Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10290 Brassica napus
A10p11660 Brassica napus
Aa31LG3G10350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis
Actinidia05171 Actinidia chinensis
Actinidia39414 Actinidia chinensis
Ah.06g183680 Amaranthus hybridus
AL8G29790 Arabidopsis lyrata
Aqoxy7G04099 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea
AT5G54440 Arabidopsis thaliana
ATR0064G128 Amborella trichopoda
ATR0693G070 Amborella trichopoda
ATR0693G140 Amborella trichopoda
ATR0693G286 Amborella trichopoda
ATR0693G350 Amborella trichopoda
Atru.chr2.2808 Acer truncatum
Atru.chr2.2810 Acer truncatum
Atru.chr2.2811 Acer truncatum
AUR62015624 Chenopodium quinoa
AUR62029337 Chenopodium quinoa
BcaB05g22133 Brassica carinata
BcaB08g35795 Brassica carinata
BcaC03g14313 Brassica carinata
BcaC04g20340 Brassica carinata
BolC2t07800H Brassica oleracea
BolC9t57346H Brassica oleracea
BraA02t06097Z Brassica rapa
BraA10t43261Z Brassica rapa
C02p17030 Brassica napus
C09p44730 Brassica napus
CAN.G162.91 Capsicum annuum
CANSAT11G2434 Cannabis sativa
CARHR267710 Cardamine hirsuta
Carub.0008s1474 Capsella rubella
Ca_01815_v3 Cicer arietinum L.
Ca_30535_v3 Cicer arietinum L.
CBR_g48013 Chara braunii
CBR_g48014 Chara braunii
CDE05G1182 Ceratophyllum demersum
Cfa020529 Carpinus fangiana
Cfa025671 Carpinus fangiana
Ciclev10007273m.g Citrus clementina
CiPaw.11G174500 Carya illinoinensis
ClCG11G018320 Citrullus lanatus
COL.COLO4_03559 Corchorus olitorius
Cpa.g.sc80.100 Carica papaya
Cre01.g003500 Chlamydomonas reinhardtii
CsaV3_3G044490 Cucumis sativus L.
CSS0001233 Camellia sinensis var. sinensis
CSS0038840 Camellia sinensis var. sinensis
DCAR_013079 Daucus carota
Dinv08326 Davidia involucrata
Dinv08327 Davidia involucrata
Dinv08328 Davidia involucrata
Dinv22372 Davidia involucrata
Duzib213G0443 Durio zibethinus
Duzib268G1628 Durio zibethinus
ECA236G3046 Erigeron canadensis
ECA236G4182 Erigeron canadensis
ECA240G1154 Erigeron canadensis
EL10Ac4g08092 Beta vulgaris
Eucgr.F03341 Eucalyptus grandis
FAN11G1114 Fragaria x ananassa
FAN16G1973 Fragaria x ananassa
FAN21G1497 Fragaria x ananassa
FAN25G1694 Fragaria x ananassa
FvH4_3g20750 Fragaria vesca
Glyma.12G220900 Glycine max
Glyma.13G280700 Glycine max
Gohir.1Z049574 Gossypium hirsutum
Gohir.1Z049674 Gossypium hirsutum
Gohir.A01G067000 Gossypium hirsutum
Gohir.A11G282591 Gossypium hirsutum
Gohir.A11G282734 Gossypium hirsutum
Gohir.D01G054200 Gossypium hirsutum
Gohir.D11G296200 Gossypium hirsutum
Gohir.D11G296250 Gossypium hirsutum
Gorai.002G074000 Gossypium raimondii
Gorai.007G319300 Gossypium raimondii
GSVIVG01005601001 Vitis vinifera
GSVIVG01006099001 Vitis vinifera
GSVIVG01014409001 Vitis vinifera
GSVIVG01015766001 Vitis vinifera
GSVIVG01016530001 Vitis vinifera
GSVIVG01030797001 Vitis vinifera
HanXRQChr10g0289491 Helianthus annuus
HanXRQChr13g0386411 Helianthus annuus
