Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p03230 Brassica napus
Actinidia01563 Actinidia chinensis
Actinidia04672 Actinidia chinensis
Actinidia12818 Actinidia chinensis
Actinidia28383 Actinidia chinensis
AL4G41410 Arabidopsis lyrata
Aqoxy1G01912 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.78CLWT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QFR843 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZI84TJ Arachis hypogaea
AT2G42800 Arabidopsis thaliana
ATR0213G033 Amborella trichopoda
Atru.BG.48.p Acer truncatum
Atru.chr10.1182 Acer truncatum
BolC4t22024H Brassica oleracea
BraA05t19313Z Brassica rapa
C04p03880 Brassica napus
CAN.G1191.8 Capsicum annuum
CANSAT35G0787 Cannabis sativa
CANSAT64G0821 Cannabis sativa
CARHR137880 Cardamine hirsuta
Carub.0004s2524 Capsella rubella
Ca_00534_v3 Cicer arietinum L.
Cc05_g09180 Coffea canephora
CDE02G3039 Ceratophyllum demersum
Ciclev10018342m.g Citrus clementina
Ciclev10018355m.g Citrus clementina
ClCG02G018270 Citrullus lanatus
ClCG03G006800 Citrullus lanatus
COL.COLO4_31043 Corchorus olitorius
COL.COLO4_33708 Corchorus olitorius
Cpa.g.sc17.8 Carica papaya
CsaV3_1G032380 Cucumis sativus L.
CsaV3_6G015660 Cucumis sativus L.
CSS0017431 Camellia sinensis var. sinensis
CSS0041707 Camellia sinensis var. sinensis
DCAR_003901 Daucus carota
DCAR_009791 Daucus carota
DCAR_021304 Daucus carota
Dinv02649 Davidia involucrata
Dinv12713 Davidia involucrata
Duzib147G0894 Durio zibethinus
Duzib160G0425 Durio zibethinus
Duzib192G0084 Durio zibethinus
Duzib235G0027 Durio zibethinus
ECA234G1247 Erigeron canadensis
ECA246G3925 Erigeron canadensis
Eucgr.A01957 Eucalyptus grandis
FAN02G3754 Fragaria x ananassa
FAN05G2656 Fragaria x ananassa
FAN09G1783 Fragaria x ananassa
FAN14G2402 Fragaria x ananassa
FAN16G3544 Fragaria x ananassa
FAN21G0738 Fragaria x ananassa
FAN25G0927 Fragaria x ananassa
FvH4_3g05310 Fragaria vesca
FvH4_6g37770 Fragaria vesca
Glyma.05G141700 Glycine max
Glyma.08G097400 Glycine max
Glyma.13G219200 Glycine max
Glyma.15G093000 Glycine max
Gohir.A10G042000 Gossypium hirsutum
Gohir.D10G042900 Gossypium hirsutum
Gorai.011G045500 Gossypium raimondii
GSVIVG01021521001 Vitis vinifera
GSVIVG01034257001 Vitis vinifera
HanXRQChr06g0170811 Helianthus annuus
HanXRQChr17g0541271 Helianthus annuus
HanXRQChr17g0564641 Helianthus annuus
Hma1.2p1_0036F.1_g023770 Hydrangea macrophylla
Hma1.2p1_0178F.1_g078140 Hydrangea macrophylla
HPP92_014007 Vanilla planifolia
HPP92_024445 Vanilla planifolia
HPP92_026836 Vanilla planifolia
Lalb_Chr20g0117811 Lupinus albus
Lj1P1172T22 Lonicera japonica
Lj1P586T4 Lonicera japonica
Lj4g0016292 Lotus japonicus
Lj6g0000571 Lotus japonicus
Lsat_1_v5_gn_3_36141 Lactuca sativa
Lsat_1_v5_gn_4_29521 Lactuca sativa
Manes.01G128900 Manihot esculenta
Manes.02G086800 Manihot esculenta
Manes.17G071800 Manihot esculenta
MBI02_g24301_MAGBIO Magnolia biondii
