Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p02610 Brassica napus
A09p50400 Brassica napus
Aa31LG10G12370 Aethionema arabicum
Actinidia09345 Actinidia chinensis
Actinidia24529 Actinidia chinensis
AL4G40200 Arabidopsis lyrata
AL5G39120 Arabidopsis lyrata
Aqoxy1G00285 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.49FMRE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AM9K84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GL61MB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L89JBM Arachis hypogaea
AT2G41870 Arabidopsis thaliana
AT3G57540 Arabidopsis thaliana
ATR0332G033 Amborella trichopoda
Atru.chr1.1058 Acer truncatum
AUR62024421 Chenopodium quinoa
AUR62026012 Chenopodium quinoa
BcaB02g07595 Brassica carinata
BcaC07g40371 Brassica carinata
BcaC07g40387 Brassica carinata
BcaNung07195 Brassica carinata
BolC4t21952H Brassica oleracea
BolC8t50907H Brassica oleracea
BraA05t19254Z Brassica rapa
BraA09t40492Z Brassica rapa
C04p03110 Brassica napus
C08p33070 Brassica napus
CAN.G128.15 Capsicum annuum
CAN.G676.50 Capsicum annuum
CANSAT80G2886 Cannabis sativa
CARHR136960 Cardamine hirsuta
CARHR167760 Cardamine hirsuta
Carub.0004s2418 Capsella rubella
Carub.0005s2438 Capsella rubella
Ca_08471_v3 Cicer arietinum L.
Ca_26888_v3 Cicer arietinum L.
Ca_29692_v3 Cicer arietinum L.
Cc06_g16910 Coffea canephora
Cfa016842 Carpinus fangiana
Ciclev10005594m.g Citrus clementina
CiPaw.09G036400 Carya illinoinensis
CiPaw.10G032000 Carya illinoinensis
ClCG10G016620 Citrullus lanatus
COL.COLO4_28207 Corchorus olitorius
Cpa.g.sc92.28 Carica papaya
CsaV3_3G039720 Cucumis sativus L.
CSS0022151 Camellia sinensis var. sinensis
DCAR_013590 Daucus carota
DCAR_020477 Daucus carota
Dinv02133 Davidia involucrata
Dinv02134 Davidia involucrata
Dinv04146 Davidia involucrata
Dinv18064 Davidia involucrata
Dinv30701 Davidia involucrata
Dinv34908 Davidia involucrata
Duzib093G0278 Durio zibethinus
Duzib106G1229 Durio zibethinus
Duzib128G1686 Durio zibethinus
ECA236G0930 Erigeron canadensis
ECA247G2970 Erigeron canadensis
ECA248G2911 Erigeron canadensis
EL10Ac3g07036 Beta vulgaris
Eucgr.A02379 Eucalyptus grandis
FAN02G3665 Fragaria x ananassa
FAN05G0004 Fragaria x ananassa
FAN05G5649 Fragaria x ananassa
FAN09G1680 Fragaria x ananassa
FAN14G3078 Fragaria x ananassa
FvH4_6g23510 Fragaria vesca
Glyma.02G182600 Glycine max
Glyma.03G138100 Glycine max
Glyma.10G099400 Glycine max
Glyma.19G141100 Glycine max
Gohir.A11G312000 Gossypium hirsutum
Gohir.A11G312100 Gossypium hirsutum
Gohir.D11G328600 Gossypium hirsutum
Gorai.007G359900 Gossypium raimondii
HanXRQChr01g0008631 Helianthus annuus
HanXRQChr05g0132091 Helianthus annuus
HanXRQChr10g0300061 Helianthus annuus
HanXRQChr10g0300071 Helianthus annuus
Haze_19884 Corylus avellana
Haze_19892 Corylus avellana
Hma1.2p1_0247F.1_g101840 Hydrangea macrophylla
Hma1.2p1_0696F.1_g204640 Hydrangea macrophylla
Hma1.2p1_0794F.1_g218730 Hydrangea macrophylla
