Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10840 Brassica napus
A09p37120 Brassica napus
Aa31LG6G6290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis
Actinidia16784 Actinidia chinensis
Actinidia35586 Actinidia chinensis
Actinidia37045 Actinidia chinensis
Ah.09g233420 Amaranthus hybridus
Ah.16g107150 Amaranthus hybridus
Ah.16g108300 Amaranthus hybridus
Ah.16g108320 Amaranthus hybridus
Ah.16g108330 Amaranthus hybridus
Ah.16g108860 Amaranthus hybridus
Ah.16g108870 Amaranthus hybridus
Ah.16g108890 Amaranthus hybridus
AL1G42980 Arabidopsis lyrata
Aqoxy1G02017 Aquilegia oxysepala
Aqoxy2G00428 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea
AT1G29220 Arabidopsis thaliana
ATR0824G134 Amborella trichopoda
Atru.chr10.1642 Acer truncatum
AUR62027698 Chenopodium quinoa
AUR62031227 Chenopodium quinoa
AUR62034872 Chenopodium quinoa
BcaB03g13895 Brassica carinata
BcaB07g32509 Brassica carinata
BcaC05g26946 Brassica carinata
BolC5t31519H Brassica oleracea
BraA07t28874Z Brassica rapa
BraA09t39228Z Brassica rapa
C05p27930 Brassica napus
CAN.G411.88 Capsicum annuum
CAN.G566.51 Capsicum annuum
CANSAT80G0365 Cannabis sativa
CARHR028550 Cardamine hirsuta
Carub.0001s2743 Capsella rubella
Ca_10308_v3 Cicer arietinum L.
CBR_g31948 Chara braunii
Cc02_g15190 Coffea canephora
CDE10G0195 Ceratophyllum demersum
CDE10G0435 Ceratophyllum demersum
CDE10G1123 Ceratophyllum demersum
Cfa000628 Carpinus fangiana
Cfa013812 Carpinus fangiana
Ciclev10015509m.g Citrus clementina
CiPaw.09G071100 Carya illinoinensis
ClCG03G007580 Citrullus lanatus
COL.COLO4_06310 Corchorus olitorius
COL.COLO4_15906 Corchorus olitorius
COL.COLO4_31267 Corchorus olitorius
Cpa.g.sc7.86 Carica papaya
Cpa.g.sc7.87 Carica papaya
Cre01.g021750 Chlamydomonas reinhardtii
CsaV3_1G033240 Cucumis sativus L.
CSS0003365 Camellia sinensis var. sinensis
CSS0010331 Camellia sinensis var. sinensis
CSS0023477 Camellia sinensis var. sinensis
CSS0023566 Camellia sinensis var. sinensis
CSS0043633 Camellia sinensis var. sinensis
DCAR_005202 Daucus carota
DCAR_020881 Daucus carota
Dinv16793 Davidia involucrata
Dinv40698 Davidia involucrata
Dinv40699 Davidia involucrata
Duzib160G0274 Durio zibethinus
Duzib235G1256 Durio zibethinus
ECA248G1387 Erigeron canadensis
EL10Ac8g19518 Beta vulgaris
EL10Ac8g20580 Beta vulgaris
Eucgr.E02762 Eucalyptus grandis
FAN11G0126 Fragaria x ananassa
FAN11G3556 Fragaria x ananassa
FAN16G1462 Fragaria x ananassa
FAN16G3751 Fragaria x ananassa
FAN21G1198 Fragaria x ananassa
FAN25G0294 Fragaria x ananassa
FvH4_3g07540 Fragaria vesca
FvH4_3g37800 Fragaria vesca
Glyma.04G063400 Glycine max
Glyma.06G064600 Glycine max
Gohir.A10G036100 Gossypium hirsutum
Gohir.D10G036800 Gossypium hirsutum
Gorai.011G038700 Gossypium raimondii
GSVIVG01021235001 Vitis vinifera
