Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p44240 Brassica napus
A07p16510 Brassica napus
A09p09370 Brassica napus
Aa31LG1G15950 Aethionema arabicum
Actinidia11994 Actinidia chinensis
Actinidia16438 Actinidia chinensis
Actinidia21232 Actinidia chinensis
Actinidia36441 Actinidia chinensis
Ah.02g125580 Amaranthus hybridus
AL8G43930 Arabidopsis lyrata
Aqoxy6G02719 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4VG7J5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7C4JLW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7L2H1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NPYP4Z Arachis hypogaea
AT5G67390 Arabidopsis thaliana
ATR0030G044 Amborella trichopoda
Atru.chr3.163 Acer truncatum
Atru.chr3.192 Acer truncatum
AUR62040265 Chenopodium quinoa
BcaB02g09927 Brassica carinata
BcaB04g20056 Brassica carinata
BcaC03g18375 Brassica carinata
BcaC04g23221 Brassica carinata
BcaC06g34822 Brassica carinata
BolC2t12515H Brassica oleracea
BolC7t42948H Brassica oleracea
BolC9t53989H Brassica oleracea
BraA02t09348Z Brassica rapa
BraA07t29375Z Brassica rapa
BraA09t36588Z Brassica rapa
C02p64510 Brassica napus
C07p24210 Brassica napus
C09p10940 Brassica napus
CAN.G1075.18 Capsicum annuum
CANSAT01G2482 Cannabis sativa
CARHR280210 Cardamine hirsuta
Carub.0008s2709 Capsella rubella
Cc07_g06860 Coffea canephora
Ciclev10026503m.g Citrus clementina
CiPaw.01G006700 Carya illinoinensis
CiPaw.02G004200 Carya illinoinensis
ClCG01G017390 Citrullus lanatus
ClCG02G012390 Citrullus lanatus
COL.COLO4_11544 Corchorus olitorius
Cpa.g.sc6.44 Carica papaya
CsaV3_2G016520 Cucumis sativus L.
CsaV3_6G043920 Cucumis sativus L.
CSS0002661 Camellia sinensis var. sinensis
CSS0031607 Camellia sinensis var. sinensis
DCAR_010831 Daucus carota
DCAR_025783 Daucus carota
Dinv26906 Davidia involucrata
Dinv30069 Davidia involucrata
Duzib147G1493 Durio zibethinus
Duzib187G1312 Durio zibethinus
ECA232G3054 Erigeron canadensis
ECA238G1032 Erigeron canadensis
EL10Ac6g15646 Beta vulgaris
Eucgr.I00716 Eucalyptus grandis
FAN19G2997 Fragaria x ananassa
FAN23G1545 Fragaria x ananassa
FAN26G2221 Fragaria x ananassa
FAN28G1831 Fragaria x ananassa
FvH4_1g17290 Fragaria vesca
Glyma.01G192400 Glycine max
Glyma.05G103900 Glycine max
Glyma.11G049700 Glycine max
Glyma.15G185500 Glycine max
Glyma.17G163400 Glycine max
Gohir.A02G153200 Gossypium hirsutum
Gohir.A10G090100 Gossypium hirsutum
Gohir.A11G216800 Gossypium hirsutum
Gohir.D03G027200 Gossypium hirsutum
Gohir.D10G098000 Gossypium hirsutum
Gohir.D11G206500 Gossypium hirsutum
Gorai.003G028900 Gossypium raimondii
Gorai.007G221700 Gossypium raimondii
Gorai.011G107600 Gossypium raimondii
GSVIVG01000145001 Vitis vinifera
HanXRQChr11g0322451 Helianthus annuus
HanXRQChr12g0373191 Helianthus annuus
HanXRQChr14g0441881 Helianthus annuus
Haze_15306 Corylus avellana
Hma1.2p1_0017F.1_g012150 Hydrangea macrophylla
Hma1.2p1_0942F.1_g239820 Hydrangea macrophylla
