Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00610 Brassica napus
A10p33340 Brassica napus
Aa31LG1G22470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3974 Anthoceros agrestis
Actinidia16884 Actinidia chinensis
Actinidia27689 Actinidia chinensis
Ah.15g096470 Amaranthus hybridus
AL6G11540 Arabidopsis lyrata
Aqoxy3G02119 Aquilegia oxysepala
Aqoxy3G03929 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9T0Q39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D04R4W Arachis hypogaea
AT5G02280 Arabidopsis thaliana
ATR0564G175 Amborella trichopoda
AUR62000434 Chenopodium quinoa
AUR62006779 Chenopodium quinoa
BcaB01g06156 Brassica carinata
BcaB01g06221 Brassica carinata
BolC9t60158H Brassica oleracea
BraA10t45365Z Brassica rapa
C03p00880 Brassica napus
C09p74250 Brassica napus
CAN.G1076.45 Capsicum annuum
CANSAT54G1174 Cannabis sativa
CARHR211090 Cardamine hirsuta
Carub.0006s0112 Capsella rubella
Ca_05705_v3 Cicer arietinum L.
Ca_30743_v3 Cicer arietinum L.
CBR_g30870 Chara braunii
Cc02_g35390 Coffea canephora
CDE02G1414 Ceratophyllum demersum
CDE08G1157 Ceratophyllum demersum
Cfa006729 Carpinus fangiana
Ciclev10012951m.g Citrus clementina
CiPaw.07G032000 Carya illinoinensis
CiPaw.07G032200 Carya illinoinensis
CiPaw.07G032600 Carya illinoinensis
CiPaw.08G153400 Carya illinoinensis
ClCG02G014740 Citrullus lanatus
COL.COLO4_14791 Corchorus olitorius
Cpa.g.sc188.2 Carica papaya
Cre02.g077500 Chlamydomonas reinhardtii
CSS0015916 Camellia sinensis var. sinensis
CSS0016663 Camellia sinensis var. sinensis
CSS0022787 Camellia sinensis var. sinensis
CSS0043761 Camellia sinensis var. sinensis
CSS0046633 Camellia sinensis var. sinensis
DCAR_003336 Daucus carota
DCAR_022168 Daucus carota
DCAR_022169 Daucus carota
Dinv24482 Davidia involucrata
Dinv30922 Davidia involucrata
Duzib093G2058 Durio zibethinus
Duzib106G1933 Durio zibethinus
ECA236G0372 Erigeron canadensis
EL10Ac1g01013 Beta vulgaris
EL10Ac4g09510 Beta vulgaris
Eucgr.H04106 Eucalyptus grandis
FAN02G0090 Fragaria x ananassa
FAN05G0549 Fragaria x ananassa
FAN14G5596 Fragaria x ananassa
FvH4_6g08030 Fragaria vesca
Glyma.09G274900 Glycine max
Glyma.11G160100 Glycine max
Glyma.18G053900 Glycine max
Gohir.A05G345101 Gossypium hirsutum
Gohir.A09G155700 Gossypium hirsutum
Gohir.A10G132500 Gossypium hirsutum
Gohir.A11G126151 Gossypium hirsutum
Gohir.A11G213700 Gossypium hirsutum
Gohir.A11G326900 Gossypium hirsutum
Gohir.D03G049466 Gossypium hirsutum
Gohir.D05G370366 Gossypium hirsutum
Gohir.D06G130050 Gossypium hirsutum
Gohir.D07G166050 Gossypium hirsutum
Gohir.D08G273150 Gossypium hirsutum
Gohir.D09G151200 Gossypium hirsutum
Gohir.D10G086816 Gossypium hirsutum
Gohir.D11G186701 Gossypium hirsutum
Gohir.D11G230500 Gossypium hirsutum
Gohir.D12G239250 Gossypium hirsutum
Gohir.D13G093250 Gossypium hirsutum
Gorai.003G067000 Gossypium raimondii
Gorai.004G096700 Gossypium raimondii
Gorai.006G172500 Gossypium raimondii
Gorai.007G198600 Gossypium raimondii
Gorai.007G376100 Gossypium raimondii
