Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24640 Brassica napus
A04p33160 Brassica napus
Aa31LG10G14130 Aethionema arabicum
Aa31LG1G25710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3736 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis
Actinidia11426 Actinidia chinensis
Actinidia14627 Actinidia chinensis
Actinidia39245 Actinidia chinensis
Ah.04g165670 Amaranthus hybridus
Ah.06g182910 Amaranthus hybridus
AL4G42910 Arabidopsis lyrata
AL5G42050 Arabidopsis lyrata
Aqoxy2G03110 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea
AT2G44040 Arabidopsis thaliana
AT3G59890 Arabidopsis thaliana
ATR0716G071 Amborella trichopoda
ATR0743G110 Amborella trichopoda
Atru.chr12.1746 Acer truncatum
AUR62016240 Chenopodium quinoa
AUR62028616 Chenopodium quinoa
AUR62032340 Chenopodium quinoa
AUR62032781 Chenopodium quinoa
BcaB01g03335 Brassica carinata
BcaB01g03344 Brassica carinata
BcaB06g29352 Brassica carinata
BcaB06g29511 Brassica carinata
BcaC01g05190 Brassica carinata
BcaC02g07140 Brassica carinata
BolC3t15285H Brassica oleracea
BolC4t28586H Brassica oleracea
BraA03t11670Z Brassica rapa
BraA04t18775Z Brassica rapa
C03p29380 Brassica napus
C04p70860 Brassica napus
CAN.G1019.1 Capsicum annuum
CAN.G134.227 Capsicum annuum
CANSAT01G0494 Cannabis sativa
CARHR139200 Cardamine hirsuta
CARHR170220 Cardamine hirsuta
Carub.0004s2659 Capsella rubella
Carub.0005s2663 Capsella rubella
Ca_23565_v3 Cicer arietinum L.
CBR_g41668 Chara braunii
Cc03_g11000 Coffea canephora
CDE02G2837 Ceratophyllum demersum
CDE05G0441 Ceratophyllum demersum
Cfa008527 Carpinus fangiana
Ciclev10020914m.g Citrus clementina
CiPaw.01G202600 Carya illinoinensis
ClCG09G010780 Citrullus lanatus
COL.COLO4_19183 Corchorus olitorius
Cpa.g.sc182.24 Carica papaya
Cre14.g627850 Chlamydomonas reinhardtii
Cre16.g656300 Chlamydomonas reinhardtii
CsaV3_7G021780 Cucumis sativus L.
CSS0028639 Camellia sinensis var. sinensis
DCAR_002599 Daucus carota
Dinv24475 Davidia involucrata
Duzib093G0613 Durio zibethinus
Duzib128G0968 Durio zibethinus
ECA246G0926 Erigeron canadensis
EL10Ac2g02395 Beta vulgaris
EL10Ac6g13735 Beta vulgaris
FAN19G0379 Fragaria x ananassa
FAN20G0369 Fragaria x ananassa
FAN24G1991 Fragaria x ananassa
FvH4_2g00280 Fragaria vesca
FvH4_2g00630 Fragaria vesca
FvH4_2g00640 Fragaria vesca
Glyma.07G060300 Glycine max
Glyma.16G028900 Glycine max
Gohir.A07G173900 Gossypium hirsutum
Gohir.A11G301700 Gossypium hirsutum
Gohir.D07G181200 Gossypium hirsutum
Gohir.D09G124433 Gossypium hirsutum
Gohir.D11G316700 Gossypium hirsutum
Gohir.D11G317300 Gossypium hirsutum
Gorai.001G202100 Gossypium raimondii
Gorai.006G143300 Gossypium raimondii
Gorai.007G347100 Gossypium raimondii
GSVIVG01038260001 Vitis vinifera
HanXRQChr02g0032821 Helianthus annuus
HanXRQChr05g0133541 Helianthus annuus
Haze_11114 Corylus avellana
