Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p04210 Brassica napus
A09p52260 Brassica napus
Aa31LG10G14160 Aethionema arabicum
Aa31LG1G25740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.984 Anthoceros agrestis
Actinidia18385 Actinidia chinensis
Actinidia34559 Actinidia chinensis
Ah.07g203340 Amaranthus hybridus
Ah.13g073130 Amaranthus hybridus
AL4G42970 Arabidopsis lyrata
AL5G42070 Arabidopsis lyrata
Aqoxy2G04186 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7FI9ND Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BTB9WU Arachis hypogaea
AT2G44090 Arabidopsis thaliana
AT3G59910 Arabidopsis thaliana
ATR0115G008 Amborella trichopoda
ATR0225G045 Amborella trichopoda
ATR0624G069 Amborella trichopoda
ATR0665G114 Amborella trichopoda
ATR0693G327 Amborella trichopoda
ATR0743G108 Amborella trichopoda
Atru.chr3.1959 Acer truncatum
AUR62002499 Chenopodium quinoa
AUR62023688 Chenopodium quinoa
BcaB02g08921 Brassica carinata
BcaB02g10668 Brassica carinata
BcaC02g07135 Brassica carinata
BcaC02g12341 Brassica carinata
BcaC07g40397 Brassica carinata
BcaC07g40545 Brassica carinata
BolC4t22128H Brassica oleracea
BolC8t51093H Brassica oleracea
BraA05t19406Z Brassica rapa
BraA09t40655Z Brassica rapa
C04p04970 Brassica napus
C08p34910 Brassica napus
CAN.G68.3 Capsicum annuum
CANSAT56G2502 Cannabis sativa
CARHR139240 Cardamine hirsuta
CARHR147080 Cardamine hirsuta
CARHR170240 Cardamine hirsuta
Carub.0004s2664 Capsella rubella
Carub.0005s2665 Capsella rubella
Ca_13541_v3 Cicer arietinum L.
CBR_g40501 Chara braunii
Cc03_g15890 Coffea canephora
Cc03_g15910 Coffea canephora
CDE02G2909 Ceratophyllum demersum
CDE08G0097 Ceratophyllum demersum
CDE09G0082 Ceratophyllum demersum
Cfa008534 Carpinus fangiana
Ciclev10019310m.g Citrus clementina
CiPaw.01G203200 Carya illinoinensis
CiPaw.02G125700 Carya illinoinensis
ClCG08G010220 Citrullus lanatus
COL.COLO4_14407 Corchorus olitorius
Cpa.g.sc9.239 Carica papaya
CsaV3_6G032420 Cucumis sativus L.
DCAR_023794 Daucus carota
Dinv24739 Davidia involucrata
Dinv33253 Davidia involucrata
Duzib093G1419 Durio zibethinus
Duzib106G0840 Durio zibethinus
ECA248G0282 Erigeron canadensis
EL10Ac3g06184 Beta vulgaris
Eucgr.A00409 Eucalyptus grandis
FAN23G0195 Fragaria x ananassa
FAN23G2340 Fragaria x ananassa
FAN26G0143 Fragaria x ananassa
FAN28G1790 Fragaria x ananassa
FvH4_1g00080 Fragaria vesca
FvH4_5g21451 Fragaria vesca
FvH4_6g21450 Fragaria vesca
Glyma.07G273900 Glycine max
Glyma.17G000500 Glycine max
Gohir.A13G079100 Gossypium hirsutum
Gohir.D13G095500 Gossypium hirsutum
Gorai.001G247600 Gossypium raimondii
GSVIVG01038267001 Vitis vinifera
HanXRQChr01g0023591 Helianthus annuus
Haze_11105 Corylus avellana
Hma1.2p1_0513F.1_g169760 Hydrangea macrophylla
HPP92_001964 Vanilla planifolia
HPP92_004656 Vanilla planifolia
Hund12302 Selenicereus undatus
Lalb_Chr13g0304471 Lupinus albus
Lj4g0009662 Lotus japonicus
Lj6A289T17 Lonicera japonica
