Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01320 Brassica napus
A09p12360 Brassica napus
Aa31LG8G16450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis
Actinidia25240 Actinidia chinensis
AL3G48800 Arabidopsis lyrata
Aqoxy7G01162 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea
AT2G19450 Arabidopsis thaliana
ATR0789G051 Amborella trichopoda
Atru.chr7.1627 Acer truncatum
AUR62029034 Chenopodium quinoa
AUR62029035 Chenopodium quinoa
AUR62033935 Chenopodium quinoa
BcaB03g16730 Brassica carinata
BcaB07g31608 Brassica carinata
BcaC04g22852 Brassica carinata
BcaC06g36576 Brassica carinata
BolC7t40671H Brassica oleracea
BolC9t54364H Brassica oleracea
BraA07t27923Z Brassica rapa
BraA09t36880Z Brassica rapa
C07p02710 Brassica napus
C09p14580 Brassica napus
CAN.G1583.6 Capsicum annuum
CAN.G57.12 Capsicum annuum
CANSAT56G0725 Cannabis sativa
CARHR109890 Cardamine hirsuta
Carub.0003s3373 Capsella rubella
Ca_13125_v3 Cicer arietinum L.
Ca_21290_v3 Cicer arietinum L.
Cc06_g11620 Coffea canephora
CDE05G1317 Ceratophyllum demersum
CDE05G1467 Ceratophyllum demersum
Cfa003057 Carpinus fangiana
Cfa021676 Carpinus fangiana
Cfa024924 Carpinus fangiana
Cfa025900 Carpinus fangiana
Ciclev10008048m.g Citrus clementina
CiPaw.03G212500 Carya illinoinensis
CiPaw.04G147900 Carya illinoinensis
ClCG11G001680 Citrullus lanatus
COL.COLO4_18176 Corchorus olitorius
Cpa.g.sc737.2 Carica papaya
Cpa.g.sc737.3 Carica papaya
Cre01.g045903 Chlamydomonas reinhardtii
CsaV3_2G001380 Cucumis sativus L.
CSS0045629 Camellia sinensis var. sinensis
DCAR_011961 Daucus carota
DCAR_028272 Daucus carota
Dinv36786 Davidia involucrata
Dinv42339 Davidia involucrata
Duzib168G0739 Durio zibethinus
ECA234G2403 Erigeron canadensis
EL10Ac8g19178 Beta vulgaris
Eucgr.C03419 Eucalyptus grandis
FAN19G1831 Fragaria x ananassa
FAN23G0463 Fragaria x ananassa
FAN26G0253 Fragaria x ananassa
FAN26G3195 Fragaria x ananassa
FAN28G1686 Fragaria x ananassa
FAN28G2747 Fragaria x ananassa
FvH4_1g07910 Fragaria vesca
Glyma.09G065300 Glycine max
Glyma.13G106100 Glycine max
Glyma.15G171700 Glycine max
Glyma.17G053300 Glycine max
Gohir.A07G012600 Gossypium hirsutum
Gohir.D07G012400 Gossypium hirsutum
Gorai.001G013100 Gossypium raimondii
GSVIVG01015174001 Vitis vinifera
HanXRQChr03g0060291 Helianthus annuus
HanXRQChr10g0319461 Helianthus annuus
HanXRQChr12g0354671 Helianthus annuus
Haze_25938 Corylus avellana
Haze_27058 Corylus avellana
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla
HPP92_003981 Vanilla planifolia
HPP92_005224 Vanilla planifolia
Hund06663 Selenicereus undatus
Hund25994 Selenicereus undatus
Lalb_Chr08g0232371 Lupinus albus
Lalb_Chr11g0074511 Lupinus albus
Lalb_Chr11g0074521 Lupinus albus
Lalb_Chr11g0074531 Lupinus albus
Lalb_Chr13g0299591 Lupinus albus