Gorai.010G140600 Gossypium raimondii
Gorai.010G151900 Gossypium raimondii
Gorai.013G182400 Gossypium raimondii
Gorai.N004900 Gossypium raimondii
GSVIVG01031275001 Vitis vinifera
GSVIVG01031279001 Vitis vinifera
GSVIVG01031283001 Vitis vinifera
GSVIVG01031287001 Vitis vinifera
HanXRQChr01g0011571 Helianthus annuus
HanXRQChr05g0144301 Helianthus annuus
HanXRQChr12g0382401 Helianthus annuus
HanXRQChr14g0432401 Helianthus annuus
Haze_04031 Corylus avellana
Hma1.2p1_0052F.1_g030600 Hydrangea macrophylla
Hund21854 Selenicereus undatus
Lalb_Chr18g0054271 Lupinus albus
Lj3g0003008 Lotus japonicus
Lj6g0018597 Lotus japonicus
Lsat_1_v5_gn_4_12481 Lactuca sativa
Manes.08G080100 Manihot esculenta
Manes.09G093100 Manihot esculenta
Mapoly0130s0031 Marchantia polymorpha
MBI18_g27392_MAGBIO Magnolia biondii
MBI19_g32693_MAGBIO Magnolia biondii
MD12G1203200 Malus domestica
MD14G1013000 Malus domestica
Medtr5g075330 Medicago truncatula
Medtr8g103680 Medicago truncatula
MELO3C004163.2 Cucumis melo
Migut.B00856 Erythranthe guttata
MSTRG.16415 Avicennia marina
MSTRG.19613 Avicennia marina
Nitab4.5_0003044g0050 Nicotiana tabacum
Nitab4.5_0011298g0030 Nicotiana tabacum
Nitab4.5_0022238g0010 Nicotiana tabacum
Nn4g23875 Nelumbo nucifera
Nn6g34665 Nelumbo nucifera
Oeu024971.3 Olea europaea
Os06g0151300 Oryza sativa ssp. japonica
Os07g0454700 Oryza sativa ssp. japonica
Peaxi162Scf00357g00620 Petunia axillaris
Peaxi162Scf00672g00088 Petunia axillaris
PGR031G1682 Punica granatum
PGR083G0204 Punica granatum
PGSC0003DMG400002754 Solanum tuberosum
Phvul.006G077300 Phaseolus vulgaris
Potri.009G069800 Populus trichocarpa
Pp3c15_20530 Physcomitrium patens
Pp3c9_17970 Physcomitrium patens
PRCOL_00000225 Prasinoderma coloniale
Prupe.6G309100 Prunus persica
PSO541G2302 Papaver somniferum
PSO675G4097 Papaver somniferum
PSO724G1081 Papaver somniferum
PSO729G0122 Papaver somniferum
QL02p093330 Quercus lobata
QL03p017764 Quercus lobata
RcHm_v2.0_Chr2g0112131 Rosa chinensis
RcHm_v2.0_Chr3g0457701 Rosa chinensis
RcHm_v2.0_Chr4g0392831 Rosa chinensis
RcHm_v2.0_Chr4g0436621 Rosa chinensis
Rhsim11G0098900 Rhododendron simsii
Sabra09G0052700 Salix brachista
SalBow7G4079 Salvia bowleyana
Sc09g0002540 Simmondsia chinensis
Sed0010909 Sechium edule
SEGI_05351 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01982 Striga asiatica
SMO270G0009 Selaginella moellendorffii
Solyc01g100840.3 Solanum lycopersicum
Sopen01g044340 Solanum pennellii
Sp6g40170 Schrenkiella parvula
TAR362G0840 Trochodendron aralioides
THA.LOC104823263 Tarenaya hassleriana
THA.LOC104827016 Tarenaya hassleriana
Thecc.05G038900 Theobroma cacao
Thhalv10015468m.g Eutrema salsugineum
Thhalv10022901m.g Eutrema salsugineum
TPR.G18674 Trifolium pratense
TPR.G22016 Trifolium pratense
TWI53G0737 Tripterygium wilfordii
TWI74G0996 Tripterygium wilfordii
unitig_699.g19663 Utricularia gibba
vmacro01590 Vaccinium macrocarpon
VMungo0540G2486 Vigna mungo
Zm00001eb376880 Zea mays

User provided reference genes

Program Settings