Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08850 Brassica napus
Aa31LG3G12850 Aethionema arabicum
Actinidia29906 Actinidia chinensis
Actinidia38450 Actinidia chinensis
Actinidia38451 Actinidia chinensis
AL290U10010 Arabidopsis lyrata
AL8G32820 Arabidopsis lyrata
Aqoxy7G04020 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0BQ45N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H4FASW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX4JUX Arachis hypogaea
AT5G56960 Arabidopsis thaliana
ATR0749G078 Amborella trichopoda
Atru.chr7.1612 Acer truncatum
AUR62029052 Chenopodium quinoa
AUR62033947 Chenopodium quinoa
BcaB05g22300 Brassica carinata
BcaB08g36035 Brassica carinata
BcaC03g14194 Brassica carinata
BcaC04g20035 Brassica carinata
BolC2t07605H Brassica oleracea
BolC9t57704H Brassica oleracea
BolC9t57705H Brassica oleracea
BraA02t05954Z Brassica rapa
C02p14760 Brassica napus
C09p48620 Brassica napus
CAN.G3656.1 Capsicum annuum
CAN.G52.7 Capsicum annuum
CANSAT56G2242 Cannabis sativa
CARHR270700 Cardamine hirsuta
Carub.0008s1744 Capsella rubella
Cc06_g11520 Coffea canephora
CDE04G0617 Ceratophyllum demersum
CDE06G2535 Ceratophyllum demersum
Cfa003070 Carpinus fangiana
Ciclev10007937m.g Citrus clementina
CiPaw.03G214200 Carya illinoinensis
CiPaw.04G148500 Carya illinoinensis
ClCG03G015470 Citrullus lanatus
ClCG11G001730 Citrullus lanatus
COL.COLO4_18190 Corchorus olitorius
Cpa.g.sc61.16 Carica papaya
CsaV3_1G040580 Cucumis sativus L.
CsaV3_2G001440 Cucumis sativus L.
CSS0003764 Camellia sinensis var. sinensis
CSS0005796 Camellia sinensis var. sinensis
DCAR_011967 Daucus carota
DCAR_031333 Daucus carota
Dinv04215 Davidia involucrata
Dinv36776 Davidia involucrata
Dinv42328 Davidia involucrata
Dinv42329 Davidia involucrata
Duzib168G0233 Durio zibethinus
Duzib187G0197 Durio zibethinus
ECA240G1274 Erigeron canadensis
EL10Ac8g19192 Beta vulgaris
Eucgr.C03476 Eucalyptus grandis
FAN19G2456 Fragaria x ananassa
FAN23G2659 Fragaria x ananassa
FAN26G1668 Fragaria x ananassa
FAN26G3139 Fragaria x ananassa
FAN28G1400 Fragaria x ananassa
FvH4_1g07710 Fragaria vesca
Glyma.09G064200 Glycine max
Glyma.13G105400 Glycine max
Glyma.15G170500 Glycine max
Glyma.17G054000 Glycine max
Gohir.A05G030300 Gossypium hirsutum
Gohir.A07G011900 Gossypium hirsutum
Gohir.D05G031700 Gossypium hirsutum
Gohir.D06G071950 Gossypium hirsutum
Gohir.D07G011700 Gossypium hirsutum
Gorai.001G012400 Gossypium raimondii
Gorai.009G031900 Gossypium raimondii
Gorai.010G083900 Gossypium raimondii
GSVIVG01015189001 Vitis vinifera
HanXRQChr03g0060341 Helianthus annuus
HanXRQChr09g0238101 Helianthus annuus
Haze_25925 Corylus avellana
Hma1.2p1_0672F.1_g201130 Hydrangea macrophylla
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla
HPP92_023832 Vanilla planifolia
HPP92_023889 Vanilla planifolia
HPP92_026782 Vanilla planifolia
Hund25946 Selenicereus undatus
Lalb_Chr08g0232291 Lupinus albus
