Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p18110 Brassica napus
Aa31LG4G18100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5195 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5201 Anthoceros agrestis
Actinidia12476 Actinidia chinensis
Ah.10g033610 Amaranthus hybridus
Ah.11g044190 Amaranthus hybridus
AL5G29450 Arabidopsis lyrata
Aqoxy7G02570 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1H4CIU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EPLR59 Arachis hypogaea
AT3G49601 Arabidopsis thaliana
ATR0665G238 Amborella trichopoda
ATR0665G601 Amborella trichopoda
Atru.chr4.1391 Acer truncatum
AUR62020692 Chenopodium quinoa
AUR62028033 Chenopodium quinoa
BcaB01g00690 Brassica carinata
BcaC01g02423 Brassica carinata
BcaC07g39425 Brassica carinata
BcaC09g49964 Brassica carinata
BolC1t03005H Brassica oleracea
BolC3t18797H Brassica oleracea
BolC8t50077H Brassica oleracea
BraA06t24900Z Brassica rapa
C01p30700 Brassica napus
C03p65450 Brassica napus
C08p24610 Brassica napus
CAN.G195.14 Capsicum annuum
CANSAT21G2467 Cannabis sativa
CARHR158630 Cardamine hirsuta
CARHR261000 Cardamine hirsuta
Carub.0005s1594 Capsella rubella
Ca_11409_v3 Cicer arietinum L.
Ca_11411_v3 Cicer arietinum L.
Ca_12887_v3 Cicer arietinum L.
CBR_g88579 Chara braunii
Cc03_g09420 Coffea canephora
CDE07G1163 Ceratophyllum demersum
Cfa024514 Carpinus fangiana
Ciclev10007432m.g Citrus clementina
CiPaw.07G050600 Carya illinoinensis
CiPaw.07G215400 Carya illinoinensis
ClCG08G012810 Citrullus lanatus
COL.COLO4_09287 Corchorus olitorius
Cpa.g.c48129 Carica papaya
Cpa.g.sc117.15 Carica papaya
Cre09.g409200 Chlamydomonas reinhardtii
CsaV3_2G031560 Cucumis sativus L.
CSS0017741 Camellia sinensis var. sinensis
CSS0020148 Camellia sinensis var. sinensis
DCAR_000724 Daucus carota
DCAR_004521 Daucus carota
Dinv19111 Davidia involucrata
Duzib106G1246 Durio zibethinus
Duzib128G1534 Durio zibethinus
ECA234G4028 Erigeron canadensis
EL10Ac2g03659 Beta vulgaris
Eucgr.H02470 Eucalyptus grandis
FAN15G2764 Fragaria x ananassa
FAN20G2913 Fragaria x ananassa
FAN24G0669 Fragaria x ananassa
FAN27G0182 Fragaria x ananassa
FvH4_2g30620 Fragaria vesca
Glyma.11G174282 Glycine max
Glyma.14G131900 Glycine max
Glyma.17G200600 Glycine max
Gohir.A06G171302 Gossypium hirsutum
Gohir.A06G171600 Gossypium hirsutum
Gohir.D06G179300 Gossypium hirsutum
Gohir.D06G179400 Gossypium hirsutum
Gohir.D06G179700 Gossypium hirsutum
Gorai.010G209300 Gossypium raimondii
Gorai.010G209900 Gossypium raimondii
Gorai.010G210000 Gossypium raimondii
Gorai.010G210300 Gossypium raimondii
Gorai.010G210700 Gossypium raimondii
Gorai.010G211700 Gossypium raimondii
GSVIVG01035595001 Vitis vinifera
HanXRQChr10g0299041 Helianthus annuus
Hund03240 Selenicereus undatus
Lalb_Chr11g0064071 Lupinus albus
Lalb_Chr23g0268921 Lupinus albus
Lj1g0018267 Lotus japonicus
Lj8C415T1 Lonicera japonica
Lj8C415T2 Lonicera japonica
