Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37190 Brassica napus
A03p06250 Brassica napus
A06p39450 Brassica napus
A09p04290 Brassica napus
A10p24480 Brassica napus
Aa31LG3G14220 Aethionema arabicum
Ah.16g104320 Amaranthus hybridus
AL6G24520 Arabidopsis lyrata
AL8G19920 Arabidopsis lyrata
Aqoxy3G01771 Aquilegia oxysepala
AT5G13880 Arabidopsis thaliana
AT5G47920 Arabidopsis thaliana
ATR0582G327 Amborella trichopoda
Atru.chr12.1473 Acer truncatum
Atru.chr6.2731 Acer truncatum
AUR62012365 Chenopodium quinoa
AUR62031493 Chenopodium quinoa
BcaB01g05331 Brassica carinata
BcaB04g19545 Brassica carinata
BcaB07g29998 Brassica carinata
BcaC03g17621 Brassica carinata
BcaC04g19071 Brassica carinata
BcaC04g23799 Brassica carinata
BcaC04g24246 Brassica carinata
BcaC06g30835 Brassica carinata
BolC2t11677H Brassica oleracea
BolC3t13225H Brassica oleracea
BolC7t44401H Brassica oleracea
BolC9t53384H Brassica oleracea
BolC9t59158H Brassica oleracea
BraA02t08705Z Brassica rapa
BraA03t09957Z Brassica rapa
BraA06t26860Z Brassica rapa
BraA09t36066Z Brassica rapa
BraA10t44513Z Brassica rapa
C02p56210 Brassica napus
C03p07240 Brassica napus
C07p38820 Brassica napus
C09p04550 Brassica napus
C09p63220 Brassica napus
CAN.G1588.13 Capsicum annuum
CANSAT64G1067 Cannabis sativa
CARHR199550 Cardamine hirsuta
CARHR291780 Cardamine hirsuta
Carub.0006s1207 Capsella rubella
Carub.0008s0748 Capsella rubella
Ca_08235_v3 Cicer arietinum L.
Cc02_g30640 Coffea canephora
CDE02G1703 Ceratophyllum demersum
CDE04G0163 Ceratophyllum demersum
CDE05G3127 Ceratophyllum demersum
CDE06G1383 Ceratophyllum demersum
CDE07G0150 Ceratophyllum demersum
Cfa007136 Carpinus fangiana
Cfa009471 Carpinus fangiana
Ciclev10016691m.g Citrus clementina
Ciclev10030001m.g Citrus clementina
CiPaw.05G098500 Carya illinoinensis
CiPaw.06G111200 Carya illinoinensis
CiPaw.14G093600 Carya illinoinensis
ClCG05G012460 Citrullus lanatus
ClCG10G013010 Citrullus lanatus
COL.COLO4_07108 Corchorus olitorius
COL.COLO4_13404 Corchorus olitorius
Cpa.g.sc686.1 Carica papaya
Cpa.g.sc70.36 Carica papaya
CsaV3_3G020070 Cucumis sativus L.
CsaV3_3G032870 Cucumis sativus L.
