Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p07530 Brassica napus
Aa31LG6G9340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.505 Anthoceros agrestis
Actinidia21326 Actinidia chinensis
Ah.05g171070 Amaranthus hybridus
AL1G52310 Arabidopsis lyrata
Aqoxy6G00221 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P29Y0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PA3NAF Arachis hypogaea
AT1G44446 Arabidopsis thaliana
ATR0584G119 Amborella trichopoda
Atru.chr13.1487 Acer truncatum
AUR62014331 Chenopodium quinoa
AUR62019074 Chenopodium quinoa
BcaB01g01218 Brassica carinata
BcaB01g01394 Brassica carinata
BcaB04g17588 Brassica carinata
BcaB07g33948 Brassica carinata
BcaC07g37298 Brassica carinata
BcaC08g42850 Brassica carinata
BolC6t35201H Brassica oleracea
BolC8t47573H Brassica oleracea
BraSC36t46051Z Brassica rapa
C06p00650 Brassica napus
C08p07320 Brassica napus
CAN.G1040.2 Capsicum annuum
CAN.G1040.4 Capsicum annuum
CAN.G2.28 Capsicum annuum
CARHR035930 Cardamine hirsuta
Carub.0001s3519 Capsella rubella
Ca_12629_v3 Cicer arietinum L.
CBR_g45555 Chara braunii
CBR_g46907 Chara braunii
Cc10_g11980 Coffea canephora
CDE02G4293 Ceratophyllum demersum
CDE06G1807 Ceratophyllum demersum
CDE08G1132 Ceratophyllum demersum
CDE08G1658 Ceratophyllum demersum
CDE08G1676 Ceratophyllum demersum
Cfa016023 Carpinus fangiana
Ciclev10000821m.g Citrus clementina
CiPaw.05G221100 Carya illinoinensis
CiPaw.06G031400 Carya illinoinensis
ClCG08G005680 Citrullus lanatus
COL.COLO4_16780 Corchorus olitorius
COL.COLO4_16785 Corchorus olitorius
Cpa.g.sc64.91 Carica papaya
Cre01.g043350 Chlamydomonas reinhardtii
Cre24.g755597 Chlamydomonas reinhardtii
CsaV3_6G034450 Cucumis sativus L.
CSS0049616 Camellia sinensis var. sinensis
DCAR_014388 Daucus carota
Dinv07215 Davidia involucrata
Dinv27308 Davidia involucrata
Duzib093G0750 Durio zibethinus
Duzib116G0519 Durio zibethinus
ECA232G4152 Erigeron canadensis
ECA247G1991 Erigeron canadensis
EL10Ac1g01020 Beta vulgaris
Eucgr.F03791 Eucalyptus grandis
FAN15G2848 Fragaria x ananassa
FAN20G2710 Fragaria x ananassa
FAN24G3123 Fragaria x ananassa
FAN27G1712 Fragaria x ananassa
FvH4_2g27000 Fragaria vesca
Glyma.04G249400 Glycine max
Glyma.06G113500 Glycine max
Glyma.13G078400 Glycine max
Glyma.14G150600 Glycine max
Gohir.A02G072900 Gossypium hirsutum
Gohir.A05G235300 Gossypium hirsutum
Gohir.D02G080100 Gossypium hirsutum
Gohir.D05G237600 Gossypium hirsutum
Gorai.005G089400 Gossypium raimondii
Gorai.009G246000 Gossypium raimondii
GSVIVG01008862001 Vitis vinifera
HanXRQChr04g0111611 Helianthus annuus
HanXRQChr11g0325991 Helianthus annuus
Haze_00436 Corylus avellana
Hma1.2p1_0129F.1_g060250 Hydrangea macrophylla
Hund17295 Selenicereus undatus
Hund26805 Selenicereus undatus
Hund26806 Selenicereus undatus
Lalb_Chr08g0241431 Lupinus albus
Lalb_Chr10g0101631 Lupinus albus
Lalb_Chr17g0343711 Lupinus albus
Lj1g0001948 Lotus japonicus
Lj4A628G54 Lonicera japonica