Lalb_Chr11g0074551 Lupinus albus
Lj4C294G8 Lonicera japonica
Lj4C294T9 Lonicera japonica
Lj4g0028074 Lotus japonicus
Lj6g0002908 Lotus japonicus
Lj7A677T52 Lonicera japonica
Lsat_1_v5_gn_7_36701 Lactuca sativa
Manes.03G034700 Manihot esculenta
Manes.16G101000 Manihot esculenta
MBI01_g09949_MAGBIO Magnolia biondii
MBI04_g36310_MAGBIO Magnolia biondii
MD02G1081600 Malus domestica
MD15G1208900 Malus domestica
Medtr2g039620 Medicago truncatula
MELO3C004627.2 Cucumis melo
MELO3C015488.2 Cucumis melo
Migut.J00583 Erythranthe guttata
Nitab4.5_0002593g0060 Nicotiana tabacum
Nitab4.5_0002824g0140 Nicotiana tabacum
Nitab4.5_0002824g0150 Nicotiana tabacum
Nitab4.5_0006053g0020 Nicotiana tabacum
Nn6g35501 Nelumbo nucifera
Nn8g38830 Nelumbo nucifera
Oeu017604.1 Olea europaea
Os01g0195801 Oryza sativa ssp. japonica
Os01g0196300 Oryza sativa ssp. japonica
Os01g0575200 Oryza sativa ssp. japonica
Os02g0221100 Oryza sativa ssp. japonica
Os05g0199800 Oryza sativa ssp. japonica
Os06g0570900 Oryza sativa ssp. japonica
Peaxi162Scf00028g00036 Petunia axillaris
Peaxi162Scf00221g00512 Petunia axillaris
Peaxi162Scf00498g00042 Petunia axillaris
Peaxi162Scf00498g00054 Petunia axillaris
Peaxi162Scf00498g00056 Petunia axillaris
PGR102G2684 Punica granatum
PGSC0003DMG400022043 Solanum tuberosum
Phvul.003G135700 Phaseolus vulgaris
Phvul.009G231600 Phaseolus vulgaris
Potri.006G148800 Populus trichocarpa
Prupe.7G207500 Prunus persica
Psat1g140200 Pisum sativum
PSO210G1620 Papaver somniferum
PSO210G4563 Papaver somniferum
QL02p062365 Quercus lobata
RcHm_v2.0_Chr2g0093571 Rosa chinensis
Rhsim03G0231600 Rhododendron simsii
Rhsim05G0018600 Rhododendron simsii
Sabra06G0117700 Salix brachista
SalBow1G5126 Salvia bowleyana
SalBow1G7755 Salvia bowleyana
SalBow6G2434 Salvia bowleyana
Sc08g0008540 Simmondsia chinensis
Sed0000136 Sechium edule
Sed0008144 Sechium edule
Sed0013460 Sechium edule
SGA_v2.0_scaffold23G10028 Striga asiatica
SGA_v2.0_scaffold62G21623 Striga asiatica
Solyc07g039570.3 Solanum lycopersicum
Solyc12g008930.3 Solanum lycopersicum
Sopen07g018910 Solanum pennellii
Sp6g18670 Schrenkiella parvula
TAR383G1057 Trochodendron aralioides
TAR624G0558 Trochodendron aralioides
TAR636G3314 Trochodendron aralioides
THA.LOC104811746 Tarenaya hassleriana
THA.LOC104818114 Tarenaya hassleriana
Thecc.09G087400 Theobroma cacao
Thhalv10013360m.g Eutrema salsugineum
TPR.G13416 Trifolium pratense
TPR.G866 Trifolium pratense
TWI34G0199 Tripterygium wilfordii
unitig_749.g14229 Utricularia gibba
unitig_78.g29617 Utricularia gibba
vmacro06298 Vaccinium macrocarpon
vmacro17254 Vaccinium macrocarpon
VMungo1215G0279 Vigna mungo
VMungo1215G3226 Vigna mungo
VMungo1309G0851 Vigna mungo
Zm00001eb120960 Zea mays
Zm00001eb160210 Zea mays
Zm00001eb240050 Zea mays
Zm00001eb284130 Zea mays
Zm00001eb337860 Zea mays
Zm00001eb347270 Zea mays
Zm00001eb357120 Zea mays
Zm00001eb385110 Zea mays

User provided reference genes

Program Settings