Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15190 Brassica napus
A02p40750 Brassica napus
A03p54820 Brassica napus
A06p35000 Brassica napus
Aa31LG11G3430 Aethionema arabicum
Aa31LG6G7140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.239 Anthoceros agrestis
Actinidia03163 Actinidia chinensis
Actinidia04200 Actinidia chinensis
Actinidia22162 Actinidia chinensis
Ah.07g197450 Amaranthus hybridus
AL6G35560 Arabidopsis lyrata
AL7G29460 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.E0UY0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T1KBZJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea
AT4G23885 Arabidopsis thaliana
AT5G24165 Arabidopsis thaliana
ATR0602G187 Amborella trichopoda
Atru.chr1.148 Acer truncatum
Atru.chr9.1978 Acer truncatum
Atru.chr9.1993 Acer truncatum
AUR62006115 Chenopodium quinoa
AUR62010843 Chenopodium quinoa
AUR62019374 Chenopodium quinoa
BcaB07g29898 Brassica carinata
BcaC09g50935 Brassica carinata
BcaNung01095 Brassica carinata
BcaNung01214 Brassica carinata
BcaNung01808 Brassica carinata
BcaNung04081 Brassica carinata
BcaNung04241 Brassica carinata
BolC1t01838H Brassica oleracea
BolC7t44882H Brassica oleracea
BraA01t01457Z Brassica rapa
BraA03t14549Z Brassica rapa
BraA06t26423Z Brassica rapa
C01p19120 Brassica napus
C07p43550 Brassica napus
C07p53180 Brassica napus
CANSAT21G2574 Cannabis sativa
CARHR189350 Cardamine hirsuta
CARHR231280 Cardamine hirsuta
Carub.0006s2191 Capsella rubella
Carub.0007s1723 Capsella rubella
Cc08_g16090 Coffea canephora
CDE02G2345 Ceratophyllum demersum
CDE09G0659 Ceratophyllum demersum
Ciclev10006352m.g Citrus clementina
Ciclev10023430m.g Citrus clementina
CiPaw.05G252200 Carya illinoinensis
CiPaw.05G255100 Carya illinoinensis
CiPaw.05G255500 Carya illinoinensis
CiPaw.11G121000 Carya illinoinensis
ClCG01G000480 Citrullus lanatus
ClCG01G001670 Citrullus lanatus
COL.COLO4_03427 Corchorus olitorius
COL.COLO4_10706 Corchorus olitorius
CsaV3_5G000560 Cucumis sativus L.
CSS0008906 Camellia sinensis var. sinensis
CSS0023187 Camellia sinensis var. sinensis
DCAR_006488 Daucus carota
DCAR_010606 Daucus carota
Dinv29295 Davidia involucrata
Dinv37531 Davidia involucrata
Dinv38829 Davidia involucrata
Duzib205G1876 Durio zibethinus
ECA240G0536 Erigeron canadensis
EL10Ac3g05304 Beta vulgaris
EL10Ac5g12918 Beta vulgaris
Eucgr.C00183 Eucalyptus grandis
Eucgr.E00869 Eucalyptus grandis
FAN01G1391 Fragaria x ananassa
FAN03G1224 Fragaria x ananassa
FAN04G1321 Fragaria x ananassa
FAN06G1266 Fragaria x ananassa
FAN06G1557 Fragaria x ananassa
FAN08G0063 Fragaria x ananassa
FAN10G0142 Fragaria x ananassa
FAN10G1914 Fragaria x ananassa
FAN13G0743 Fragaria x ananassa
FAN13G0943 Fragaria x ananassa
FAN18G0508 Fragaria x ananassa
FAN18G2387 Fragaria x ananassa
FvH4_5g04640 Fragaria vesca
FvH4_7g31780 Fragaria vesca
Glyma.01G225400 Glycine max
Glyma.11G017600 Glycine max
