Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01010 Brassica napus
A02p39670 Brassica napus
A03p05000 Brassica napus
A06p36250 Brassica napus
A10p26310 Brassica napus
Aa31LG11G4630 Aethionema arabicum
Aa31LG3G15750 Aethionema arabicum
Actinidia14638 Actinidia chinensis
Actinidia15710 Actinidia chinensis
Ah.12g063370 Amaranthus hybridus
AL6G22100 Arabidopsis lyrata
AL6G37340 Arabidopsis lyrata
Aqoxy7G01846 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7NC9IZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AAJ54F Arachis hypogaea
AT5G11440 Arabidopsis thaliana
AT5G25540 Arabidopsis thaliana
ATR0037G046 Amborella trichopoda
Atru.chr7.1287 Acer truncatum
Atru.chr7.2325 Acer truncatum
AUR62024838 Chenopodium quinoa
AUR62032381 Chenopodium quinoa
BcaB01g05484 Brassica carinata
BcaB01g06306 Brassica carinata
BcaB04g19786 Brassica carinata
BcaB07g29991 Brassica carinata
BcaB08g37059 Brassica carinata
BcaC03g13367 Brassica carinata
BcaC04g19226 Brassica carinata
BcaC09g50856 Brassica carinata
BcaNung01927 Brassica carinata
BolC1t01914H Brassica oleracea
BolC2t06459H Brassica oleracea
BolC2t12008H Brassica oleracea
BolC3t13087H Brassica oleracea
BolC7t40715H Brassica oleracea
BolC7t44757H Brassica oleracea
BolC9t53601H Brassica oleracea
BolC9t59367H Brassica oleracea
BraA02t05082Z Brassica rapa
BraA02t08932Z Brassica rapa
BraA06t26547Z Brassica rapa
BraA08t33004Z Brassica rapa
BraA10t44688Z Brassica rapa
C01p19860 Brassica napus
C02p05040 Brassica napus
C02p59450 Brassica napus
C03p05740 Brassica napus
C07p03200 Brassica napus
C07p42280 Brassica napus
C09p06800 Brassica napus
C09p65420 Brassica napus
CAN.G21.9 Capsicum annuum
CANSAT56G2568 Cannabis sativa
CARHR187840 Cardamine hirsuta
CARHR201790 Cardamine hirsuta
Carub.0006s0989 Capsella rubella
Carub.0006s2340 Capsella rubella
Cc08_g08300 Coffea canephora
Cfa013210 Carpinus fangiana
Ciclev10009480m.g Citrus clementina
CiPaw.03G235800 Carya illinoinensis
CiPaw.08G015700 Carya illinoinensis
ClCG05G017210 Citrullus lanatus
COL.COLO4_24066 Corchorus olitorius
Cpa.g.sc91.6 Carica papaya
CsaV3_3G046690 Cucumis sativus L.
CSS0014753 Camellia sinensis var. sinensis
CSS0033457 Camellia sinensis var. sinensis
DCAR_003061 Daucus carota
DCAR_007682 Daucus carota
Dinv35883 Davidia involucrata
Duzib150G0431 Durio zibethinus
Duzib187G1985 Durio zibethinus
ECA240G1837 Erigeron canadensis
EL10Ac2g02537 Beta vulgaris
Eucgr.C01818 Eucalyptus grandis
FAN15G1681 Fragaria x ananassa
FAN20G2367 Fragaria x ananassa
FAN24G0425 Fragaria x ananassa
FAN27G0504 Fragaria x ananassa
FvH4_2g30160 Fragaria vesca
Glyma.06G073400 Glycine max
Glyma.14G129200 Glycine max
Glyma.17G203900 Glycine max
Gohir.A05G010600 Gossypium hirsutum
Gohir.A06G047900 Gossypium hirsutum
Gohir.A07G032200 Gossypium hirsutum
Gohir.A08G237500 Gossypium hirsutum
Gohir.A11G185400 Gossypium hirsutum