HPP92_007856 Vanilla planifolia
HPP92_023674 Vanilla planifolia
HPP92_023691 Vanilla planifolia
Hund13934 Selenicereus undatus
Hund16386 Selenicereus undatus
Lalb_Chr05g0213571 Lupinus albus
Lalb_Chr09g0334051 Lupinus albus
Lalb_Chr16g0389141 Lupinus albus
Lj2g0017817 Lotus japonicus
Lj4A160G62 Lonicera japonica
Lj4g0009335 Lotus japonicus
Lj7A88G34 Lonicera japonica
Lsat_1_v5_gn_2_83781 Lactuca sativa
Lsat_1_v5_gn_4_162340 Lactuca sativa
Manes.12G111200 Manihot esculenta
Manes.13G113400 Manihot esculenta
MD02G1182600 Malus domestica
MD15G1293900 Malus domestica
Medtr4g095440 Medicago truncatula
MELO3C007617.2 Cucumis melo
MELO3C020862.2 Cucumis melo
Migut.H00365 Erythranthe guttata
MSTRG.23688 Avicennia marina
MSTRG.2833 Avicennia marina
Nitab4.5_0000651g0050 Nicotiana tabacum
Nitab4.5_0000868g0010 Nicotiana tabacum
Nitab4.5_0006689g0040 Nicotiana tabacum
Nn1g04611 Nelumbo nucifera
Nn5g30527 Nelumbo nucifera
Oeu013283.1 Olea europaea
Oeu031171.1 Olea europaea
Oeu031172.1 Olea europaea
Oeu040591.1 Olea europaea
Oeu040592.1 Olea europaea
Oeu054187.1 Olea europaea
Os03g0442900 Oryza sativa ssp. japonica
Os03g0604566 Oryza sativa ssp. japonica
Os03g0762100 Oryza sativa ssp. japonica
Os12g0580600 Oryza sativa ssp. japonica
Peaxi162Scf00264g00213 Petunia axillaris
PGR004G0357 Punica granatum
PGSC0003DMG400024938 Solanum tuberosum
Phvul.002G012400 Phaseolus vulgaris
Phvul.003G236700 Phaseolus vulgaris
Potri.005G145800 Populus trichocarpa
Potri.007G053300 Populus trichocarpa
Prupe.6G223500 Prunus persica
Psat4g083520 Pisum sativum
PSO541G5875 Papaver somniferum
PSO675G6353 Papaver somniferum
QL06p039858 Quercus lobata
RcHm_v2.0_Chr2g0107481 Rosa chinensis
Rhsim08G0095200 Rhododendron simsii
Rhsim10G0102400 Rhododendron simsii
Sabra05G0116500 Salix brachista
SalBow6G2131 Salvia bowleyana
Sc16g0000080 Simmondsia chinensis
Sed0005334 Sechium edule
Sed0016234 Sechium edule
Sed0022630 Sechium edule
Sed0024584 Sechium edule
SGA_v2.0_scaffold15G07422 Striga asiatica
SGA_v2.0_scaffold72G24091 Striga asiatica
SMO147G0365 Selaginella moellendorffii
Solyc02g092590.3 Solanum lycopersicum
Sopen02g037160 Solanum pennellii
Sp2g29270 Schrenkiella parvula
TAR376G0432 Trochodendron aralioides
TAR628G1371 Trochodendron aralioides
THA.LOC104819252 Tarenaya hassleriana
THA.LOC104821233 Tarenaya hassleriana
THA.LOC104827558 Tarenaya hassleriana
Thecc.01G069300 Theobroma cacao
Thhalv10005011m.g Eutrema salsugineum
TPR.G23878 Trifolium pratense
TWI09G0556 Tripterygium wilfordii
TWI53G0135 Tripterygium wilfordii
TWI73G0275 Tripterygium wilfordii
vmacro05391 Vaccinium macrocarpon
vmacro17992 Vaccinium macrocarpon
VMungo0251G2494 Vigna mungo
VMungo1215G3265 Vigna mungo
Zm00001eb020730 Zea mays
Zm00001eb050120 Zea mays
Zm00001eb058240 Zea mays
Zm00001eb134870 Zea mays
Zm00001eb186630 Zea mays
Zm00001eb214280 Zea mays

User provided reference genes

Program Settings