HanXRQChr11g0350521 Helianthus annuus
Haze_06204 Corylus avellana
Haze_22485 Corylus avellana
HPP92_010042 Vanilla planifolia
HPP92_021480 Vanilla planifolia
Hund21166 Selenicereus undatus
Lalb_Chr15g0086161 Lupinus albus
Lalb_Chr15g0086171 Lupinus albus
Lalb_Chr18g0054631 Lupinus albus
Lj1A1189T62 Lonicera japonica
Lj5g0018916 Lotus japonicus
Lj6g0006857 Lotus japonicus
Lj9A197T43 Lonicera japonica
Lsat_1_v5_gn_1_111240 Lactuca sativa
Lsat_1_v5_gn_6_74880 Lactuca sativa
Manes.16G041300 Manihot esculenta
Manes.17G057500 Manihot esculenta
Mapoly0022s0014 Marchantia polymorpha
MBI07_g09555_MAGBIO Magnolia biondii
MCO08G144 Micromonas commoda
MD05G1298600 Malus domestica
MD10G1277900 Malus domestica
Medtr1g087790 Medicago truncatula
Medtr7g108090 Medicago truncatula
MELO3C002663.2 Cucumis melo
Migut.M01023 Erythranthe guttata
Nitab4.5_0000271g0330 Nicotiana tabacum
Nitab4.5_0004602g0020 Nicotiana tabacum
Nitab4.5_0005171g0040 Nicotiana tabacum
Nitab4.5_0007465g0050 Nicotiana tabacum
Nn1g02598 Nelumbo nucifera
Nn3g19533 Nelumbo nucifera
Oeu043115.1 Olea europaea
Os01g0759700 Oryza sativa ssp. japonica
Peaxi162Scf00302g00311 Petunia axillaris
Peaxi162Scf00912g00019 Petunia axillaris
PGR031G0618 Punica granatum
PGSC0003DMG400028477 Solanum tuberosum
Phvul.009G089700 Phaseolus vulgaris
Potri.004G058700 Populus trichocarpa
Potri.011G068100 Populus trichocarpa
Pp3c21_660 Physcomitrium patens
Pp3c22_6900 Physcomitrium patens
Prupe.4G063800 Prunus persica
Psat6g163160 Pisum sativum
PSO063G1415 Papaver somniferum
PSO782G4674 Papaver somniferum
QL05p048142 Quercus lobata
RcHm_v2.0_Chr5g0011231 Rosa chinensis
Rhsim13G0189000 Rhododendron simsii
Sabra04G0038000 Salix brachista
Sabra11G0049100 Salix brachista
SalBow5G0967 Salvia bowleyana
SalBow5G1360 Salvia bowleyana
SalBow5G1441 Salvia bowleyana
SalBow5G1832 Salvia bowleyana
SalBow5G5223 Salvia bowleyana
SalBow5G5317 Salvia bowleyana
SalBow5G5526 Salvia bowleyana
SalBow8G0896 Salvia bowleyana
Sc07g0007700 Simmondsia chinensis
Sed0004310 Sechium edule
SEGI_23147 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07708 Striga asiatica
SGA_v2.0_scaffold1G00064 Striga asiatica
SHI28530 Sapria himalayana
SMO266G0004 Selaginella moellendorffii
Solyc02g072510.3 Solanum lycopersicum
Sopen02g021480 Solanum pennellii
Sp1g25170 Schrenkiella parvula
TAR627G0229 Trochodendron aralioides
THA.LOC104820602 Tarenaya hassleriana
Thecc.06G168200 Theobroma cacao
Thhalv10008084m.g Eutrema salsugineum
TPR.G16979 Trifolium pratense
TPR.G40724 Trifolium pratense
TWI39G0053 Tripterygium wilfordii
TWI63G1163 Tripterygium wilfordii
unitig_899.g15398 Utricularia gibba
vmacro03922 Vaccinium macrocarpon
VMungo1309G1983 Vigna mungo
Zm00001eb152490 Zea mays
Zm00001eb370530 Zea mays

User provided reference genes

Program Settings