CSS0018669 Camellia sinensis var. sinensis
DCAR_031611 Daucus carota
Dinv06937 Davidia involucrata
Duzib187G1305 Durio zibethinus
EL10Ac2g04246 Beta vulgaris
Eucgr.B03568 Eucalyptus grandis
Eucgr.G01911 Eucalyptus grandis
Eucgr.I01568 Eucalyptus grandis
FAN07G2708 Fragaria x ananassa
FAN12G1550 Fragaria x ananassa
FAN17G1354 Fragaria x ananassa
FvH4_4g22190 Fragaria vesca
Glyma.02G068200 Glycine max
Glyma.16G045200 Glycine max
Glyma.19G106500 Glycine max
Gohir.A03G073400 Gossypium hirsutum
Gohir.A09G002600 Gossypium hirsutum
Gohir.A12G141800 Gossypium hirsutum
Gohir.D03G099900 Gossypium hirsutum
Gohir.D09G002400 Gossypium hirsutum
Gohir.D12G146700 Gossypium hirsutum
Gorai.003G105000 Gossypium raimondii
Gorai.006G002900 Gossypium raimondii
Gorai.008G157900 Gossypium raimondii
GSVIVG01001118001 Vitis vinifera
GSVIVG01032947001 Vitis vinifera
HanXRQChr10g0319941 Helianthus annuus
Haze_12527 Corylus avellana
Haze_14987 Corylus avellana
Hma1.2p1_0738F.1_g210940 Hydrangea macrophylla
HPP92_025084 Vanilla planifolia
Lalb_Chr14g0364131 Lupinus albus
Lalb_Chr21g0317001 Lupinus albus
Lalb_Chr24g0402991 Lupinus albus
Lj1g0002386 Lotus japonicus
Manes.04G096800 Manihot esculenta
Manes.08G099400 Manihot esculenta
Manes.11G073200 Manihot esculenta
MBI07_g42011_MAGBIO Magnolia biondii
MBI11_g23197_MAGBIO Magnolia biondii
MD13G1134000 Malus domestica
MD16G1144600 Malus domestica
MD17G1003900 Malus domestica
Medtr7g084710 Medicago truncatula
Medtr7g084720 Medicago truncatula
Medtr7g084740 Medicago truncatula
MELO3C014757.2 Cucumis melo
MELO3C026747.2 Cucumis melo
Migut.F00001 Erythranthe guttata
Migut.K01132 Erythranthe guttata
Nitab4.5_0002182g0030 Nicotiana tabacum
Nitab4.5_0019080g0010 Nicotiana tabacum
Nn3g16207 Nelumbo nucifera
Oeu010264.1 Olea europaea
Oeu035281.1 Olea europaea
Os02g0505500 Oryza sativa ssp. japonica
Os04g0382400 Oryza sativa ssp. japonica
Peaxi162Scf00047g00153 Petunia axillaris
PGR042G1501 Punica granatum
PGR102G1502 Punica granatum
PGR119G1683 Punica granatum
PGSC0003DMG400011591 Solanum tuberosum
Phvul.001G098500 Phaseolus vulgaris
Phvul.004G067800 Phaseolus vulgaris
Potri.003G160300 Populus trichocarpa
Potri.014G140000 Populus trichocarpa
Prupe.1G211600 Prunus persica
Prupe.3G315300 Prunus persica
Psat3g089920 Pisum sativum
Psat3g090520 Pisum sativum
Psat3g090560 Pisum sativum
PSO017G5432 Papaver somniferum
PSO478G3045 Papaver somniferum
QL02p068241 Quercus lobata
QL03p048351 Quercus lobata
RcHm_v2.0_Chr4g0428421 Rosa chinensis
Rhsim08G0037500 Rhododendron simsii
Rhsim12G0091100 Rhododendron simsii
Sabra01G0049400 Salix brachista
Sabra03G0116500 Salix brachista
Sc11g0000030 Simmondsia chinensis
Sed0004494 Sechium edule
Sed0011010 Sechium edule
SEGI_09260 Sequoiadendron giganteum
SEGI_35194 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45761 Striga asiatica
SHI11395 Sapria himalayana
Solyc09g091270.3 Solanum lycopersicum
Sopen09g034240 Solanum pennellii
Sp2g18420 Schrenkiella parvula
Sp6g30120 Schrenkiella parvula
TAR374G0420 Trochodendron aralioides
THA.LOC104801433 Tarenaya hassleriana
THA.LOC104823341 Tarenaya hassleriana
THA.LOC104827510 Tarenaya hassleriana
Thecc.01G239800 Theobroma cacao
Thecc.04G052000 Theobroma cacao
Thhalv10005412m.g Eutrema salsugineum
Thhalv10014767m.g Eutrema salsugineum
TPR.G31659 Trifolium pratense
TPR.G31663 Trifolium pratense
TWI12G1264 Tripterygium wilfordii
TWI75G0895 Tripterygium wilfordii
VMungo1302G0001 Vigna mungo
Zm00001eb085640 Zea mays
Zm00001eb181000 Zea mays

User provided reference genes

Program Settings