Lsat_1_v5_gn_1_77161 Lactuca sativa
Manes.01G009451 Manihot esculenta
Mapoly0053s0086 Marchantia polymorpha
MBI07_g27881_MAGBIO Magnolia biondii
MBI10_g31866_MAGBIO Magnolia biondii
MD01G1124800 Malus domestica
MD02G1000800 Malus domestica
MD15G1142000 Malus domestica
Medtr4g134960 Medicago truncatula
MELO3C011438.2 Cucumis melo
Migut.G00797 Erythranthe guttata
Migut.N03013 Erythranthe guttata
Migut.O00491 Erythranthe guttata
MSTRG.22058 Avicennia marina
MSTRG.24543 Avicennia marina
Nitab4.5_0000219g0020 Nicotiana tabacum
Nitab4.5_0000348g0080 Nicotiana tabacum
Nitab4.5_0008814g0010 Nicotiana tabacum
Nitab4.5_0012258g0010 Nicotiana tabacum
Nn1g09401 Nelumbo nucifera
Nn7g37426 Nelumbo nucifera
Oeu023156.1 Olea europaea
Oeu050303.2 Olea europaea
Oeu061885.1 Olea europaea
Os02g0562400 Oryza sativa ssp. japonica
Os11g0246900 Oryza sativa ssp. japonica
Peaxi162Scf00057g00179 Petunia axillaris
Peaxi162Scf01205g00162 Petunia axillaris
PGR042G1685 Punica granatum
PGSC0003DMG400013719 Solanum tuberosum
PGSC0003DMG401006465 Solanum tuberosum
PGSC0003DMG402006465 Solanum tuberosum
Phvul.003G074400 Phaseolus vulgaris
Potri.007G146500 Populus trichocarpa
Potri.017G001300 Populus trichocarpa
Pp3c10_11360 Physcomitrium patens
Pp3c14_7650 Physcomitrium patens
Pp3c1_34260 Physcomitrium patens
Pp3c1_7290 Physcomitrium patens
Pp3c20_17330 Physcomitrium patens
Pp3c23_11480 Physcomitrium patens
Pp3c23_5610 Physcomitrium patens
Pp3c24_10000 Physcomitrium patens
Pp3c7_14020 Physcomitrium patens
Prupe.7G271200 Prunus persica
Psat4g001200 Pisum sativum
PSO170G2946 Papaver somniferum
PSO357G0424 Papaver somniferum
QL10p064923 Quercus lobata
RcHm_v2.0_Chr2g0084351 Rosa chinensis
Rhsim09G0001600 Rhododendron simsii
Rhsim09G0010000 Rhododendron simsii
Sabra07G0114900 Salix brachista
SalBow3G0041 Salvia bowleyana
SalBow6G2055 Salvia bowleyana
Sc19g0002460 Simmondsia chinensis
Sed0003085 Sechium edule
SEGI_02142 Sequoiadendron giganteum
SEGI_20459 Sequoiadendron giganteum
SGA_v2.0_scaffold158G37520 Striga asiatica
SGA_v2.0_scaffold18G08543 Striga asiatica
SGA_v2.0_scaffold19G08904 Striga asiatica
SGA_v2.0_scaffold20G09225 Striga asiatica
SHI01462 Sapria himalayana
SMO266G0055 Selaginella moellendorffii
SMO361G0247 Selaginella moellendorffii
Solyc08g015780.3 Solanum lycopersicum
Solyc12g017540.2 Solanum lycopersicum
Sopen08g005950 Solanum pennellii
Sopen12g008310 Solanum pennellii
Sp4g26170 Schrenkiella parvula
Sp5g03260 Schrenkiella parvula
TAR365G0572 Trochodendron aralioides
TAR636G2134 Trochodendron aralioides
THA.LOC104802352 Tarenaya hassleriana
Thecc.05G000500 Theobroma cacao
Thhalv10001361m.g Eutrema salsugineum
Thhalv10005846m.g Eutrema salsugineum
TPR.G5970 Trifolium pratense
TWI63G0698 Tripterygium wilfordii
unitig_27.g25138 Utricularia gibba
vmacro00732 Vaccinium macrocarpon
VMungo1215G2173 Vigna mungo
Zm00001eb168270 Zea mays
Zm00001eb244150 Zea mays

User provided reference genes

Program Settings