HPP92_019616 Vanilla planifolia
HPP92_019624 Vanilla planifolia
Hund24724 Selenicereus undatus
Lalb_Chr20g0110781 Lupinus albus
Lalb_Chr25g0287361 Lupinus albus
Lj1g0010539 Lotus japonicus
Lj2C380T14 Lonicera japonica
Lju124C36T16 Lonicera japonica
Lsat_1_v5_gn_5_162320 Lactuca sativa
Lsat_1_v5_gn_8_79621 Lactuca sativa
Lsat_1_v5_gn_9_27220 Lactuca sativa
Manes.08G049300 Manihot esculenta
Manes.09G024700 Manihot esculenta
MBI02_g05658_MAGBIO Magnolia biondii
MBI04_g36073_MAGBIO Magnolia biondii
MD12G1072300 Malus domestica
MD14G1069500 Malus domestica
Medtr1g052560 Medicago truncatula
Medtr7g091990 Medicago truncatula
MELO3C009714.2 Cucumis melo
Migut.J01771 Erythranthe guttata
MSTRG.10823 Avicennia marina
MSTRG.19874 Avicennia marina
MSTRG.6438 Avicennia marina
Nitab4.5_0000733g0190 Nicotiana tabacum
Nitab4.5_0001509g0060 Nicotiana tabacum
Nitab4.5_0001663g0020 Nicotiana tabacum
Nitab4.5_0002841g0040 Nicotiana tabacum
Nn2g15346 Nelumbo nucifera
Nn7g36226 Nelumbo nucifera
Oeu017953.1 Olea europaea
Oeu033785.1 Olea europaea
Oeu056892.1 Olea europaea
Oeu064312.1 Olea europaea
Os03g0808300 Oryza sativa ssp. japonica
Os07g0208600 Oryza sativa ssp. japonica
Os07g0569100 Oryza sativa ssp. japonica
Peaxi162Scf00493g00316 Petunia axillaris
Peaxi162Scf01287g00012 Petunia axillaris
PGR004G1680 Punica granatum
PGSC0003DMG400023721 Solanum tuberosum
PGSC0003DMG400027238 Solanum tuberosum
Phvul.001G135500 Phaseolus vulgaris
Phvul.007G253600 Phaseolus vulgaris
Potri.006G053200 Populus trichocarpa
Potri.016G054400 Populus trichocarpa
Prupe.7G064800 Prunus persica
Psat3g079320 Pisum sativum
PSO339G1536 Papaver somniferum
PSO384G1698 Papaver somniferum
QL07p021067 Quercus lobata
RcHm_v2.0_Chr3g0481501 Rosa chinensis
Rhsim03G0018200 Rhododendron simsii
Sabra06G0037600 Salix brachista
SalBow1G5147 Salvia bowleyana
SalBow6G3128 Salvia bowleyana
Sc13g0001870 Simmondsia chinensis
Sed0004660 Sechium edule
SGA_v2.0_scaffold69G23102 Striga asiatica
Solyc04g015520.3 Solanum lycopersicum
Solyc10g080230.2 Solanum lycopersicum
Solyc10g080240.1 Solanum lycopersicum
Sopen04g007590 Solanum pennellii
Sopen10g030840 Solanum pennellii
Sp4g24140 Schrenkiella parvula
Sp5g05050 Schrenkiella parvula
TAR057G0003 Trochodendron aralioides
TAR369G1158 Trochodendron aralioides
TAR633G1984 Trochodendron aralioides
THA.LOC104824453 Tarenaya hassleriana
Thecc.05G159200 Theobroma cacao
Thhalv10006130m.g Eutrema salsugineum
Thhalv10017761m.g Eutrema salsugineum
TPR.G21399 Trifolium pratense
TPR.G3730 Trifolium pratense
TWI53G1485 Tripterygium wilfordii
TWI74G0684 Tripterygium wilfordii
TWI77G1037 Tripterygium wilfordii
unitig_8.g4575 Utricularia gibba
vmacro22363 Vaccinium macrocarpon
vmacro22364 Vaccinium macrocarpon
VMungo0720G0143 Vigna mungo
VMungo1383G2713 Vigna mungo
Zm00001eb061820 Zea mays
Zm00001eb107230 Zea mays
Zm00001eb324720 Zea mays

User provided reference genes

Program Settings