Lj8C419G2 Lonicera japonica
Lsat_1_v5_gn_4_74560 Lactuca sativa
Manes.03G046500 Manihot esculenta
Manes.07G111004 Manihot esculenta
Mapoly0018s0007 Marchantia polymorpha
Mapoly0057s0051 Marchantia polymorpha
Mapoly0057s0059 Marchantia polymorpha
MBI11_g09070_MAGBIO Magnolia biondii
MCO09G628 Micromonas commoda
MD08G1133100 Malus domestica
MD15G1110900 Malus domestica
MD15G1111100 Malus domestica
Medtr1g010090 Medicago truncatula
Medtr1g010100 Medicago truncatula
MELO3C011205.2 Cucumis melo
Migut.A00845 Erythranthe guttata
Migut.A00847 Erythranthe guttata
Migut.E01401 Erythranthe guttata
Nitab4.5_0000288g0130 Nicotiana tabacum
Nitab4.5_0000648g0040 Nicotiana tabacum
Nitab4.5_0008752g0030 Nicotiana tabacum
Nn5g27656 Nelumbo nucifera
Nn8g41252 Nelumbo nucifera
Oeu026036.1 Olea europaea
Peaxi162Scf00213g01515 Petunia axillaris
PGR119G2538 Punica granatum
PGSC0003DMG401029567 Solanum tuberosum
Phvul.001G088700 Phaseolus vulgaris
Phvul.006G038644 Phaseolus vulgaris
Phvul.006G038688 Phaseolus vulgaris
Potri.006G233000 Populus trichocarpa
Pp3c13_11540 Physcomitrium patens
Pp3c3_10000 Physcomitrium patens
PRCOL_00006922 Prasinoderma coloniale
Prupe.1G463200 Prunus persica
Psat6g031640 Pisum sativum
PSO210G2134 Papaver somniferum
PSO439G0001 Papaver somniferum
PSO541G4756 Papaver somniferum
PSO832G4585 Papaver somniferum
QL12p024601 Quercus lobata
RcHm_v2.0_Chr4g0410401 Rosa chinensis
RcHm_v2.0_Chr6g0312381 Rosa chinensis
Rhsim07G0241300 Rhododendron simsii
RhsimUnG0236200 Rhododendron simsii
Sabra06G0181500 Salix brachista
SalBow7G2142 Salvia bowleyana
SalBow8G3032 Salvia bowleyana
Sc06g0000040 Simmondsia chinensis
Sc06g0001360 Simmondsia chinensis
Sed0021561 Sechium edule
SEGI_30814 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36327 Striga asiatica
SGA_v2.0_scaffold7G03771 Striga asiatica
Solyc08g074440.4 Solanum lycopersicum
Sopen08g023080 Solanum pennellii
Sp5g12500 Schrenkiella parvula
TAR383G1094 Trochodendron aralioides
TAR626G1323 Trochodendron aralioides
TAR626G1378 Trochodendron aralioides
THA.LOC104799001 Tarenaya hassleriana
THA.LOC109116738 Tarenaya hassleriana
Thecc.09G051000 Theobroma cacao
Thecc.10G127600 Theobroma cacao
Thecc.10G128100 Theobroma cacao
Thecc.10G128300 Theobroma cacao
Thhalv10010217m.g Eutrema salsugineum
TPR.G10377 Trifolium pratense
TPR.G10966 Trifolium pratense
TPR.G14045 Trifolium pratense
TPR.G20436 Trifolium pratense
TPR.G211 Trifolium pratense
TWI15G0012 Tripterygium wilfordii
TWI60G0712 Tripterygium wilfordii
vmacro00640 Vaccinium macrocarpon
VMungo1383G3608 Vigna mungo
Zm00001eb204710 Zea mays
Zm00001eb204730 Zea mays
Zm00001eb204750 Zea mays
Zm00001eb204760 Zea mays
Zm00001eb204770 Zea mays
Zm00001eb204790 Zea mays
Zm00001eb204800 Zea mays
Zm00001eb204810 Zea mays
Zm00001eb204820 Zea mays
Zm00001eb204830 Zea mays
Zm00001eb344480 Zea mays
Zm00001eb357810 Zea mays

User provided reference genes

Program Settings