MBI06_g08520_MAGBIO Magnolia biondii
MBI07_g00478_MAGBIO Magnolia biondii
MD05G1281800 Malus domestica
MD09G1156200 Malus domestica
MD17G1142500 Malus domestica
Medtr2g019170 Medicago truncatula
MELO3C002740.2 Cucumis melo
MELO3C019705.2 Cucumis melo
Migut.M00218 Erythranthe guttata
Migut.M00898 Erythranthe guttata
MSTRG.6767 Avicennia marina
Nitab4.5_0001121g0120 Nicotiana tabacum
Nitab4.5_0001402g0080 Nicotiana tabacum
Nitab4.5_0002027g0120 Nicotiana tabacum
Nitab4.5_0002737g0040 Nicotiana tabacum
Nn3g20392 Nelumbo nucifera
Nn3g21007 Nelumbo nucifera
Nn4g26596 Nelumbo nucifera
Nn6g34427 Nelumbo nucifera
Oeu020935.1 Olea europaea
Oeu026479.1 Olea europaea
Oeu030934.1 Olea europaea
Os01g0729400 Oryza sativa ssp. japonica
Os03g0644700 Oryza sativa ssp. japonica
Os05g0530701 Oryza sativa ssp. japonica
Peaxi162Scf00035g00315 Petunia axillaris
PGR042G0629 Punica granatum
PGSC0003DMG400021279 Solanum tuberosum
Phvul.006G165901 Phaseolus vulgaris
Potri.008G211800 Populus trichocarpa
Prupe.3G169100 Prunus persica
Prupe.4G082700 Prunus persica
Psat1g191200 Pisum sativum
PSO541G4358 Papaver somniferum
PSO541G5987 Papaver somniferum
PSO675G4038 Papaver somniferum
PSO675G7621 Papaver somniferum
QL05p057303 Quercus lobata
QL05p057553 Quercus lobata
QL08p043585 Quercus lobata
RcHm_v2.0_Chr2g0150831 Rosa chinensis
RcHm_v2.0_Chr5g0014421 Rosa chinensis
Rhsim06G0122000 Rhododendron simsii
Rhsim13G0115000 Rhododendron simsii
Sabra08G0150800 Salix brachista
SalBow8G0538 Salvia bowleyana
Sc12g0003740 Simmondsia chinensis
Sc17g0004870 Simmondsia chinensis
Sed0006142 Sechium edule
Sed0007322 Sechium edule
Sed0013177 Sechium edule
SEGI_14529 Sequoiadendron giganteum
SEGI_17016 Sequoiadendron giganteum
SEGI_17997 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00189 Striga asiatica
SGA_v2.0_scaffold9G04896 Striga asiatica
SHI10563 Sapria himalayana
SHI12022 Sapria himalayana
SMO239G0192 Selaginella moellendorffii
SMO334G0066 Selaginella moellendorffii
Solyc10g007830.1 Solanum lycopersicum
Sopen10g003730 Solanum pennellii
Sp4g24920 Schrenkiella parvula
TAR362G0775 Trochodendron aralioides
TAR626G1796 Trochodendron aralioides
TAR627G0011 Trochodendron aralioides
TAR627G0269 Trochodendron aralioides
THA.LOC104802268 Tarenaya hassleriana
THA.LOC104824265 Tarenaya hassleriana
Thecc.01G158900 Theobroma cacao
Thecc.06G148400 Theobroma cacao
Thhalv10016617m.g Eutrema salsugineum
TPR.G26239 Trifolium pratense
TWI59G0196 Tripterygium wilfordii
VMungo0540G0279 Vigna mungo
Zm00001eb013390 Zea mays
Zm00001eb050480 Zea mays
Zm00001eb066710 Zea mays
Zm00001eb101740 Zea mays
Zm00001eb131300 Zea mays
Zm00001eb175130 Zea mays
Zm00001eb189460 Zea mays
Zm00001eb204520 Zea mays
Zm00001eb290810 Zea mays
Zm00001eb290850 Zea mays
Zm00001eb361880 Zea mays
Zm00001eb362320 Zea mays
Zm00001eb413070 Zea mays
Zm00001eb418120 Zea mays

User provided reference genes

Program Settings