Haze_09504 Corylus avellana
HPP92_020356 Vanilla planifolia
HPP92_020357 Vanilla planifolia
HPP92_020358 Vanilla planifolia
HPP92_020359 Vanilla planifolia
HPP92_027773 Vanilla planifolia
HPP92_027774 Vanilla planifolia
Hund02202 Selenicereus undatus
Lalb_Chr01g0016971 Lupinus albus
Lalb_Chr25g0286611 Lupinus albus
Lj1C850G7 Lonicera japonica
Lj3g0020332 Lotus japonicus
Lsat_1_v5_gn_3_80381 Lactuca sativa
Lsat_1_v5_gn_4_112941 Lactuca sativa
Lsat_1_v5_gn_4_161921 Lactuca sativa
Lsat_1_v5_gn_6_53560 Lactuca sativa
Lsat_1_v5_gn_7_105721 Lactuca sativa
Lsat_1_v5_gn_7_74701 Lactuca sativa
Lsat_1_v5_gn_8_148540 Lactuca sativa
Lsat_1_v5_gn_8_16361 Lactuca sativa
Lsat_1_v5_gn_8_16381 Lactuca sativa
Lsat_1_v5_gn_9_95861 Lactuca sativa
Manes.03G114700 Manihot esculenta
Mapoly0031s0138 Marchantia polymorpha
MD03G1222200 Malus domestica
MD11G1239600 Malus domestica
MD16G1231300 Malus domestica
Medtr2g080050 Medicago truncatula
Medtr4g126280 Medicago truncatula
MELO3C018224.2 Cucumis melo
Migut.H01912 Erythranthe guttata
MSTRG.12924 Avicennia marina
Nitab4.5_0000815g0060 Nicotiana tabacum
Nitab4.5_0001204g0130 Nicotiana tabacum
Nn1g03970 Nelumbo nucifera
Oeu008022.1 Olea europaea
Os12g0554400 Oryza sativa ssp. japonica
Peaxi162Scf01111g00112 Petunia axillaris
PGR031G0420 Punica granatum
Phvul.005G085200 Phaseolus vulgaris
Potri.011G123900 Populus trichocarpa
Pp3c26_12060 Physcomitrium patens
Pp3c3_4080 Physcomitrium patens
Pp3c3_4110 Physcomitrium patens
Prupe.4G187500 Prunus persica
Psat1g176800 Pisum sativum
Psat1g176880 Pisum sativum
Psat3g119680 Pisum sativum
Psat4g074000 Pisum sativum
Psat5g246120 Pisum sativum
Psat7g242400 Pisum sativum
PSO541G4143 Papaver somniferum
PSO675G2841 Papaver somniferum
QL08p019114 Quercus lobata
RcHm_v2.0_Chr5g0034971 Rosa chinensis
Rhsim06G0193700 Rhododendron simsii
Rhsim06G0194500 Rhododendron simsii
Sabra11G0109200 Salix brachista
Sc03g0009690 Simmondsia chinensis
Sed0014205 Sechium edule
Sed0019496 Sechium edule
SEGI_15865 Sequoiadendron giganteum
SEGI_16455 Sequoiadendron giganteum
SEGI_17451 Sequoiadendron giganteum
SEGI_32398 Sequoiadendron giganteum
SEGI_37124 Sequoiadendron giganteum
SEGI_39917 Sequoiadendron giganteum
SGA_v2.0_scaffold77G25216 Striga asiatica
SHI21494 Sapria himalayana
SMO115G0239 Selaginella moellendorffii
Solyc07g063440.3 Solanum lycopersicum
Sopen07g031610 Solanum pennellii
Sopen07g031630 Solanum pennellii
Sp6g16420 Schrenkiella parvula
TAR627G0431 Trochodendron aralioides
TAR627G0860 Trochodendron aralioides
THA.LOC104811852 Tarenaya hassleriana
Thecc.07G074600 Theobroma cacao
Thhalv10012467m.g Eutrema salsugineum
Thhalv10015732m.g Eutrema salsugineum
TWI38G0763 Tripterygium wilfordii
unitig_0.g2259 Utricularia gibba
vmacro11822 Vaccinium macrocarpon
VMungo1080G0798 Vigna mungo
Zm00001eb137170 Zea mays

User provided reference genes

Program Settings