Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06100 Brassica napus
A07p21670 Brassica napus
A10p32990 Brassica napus
Aa31LG10G9640 Aethionema arabicum
Aa31LG10G9670 Aethionema arabicum
Aa31LG1G22160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2779 Anthoceros agrestis
Actinidia05286 Actinidia chinensis
Ah.08g212360 Amaranthus hybridus
AL5G34410 Arabidopsis lyrata
AL6G11960 Arabidopsis lyrata
Aqoxy4G03101 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6R95LH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9VFE0J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H9GTJP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y28VT2 Arachis hypogaea
AT3G53490 Arabidopsis thaliana
AT5G02720 Arabidopsis thaliana
ATR0594G136 Amborella trichopoda
ATR0594G139 Amborella trichopoda
ATR0594G174 Amborella trichopoda
Atru.chr8.2505 Acer truncatum
AUR62041005 Chenopodium quinoa
AUR62042140 Chenopodium quinoa
AUR62044395 Chenopodium quinoa
BcaB02g07781 Brassica carinata
BcaB02g08525 Brassica carinata
BcaC02g09159 Brassica carinata
BcaC06g32007 Brassica carinata
BcaC08g44627 Brassica carinata
BcaNung03280 Brassica carinata
BolC3t12673H Brassica oleracea
BolC4t25479H Brassica oleracea
BolC6t37328H Brassica oleracea
BolC9t60131H Brassica oleracea
BraA04t16312Z Brassica rapa
BraA07t29848Z Brassica rapa
BraA10t45336Z Brassica rapa
C03p01140 Brassica napus
C04p39050 Brassica napus
C06p21460 Brassica napus
C09p73960 Brassica napus
CAN.G435.5 Capsicum annuum
CANSAT80G1299 Cannabis sativa
CARHR163390 Cardamine hirsuta
CARHR210670 Cardamine hirsuta
Carub.0005s2006 Capsella rubella
Carub.0006s0148 Capsella rubella
Ca_08806_v3 Cicer arietinum L.
Ca_11436_v3 Cicer arietinum L.
Cc06_g03260 Coffea canephora
CDE04G1398 Ceratophyllum demersum
CDE07G0262 Ceratophyllum demersum
Cfa017465 Carpinus fangiana
Ciclev10012656m.g Citrus clementina
CiPaw.09G185500 Carya illinoinensis
CiPaw.10G139500 Carya illinoinensis
ClCG04G008650 Citrullus lanatus
COL.COLO4_10313 Corchorus olitorius
Cpa.g.sc114.23 Carica papaya
CsaV3_4G024510 Cucumis sativus L.
Dinv35674 Davidia involucrata
Dinv35675 Davidia involucrata
Dinv37231 Davidia involucrata
Duzib093G0371 Durio zibethinus
Duzib128G0701 Durio zibethinus
ECA248G1662 Erigeron canadensis
EL10Ac7g17278 Beta vulgaris
FAN02G3315 Fragaria x ananassa
FAN05G3362 Fragaria x ananassa
FAN14G1560 Fragaria x ananassa
FvH4_6g14800 Fragaria vesca
Glyma.03G175700 Glycine max
Glyma.10G046900 Glycine max
Glyma.13G134900 Glycine max
Glyma.19G176300 Glycine max
Gohir.A01G218200 Gossypium hirsutum
Gohir.A13G095435 Gossypium hirsutum
Gohir.D01G207100 Gossypium hirsutum
Gohir.D13G097300 Gossypium hirsutum
Gorai.001G248900 Gossypium raimondii
Gorai.002G252200 Gossypium raimondii
GSVIVG01025578001 Vitis vinifera
HanXRQChr11g0349611 Helianthus annuus
HanXRQChr13g0392181 Helianthus annuus
Haze_20694 Corylus avellana