Lj7A342T52 Lonicera japonica
Lsat_1_v5_gn_1_8361 Lactuca sativa
Manes.02G163700 Manihot esculenta
Manes.18G077506 Manihot esculenta
Mapoly0101s0060 Marchantia polymorpha
MBI16_g07661_MAGBIO Magnolia biondii
MCO11G195 Micromonas commoda
MCO16G160 Micromonas commoda
MD08G1162200 Malus domestica
MD15G1347600 Malus domestica
Medtr1g030480 Medicago truncatula
MELO3C010614.2 Cucumis melo
Migut.C01130 Erythranthe guttata
MSTRG.1440 Avicennia marina
MSTRG.24171 Avicennia marina
Nitab4.5_0000322g0180 Nicotiana tabacum
Nitab4.5_0001803g0050 Nicotiana tabacum
Nitab4.5_0001996g0080 Nicotiana tabacum
Nitab4.5_0003719g0050 Nicotiana tabacum
Nn1g08791 Nelumbo nucifera
Nn5g28304 Nelumbo nucifera
Oeu026153.2 Olea europaea
Oeu028564.1 Olea europaea
Oeu040414.2 Olea europaea
Os10g0567100 Oryza sativa ssp. japonica
Os10g0567400 Oryza sativa ssp. japonica
Peaxi162Scf00051g01011 Petunia axillaris
PGR042G0804 Punica granatum
PGSC0003DMG400017570 Solanum tuberosum
PGSC0003DMG402000895 Solanum tuberosum
Phvul.008G161000 Phaseolus vulgaris
Phvul.008G167850 Phaseolus vulgaris
Phvul.L001769 Phaseolus vulgaris
Potri.002G083200 Populus trichocarpa
Potri.005G178300 Populus trichocarpa
Pp3c19_22390 Physcomitrium patens
Pp3c22_20970 Physcomitrium patens
Pp3c25_7170 Physcomitrium patens
PRCOL_00000629 Prasinoderma coloniale
PRCOL_00003666 Prasinoderma coloniale
Prupe.1G495400 Prunus persica
Psat6g041720 Pisum sativum
PSO170G0366 Papaver somniferum
PSO528G0101 Papaver somniferum
QL09p034469 Quercus lobata
RcHm_v2.0_Chr6g0295881 Rosa chinensis
Rhsim06G0103100 Rhododendron simsii
Sabra02G0065200 Salix brachista
Sabra05G0134800 Salix brachista
SalBow6G4711 Salvia bowleyana
SalBow7G0573 Salvia bowleyana
Sc02g0004900 Simmondsia chinensis
Sed0006403 Sechium edule
Sed0018002 Sechium edule
SEGI_00888 Sequoiadendron giganteum
SEGI_36005 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10457 Striga asiatica
SGA_v2.0_scaffold275G46567 Striga asiatica
SGA_v2.0_scaffold52G18962 Striga asiatica
SMO228G0162 Selaginella moellendorffii
Solyc03g095750.2 Solanum lycopersicum
Solyc04g024920.1 Solanum lycopersicum
Solyc06g060310.3 Solanum lycopersicum
Solyc09g015630.2 Solanum lycopersicum
Solyc11g012850.2 Solanum lycopersicum
Sopen04g007250 Solanum pennellii
Sopen06g020430 Solanum pennellii
Sopen11g007590 Solanum pennellii
Sopen12g025030 Solanum pennellii
Sp1g33540 Schrenkiella parvula
TAR376G1135 Trochodendron aralioides
TAR628G0371 Trochodendron aralioides
TAR628G1403 Trochodendron aralioides
THA.LOC104817365 Tarenaya hassleriana
Thecc.08G125900 Theobroma cacao
Thhalv10011377m.g Eutrema salsugineum
TPR.G25791 Trifolium pratense
TWI34G1725 Tripterygium wilfordii
TWI60G0519 Tripterygium wilfordii
unitig_22.g6737 Utricularia gibba
VMungo0647G0399 Vigna mungo
Zm00001eb089520 Zea mays
Zm00001eb140370 Zea mays
Zm00001eb279960 Zea mays
Zm00001eb362510 Zea mays

User provided reference genes

Program Settings