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla
HPP92_022643 Vanilla planifolia
Hund02101 Selenicereus undatus
Hund23277 Selenicereus undatus
Lalb_Chr10g0100171 Lupinus albus
Lj3g0014190 Lotus japonicus
Lj6C283G4 Lonicera japonica
Lju470A2T32 Lonicera japonica
Lsat_1_v5_gn_3_17660 Lactuca sativa
Manes.05G207900 Manihot esculenta
Mapoly0033s0134 Marchantia polymorpha
MBI01_g38182_MAGBIO Magnolia biondii
MBI18_g24142_MAGBIO Magnolia biondii
MCO16G413 Micromonas commoda
MD02G1000400 Malus domestica
MD15G1142500 Malus domestica
Medtr8g028145 Medicago truncatula
MELO3C013171.2 Cucumis melo
Migut.M00539 Erythranthe guttata
Migut.M01184 Erythranthe guttata
MSTRG.7308 Avicennia marina
Nitab4.5_0000245g0260 Nicotiana tabacum
Nitab4.5_0001165g0010 Nicotiana tabacum
Nn048s41912 Nelumbo nucifera
Nn048s41913 Nelumbo nucifera
Nn1g07592 Nelumbo nucifera
Nn3g17600 Nelumbo nucifera
Oeu016121.2 Olea europaea
Oeu050828.1 Olea europaea
Os02g0436400 Oryza sativa ssp. japonica
Os03g0245100 Oryza sativa ssp. japonica
Peaxi162Scf00071g00719 Petunia axillaris
Peaxi162Scf00434g00730 Petunia axillaris
Peaxi162Scf00434g00733 Petunia axillaris
Peaxi162Scf00434g00740 Petunia axillaris
Peaxi162Scf00609g00310 Petunia axillaris
PGR042G3458 Punica granatum
PGSC0003DMG400028592 Solanum tuberosum
Phvul.001G003100 Phaseolus vulgaris
Phvul.010G108900 Phaseolus vulgaris
Potri.007G145900 Populus trichocarpa
Potri.017G001900 Populus trichocarpa
Pp3c15_7380 Physcomitrium patens
PRCOL_00006631 Prasinoderma coloniale
Prupe.6G152500 Prunus persica
Prupe.7G270700 Prunus persica
Psat4g089800 Pisum sativum
PSO339G4618 Papaver somniferum
PSO384G4791 Papaver somniferum
PSO451G0001 Papaver somniferum
PSO541G3258 Papaver somniferum
PSO675G6334 Papaver somniferum
QL05p043656 Quercus lobata
QL10p064641 Quercus lobata
QL10p065764 Quercus lobata
RcHm_v2.0_Chr2g0084421 Rosa chinensis
RcHm_v2.0_Chr2g0126841 Rosa chinensis
RhsimUnG0159300 Rhododendron simsii
Sabra17G0005900 Salix brachista
SalBow8G4021 Salvia bowleyana
Sc06g0007930 Simmondsia chinensis
Sed0007542 Sechium edule
Sed0020358 Sechium edule
SEGI_29918 Sequoiadendron giganteum
SEGI_36179 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09788 Striga asiatica
SMO347G0499 Selaginella moellendorffii
Solyc01g098380.4 Solanum lycopersicum
Sopen01g041950 Solanum pennellii
Sp4g26120 Schrenkiella parvula
TAR636G3090 Trochodendron aralioides
THA.LOC104804380 Tarenaya hassleriana
Thecc.01G117800 Theobroma cacao
Thecc.05G172500 Theobroma cacao
Thhalv10001534m.g Eutrema salsugineum
Thhalv10006083m.g Eutrema salsugineum
TPR.G5068 Trifolium pratense
TWI34G0723 Tripterygium wilfordii
TWI63G1426 Tripterygium wilfordii
unitig_37.g12156 Utricularia gibba
vmacro05805 Vaccinium macrocarpon
VMungo1383G1316 Vigna mungo
Zm00001eb176170 Zea mays
Zm00001eb398800 Zea mays

User provided reference genes

Program Settings