Lj4C291G3 Lonicera japonica
Lj4g0002498 Lotus japonicus
Lj6g0011849 Lotus japonicus
Lj7C679G4 Lonicera japonica
Lsat_1_v5_gn_5_143061 Lactuca sativa
Manes.03G036000 Manihot esculenta
Manes.16G100000 Manihot esculenta
Mapoly0012s0121 Marchantia polymorpha
MD02G1082600 Malus domestica
MD15G1210700 Malus domestica
Medtr2g039940 Medicago truncatula
Medtr4g125980 Medicago truncatula
MELO3C004632.2 Cucumis melo
Migut.J00573 Erythranthe guttata
MSTRG.19492 Avicennia marina
Nitab4.5_0001519g0080 Nicotiana tabacum
Nitab4.5_0002642g0100 Nicotiana tabacum
Nitab4.5_0002824g0090 Nicotiana tabacum
Nitab4.5_0009216g0010 Nicotiana tabacum
Nn6g35535 Nelumbo nucifera
Oeu032802.1 Olea europaea
Oeu051295.1 Olea europaea
Oeu054835.1 Olea europaea
Os05g0196800 Oryza sativa ssp. japonica
Os06g0563900 Oryza sativa ssp. japonica
Peaxi162Scf00126g01016 Petunia axillaris
Peaxi162Scf00126g01028 Petunia axillaris
Peaxi162Scf00494g00077 Petunia axillaris
Peaxi162Scf00498g00448 Petunia axillaris
PGR142G2341 Punica granatum
PGSC0003DMG400000274 Solanum tuberosum
PGSC0003DMG400032788 Solanum tuberosum
PGSC0003DMG400032789 Solanum tuberosum
Phvul.003G134900 Phaseolus vulgaris
Phvul.009G230700 Phaseolus vulgaris
Potri.006G147600 Populus trichocarpa
Potri.018G066100 Populus trichocarpa
Pp3c15_23830 Physcomitrium patens
Pp3c9_24440 Physcomitrium patens
PRCOL_00002371 Prasinoderma coloniale
Prupe.7G206100 Prunus persica
Psat1g132200 Pisum sativum
Psat7g044040 Pisum sativum
PSO063G3240 Papaver somniferum
PSO210G1704 Papaver somniferum
PSO210G6497 Papaver somniferum
PSO765G0232 Papaver somniferum
PSO832G2139 Papaver somniferum
QL02p062121 Quercus lobata
RcHm_v2.0_Chr2g0093781 Rosa chinensis
Rhsim05G0016600 Rhododendron simsii
Sabra06G0116600 Salix brachista
Sabra18G0058500 Salix brachista
Sabra18G0058600 Salix brachista
SalBow6G0873 Salvia bowleyana
Sc08g0008580 Simmondsia chinensis
Sc18g0002260 Simmondsia chinensis
Sed0015499 Sechium edule
SEGI_28032 Sequoiadendron giganteum
SGA_v2.0_scaffold91G28060 Striga asiatica
SMO356G0470 Selaginella moellendorffii
SMO361G0462 Selaginella moellendorffii
Solyc07g040740.3 Solanum lycopersicum
Solyc12g008970.3 Solanum lycopersicum
Sopen07g019480 Solanum pennellii
Sopen12g003900 Solanum pennellii
Sp3g32820 Schrenkiella parvula
TAR624G0704 Trochodendron aralioides
TAR636G2477 Trochodendron aralioides
THA.LOC104814629 Tarenaya hassleriana
Thecc.09G085400 Theobroma cacao
Thhalv10022645m.g Eutrema salsugineum
TPR.G29533 Trifolium pratense
TPR.G9438 Trifolium pratense
TWI32G1194 Tripterygium wilfordii
TWI63G1034 Tripterygium wilfordii
unitig_8.g4318 Utricularia gibba
vmacro17139 Vaccinium macrocarpon
VMungo1215G0315 Vigna mungo
VMungo1309G0638 Vigna mungo
Zm00001eb277490 Zea mays
Zm00001eb284200 Zea mays

User provided reference genes

Program Settings