000 Theobroma cacao
TPR.G11392 Trifolium pratense
TPR.G16541 Trifolium pratense
TPR.G16550 Trifolium pratense
TPR.G16561 Trifolium pratense
TWI31G0152 Tripterygium wilfordii
VMungo1383G0607 Vigna mungo
VMungo1383G2158 Vigna mungo

User provided reference genes

Program Settings