HPP92_006587 Vanilla planifolia
HPP92_015408 Vanilla planifolia
HPP92_026988 Vanilla planifolia
HPP92_026989 Vanilla planifolia
Hund12072 Selenicereus undatus
Lalb_Chr01g0019101 Lupinus albus
Lalb_Chr20g0113041 Lupinus albus
Lalb_Chr25g0289361 Lupinus albus
Lj1g0024664 Lotus japonicus
Lj2C103T21 Lonicera japonica
Lj3A975G70 Lonicera japonica
Lj5g0017469 Lotus japonicus
Lsat_1_v5_gn_1_54740 Lactuca sativa
Manes.08G000500 Manihot esculenta
Mapoly0179s0007 Marchantia polymorpha
MBI05_g22082_MAGBIO Magnolia biondii
MD04G1110000 Malus domestica
MD12G1131500 Malus domestica
Medtr1g067320 Medicago truncatula
Medtr7g100150 Medicago truncatula
MELO3C003083.2 Cucumis melo
Migut.L01642 Erythranthe guttata
MSTRG.19117 Avicennia marina
Nitab4.5_0000202g0310 Nicotiana tabacum
Nitab4.5_0000643g0160 Nicotiana tabacum
Nitab4.5_0006252g0020 Nicotiana tabacum
Nn2g10562 Nelumbo nucifera
Nn2g12823 Nelumbo nucifera
Oeu035162.1 Olea europaea
Oeu049603.1 Olea europaea
Os03g0282800 Oryza sativa ssp. japonica
Peaxi162Scf00597g00310 Petunia axillaris
Peaxi162Scf00604g00010 Petunia axillaris
PGR004G1528 Punica granatum
PGSC0003DMG400011053 Solanum tuberosum
Phvul.001G172800 Phaseolus vulgaris
Phvul.007G161100 Phaseolus vulgaris
Potri.016G081900 Populus trichocarpa
Pp3c17_20730 Physcomitrium patens
Pp3c17_20731 Physcomitrium patens
Pp3c2_4500 Physcomitrium patens
Prupe.6G245800 Prunus persica
Psat0s1952g0040 Pisum sativum
Psat6g069360 Pisum sativum
PSO339G1720 Papaver somniferum
PSO384G5009 Papaver somniferum
PSO675G5312 Papaver somniferum
PSO699G0012 Papaver somniferum
QL07p045968 Quercus lobata
RcHm_v2.0_Chr3g0468021 Rosa chinensis
Rhsim05G0184700 Rhododendron simsii
Sabra16G0089600 Salix brachista
SalBow4G2839 Salvia bowleyana
Sc20g0004290 Simmondsia chinensis
Sed0004085 Sechium edule
Sed0004679 Sechium edule
SEGI_28610 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14186 Striga asiatica
SHI12648 Sapria himalayana
SMO164G0167 Selaginella moellendorffii
Solyc09g005960.4 Solanum lycopersicum
Solyc10g084500.1 Solanum lycopersicum
Sopen09g001820 Solanum pennellii
Sopen10g033930 Solanum pennellii
Sp5g08850 Schrenkiella parvula
Sp6g39850 Schrenkiella parvula
TAR633G1989 Trochodendron aralioides
THA.LOC104806513 Tarenaya hassleriana
THA.LOC104816298 Tarenaya hassleriana
Thecc.05G049300 Theobroma cacao
Thhalv10010698m.g Eutrema salsugineum
Thhalv10016063m.g Eutrema salsugineum
TPR.G21459 Trifolium pratense
TPR.G7552 Trifolium pratense
TWI74G1169 Tripterygium wilfordii
TWI77G0888 Tripterygium wilfordii
unitig_578.g16044 Utricularia gibba
unitig_8.g4322 Utricularia gibba
vmacro08681 Vaccinium macrocarpon
vmacro08682 Vaccinium macrocarpon
vmacro20095 Vaccinium macrocarpon
VMungo0720G0415 Vigna mungo
VMungo1383G1764 Vigna mungo
Zm00001eb012900 Zea mays
Zm00001eb131400 Zea mays
Zm00001eb346430 Zea mays
Zm00001eb397300 Zea mays

User provided reference genes

Program Settings