Gohir.A12G126300 Gossypium hirsutum
Gohir.A12G241700 Gossypium hirsutum
Gohir.D01G158400 Gossypium hirsutum
Gohir.D04G088301 Gossypium hirsutum
Gohir.D05G011350 Gossypium hirsutum
Gohir.D05G335100 Gossypium hirsutum
Gohir.D06G047900 Gossypium hirsutum
Gohir.D09G022200 Gossypium hirsutum
Gohir.D09G023175 Gossypium hirsutum
Gohir.D12G143101 Gossypium hirsutum
Gohir.D12G195700 Gossypium hirsutum
Gorai.004G151900 Gossypium raimondii
Gorai.008G052900 Gossypium raimondii
Gorai.009G011700 Gossypium raimondii
Gorai.010G053700 Gossypium raimondii
GSVIVG01015440001 Vitis vinifera
HanXRQChr03g0077811 Helianthus annuus
HanXRQChr13g0409481 Helianthus annuus
Haze_21623 Corylus avellana
Hma1.2p1_0003F.1_g003650 Hydrangea macrophylla
Hma1.2p1_0175F.1_g077210 Hydrangea macrophylla
Hund25658 Selenicereus undatus
Lalb_Chr08g0243781 Lupinus albus
Lalb_Chr23g0269031 Lupinus albus
Lj5g0012132 Lotus japonicus
Lsat_1_v5_gn_3_108141 Lactuca sativa
Manes.03G064800 Manihot esculenta
Manes.16G068200 Manihot esculenta
MBI01_g10034_MAGBIO Magnolia biondii
MBI04_g26645_MAGBIO Magnolia biondii
MD08G1136600 Malus domestica
Medtr1g011280 Medicago truncatula
MELO3C003669.2 Cucumis melo
Migut.E01501 Erythranthe guttata
MSTRG.14001 Avicennia marina
MSTRG.1647 Avicennia marina
Nitab4.5_0000125g0270 Nicotiana tabacum
Nitab4.5_0006579g0060 Nicotiana tabacum
Nn2g11835 Nelumbo nucifera
Nn8g39276 Nelumbo nucifera
Oeu019418.1 Olea europaea
Oeu031563.3 Olea europaea
Oeu045176.1 Olea europaea
Peaxi162Scf00105g01426 Petunia axillaris
PGR031G0366 Punica granatum
PGSC0003DMG400033628 Solanum tuberosum
Phvul.001G055700 Phaseolus vulgaris
Phvul.009G097900 Phaseolus vulgaris
Potri.006G246600 Populus trichocarpa
Prupe.1G466700 Prunus persica
Prupe.7G234300 Prunus persica
Psat6g031000 Pisum sativum
PSO063G5334 Papaver somniferum
PSO782G2888 Papaver somniferum
QL02p086217 Quercus lobata
QL12p031289 Quercus lobata
RcHm_v2.0_Chr6g0312751 Rosa chinensis
Sabra06G0192900 Salix brachista
Sabra18G0035300 Salix brachista
SalBow8G4507 Salvia bowleyana
SalBow8G4816 Salvia bowleyana
Sc23g0007020 Simmondsia chinensis
Sed0023203 Sechium edule
Sed0023915 Sechium edule
Sed0025074 Sechium edule
SGA_v2.0_scaffold163G38098 Striga asiatica
SGA_v2.0_scaffold169G38632 Striga asiatica
Solyc08g067810.3 Solanum lycopersicum
Sopen08g021750 Solanum pennellii
Sp2g22000 Schrenkiella parvula
Sp6g32160 Schrenkiella parvula
TAR383G0233 Trochodendron aralioides
TAR624G0048 Trochodendron aralioides
TAR626G0352 Trochodendron aralioides
THA.LOC104799217 Tarenaya hassleriana
THA.LOC104815044 Tarenaya hassleriana
Thecc.09G144100 Theobroma cacao
Thhalv10004997m.g Eutrema salsugineum
Thhalv10014836m.g Eutrema salsugineum
TPR.G20095 Trifolium pratense
TWI34G1922 Tripterygium wilfordii
TWI63G0992 Tripterygium wilfordii
vmacro05446 Vaccinium macrocarpon
VMungo0647G1622 Vigna mungo

User provided reference genes

Program Settings