Gohir.A08G096024 Gossypium hirsutum
Gohir.A12G236600 Gossypium hirsutum
Gohir.D08G104000 Gossypium hirsutum
Gohir.D12G237800 Gossypium hirsutum
Gohir.D12G237933 Gossypium hirsutum
Gorai.004G111400 Gossypium raimondii
Gorai.008G254600 Gossypium raimondii
GSVIVG01019535001 Vitis vinifera
GSVIVG01038715001 Vitis vinifera
HanXRQChr03g0083481 Helianthus annuus
HanXRQChr13g0415281 Helianthus annuus
Haze_09066 Corylus avellana
Hma1.2p1_1461F.1_g285050 Hydrangea macrophylla
Hma1.2p1_2808F.1_g328863 Hydrangea macrophylla
HPP92_020160 Vanilla planifolia
HPP92_020177 Vanilla planifolia
Hund04853 Selenicereus undatus
Hund11389 Selenicereus undatus
Hund14219 Selenicereus undatus
Lalb_Chr05g0224141 Lupinus albus
Lj2A167G43 Lonicera japonica
Lj4g0013283 Lotus japonicus
LjContig00312_ERROPOS870357g0027890 Lotus japonicus
Manes.02G009700 Manihot esculenta
Manes.06G159300 Manihot esculenta
Mapoly0003s0162 Marchantia polymorpha
MBI06_g08462_MAGBIO Magnolia biondii
MD01G1219400 Malus domestica
MD06G1107200 Malus domestica
MD06G1107300 Malus domestica
Medtr8g099465 Medicago truncatula
MELO3C005880.2 Cucumis melo
Migut.A00641 Erythranthe guttata
Nn1g01872 Nelumbo nucifera
Nn3g19011 Nelumbo nucifera
Oeu054023.1 Olea europaea
Oeu063517.1 Olea europaea
Os06g0530200 Oryza sativa ssp. japonica
Peaxi162Scf00102g01842 Petunia axillaris
PGR042G1109 Punica granatum
PGR042G3499 Punica granatum
PGSC0003DMG400005791 Solanum tuberosum
PGSC0003DMG400012279 Solanum tuberosum
Phvul.002G164300 Phaseolus vulgaris
Phvul.002G298100 Phaseolus vulgaris
Potri.003G140300 Populus trichocarpa
Potri.012G011600 Populus trichocarpa
Prupe.2G311800 Prunus persica
Prupe.5G120400 Prunus persica
Psat7g025560 Pisum sativum
PSO063G6907 Papaver somniferum
QL02p030350 Quercus lobata
QL09p009613 Quercus lobata
RcHm_v2.0_Chr1g0381011 Rosa chinensis
RcHm_v2.0_Chr7g0194731 Rosa chinensis
Rhsim09G0205000 Rhododendron simsii
Sabra03G0101300 Salix brachista
SalBow1G2120 Salvia bowleyana
SalBow1G7115 Salvia bowleyana
Sc01g0010310 Simmondsia chinensis
Sc13g0009750 Simmondsia chinensis
Sed0004965 Sechium edule
Sed0007169 Sechium edule
Sed0015186 Sechium edule
SGA_v2.0_scaffold96G29014 Striga asiatica
Solyc08g008330.3 Solanum lycopersicum
Solyc08g082390.3 Solanum lycopersicum
Sopen08g004210 Solanum pennellii
Sopen08g030650 Solanum pennellii
Sp2g23150 Schrenkiella parvula
Sp7g21840 Schrenkiella parvula
TAR629G1304 Trochodendron aralioides
THA.LOC104815090 Tarenaya hassleriana
THA.LOC104821369 Tarenaya hassleriana
Thecc.03G195700 Theobroma cacao
Thecc.03G298400 Theobroma cacao
Thhalv10005218m.g Eutrema salsugineum
Thhalv10026982m.g Eutrema salsugineum
TPR.G25572 Trifolium pratense
TWI15G0384 Tripterygium wilfordii
TWI81G0780 Tripterygium wilfordii
unitig_88.g27640 Utricularia gibba
vmacro11468 Vaccinium macrocarpon
Zm00001eb277870 Zea mays
Zm00001eb383200 Zea mays

User provided reference genes

Program Settings