Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01040 Brassica napus
A06p36400 Brassica napus
Aa31LG11G4580 Aethionema arabicum
Aa31LG3G15670 Aethionema arabicum
Actinidia14666 Actinidia chinensis
Actinidia15734 Actinidia chinensis
AL6G22200 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea
AT5G11530 Arabidopsis thaliana
ATR0315G010 Amborella trichopoda
Atru.chr7.2138 Acer truncatum
Atru.chr7.2139 Acer truncatum
Atru.chr7.2140 Acer truncatum
BcaB01g05477 Brassica carinata
BcaC03g13370 Brassica carinata
BcaNung01931 Brassica carinata
BcaNung03924 Brassica carinata
BcaNung04838 Brassica carinata
BcaNung04839 Brassica carinata
BolC2t06463H Brassica oleracea
BolC3t13094H Brassica oleracea
BolC7t44742H Brassica oleracea
BraA02t05084Z Brassica rapa
BraA03t09842Z Brassica rapa
BraA06t26563Z Brassica rapa
C02p05090 Brassica napus
C07p42110 Brassica napus
CAN.G309.87 Capsicum annuum
CANSAT25G3821 Cannabis sativa
CARHR201690 Cardamine hirsuta
Carub.0006s1000 Capsella rubella
Ca_15608_v3 Cicer arietinum L.
Cc08_g09190 Coffea canephora
CDE05G1167 Ceratophyllum demersum
Cfa013353 Carpinus fangiana
Ciclev10007267m.g Citrus clementina
CiPaw.07G205800 Carya illinoinensis
CiPaw.08G024400 Carya illinoinensis
ClCG08G012320 Citrullus lanatus
ClCG11G015210 Citrullus lanatus
COL.COLO4_18677 Corchorus olitorius
Cpa.g.sc7.254 Carica papaya
Cpa.g.sc7.255 Carica papaya
Cpa.g.sc7.256 Carica papaya
CsaV3_2G030990 Cucumis sativus L.
CsaV3_3G048630 Cucumis sativus L.
CSS0003638 Camellia sinensis var. sinensis
CSS0009602 Camellia sinensis var. sinensis
DCAR_003118 Daucus carota
DCAR_007709 Daucus carota
DCAR_029768 Daucus carota
Dinv14242 Davidia involucrata
Dinv17346 Davidia involucrata
Dinv30267 Davidia involucrata
Dinv30474 Davidia involucrata
Dinv38014 Davidia involucrata
Duzib150G1483 Durio zibethinus
Duzib168G2343 Durio zibethinus
Duzib187G0651 Durio zibethinus
ECA233G1986 Erigeron canadensis
Eucgr.C02901 Eucalyptus grandis
Eucgr.E03518 Eucalyptus grandis
FAN02G4319 Fragaria x ananassa
FAN05G2999 Fragaria x ananassa
FAN09G3084 Fragaria x ananassa
FAN13G2039 Fragaria x ananassa
FAN15G2992 Fragaria x ananassa
FAN20G0872 Fragaria x ananassa
FAN20G1338 Fragaria x ananassa
FAN20G2231 Fragaria x ananassa
FAN27G1714 Fragaria x ananassa
FvH4_2g35880 Fragaria vesca
Glyma.04G081800 Glycine max
Glyma.06G083500 Glycine max
Glyma.17G195000 Glycine max
Gohir.A07G023000 Gossypium hirsutum
Gohir.A07G023100 Gossypium hirsutum
Gohir.D07G026600 Gossypium hirsutum
Gohir.D07G026700 Gossypium hirsutum
Gorai.001G027600 Gossypium raimondii
Gorai.001G027700 Gossypium raimondii
GSVIVG01035651001 Vitis vinifera
HanXRQChr09g0276591 Helianthus annuus
Haze_21872 Corylus avellana
HPP92_026866 Vanilla planifolia
Lalb_Chr01g0011141 Lupinus albus
Lalb_Chr08g0243171 Lupinus albus
Lalb_Chr11g0064431 Lupinus albus
Lalb_Chr11g0064441 Lupinus albus
Lalb_Chr14g0372311 Lupinus albus
Lalb_Chr14g0372341 Lupinus albus
Lalb_Chr22g0352251 Lupinus albus
Lalb_Chr22g0352261 Lupinus albus
Lalb_Chr24g0396931 Lupinus albus
Lj1g0012897 Lotus japonicus
Lj8A589G31 Lonicera japonica
Lj8A589T33 Lonicera japonica
Lj8P589T23 Lonicera japonica
Lj8P589T28 Lonicera japonica
Lsat_1_v5_gn_4_94561 Lactuca sativa
Lsat_1_v5_gn_6_64101 Lactuca sativa
Manes.16G071666 Manihot esculenta
MBI01_g30860_MAGBIO Magnolia biondii
MD08G1116300 Malus domestica
MD15G1096000 Malus domestica
Medtr3g110082 Medicago truncatula
Medtr3g110132 Medicago truncatula
MELO3C003457.2 Cucumis melo
MELO3C011152.2 Cucumis melo
Migut.A00223 Erythranthe guttata
Migut.E01516 Erythranthe guttata
MSTRG.14021 Avicennia marina
MSTRG.1655 Avicennia marina
Nitab4.5_0000406g0040 Nicotiana tabacum
Nitab4.5_0000500g0270 Nicotiana tabacum
Nitab4.5_0000664g0210 Nicotiana tabacum
Nitab4.5_0000664g0250 Nicotiana tabacum
Nitab4.5_0001567g0120 Nicotiana tabacum
Nitab4.5_0001567g0150 Nicotiana tabacum
Nitab4.5_0002178g0010 Nicotiana tabacum
Nn2g11674 Nelumbo nucifera
Nn3g18104 Nelumbo nucifera
Oeu012193.1 Olea europaea
Oeu015740.1 Olea europaea
Oeu031555.1 Olea europaea
Peaxi162Scf00276g00210 Petunia axillaris
Peaxi162Scf00657g00058 Petunia axillaris
PGR044G0442 Punica granatum
PGSC0003DMG401018585 Solanum tuberosum
Phvul.009G107600 Phaseolus vulgaris
Potri.006G240500 Populus trichocarpa
Potri.018G039500 Populus trichocarpa
Prupe.1G450900 Prunus persica
Psat5g022840 Pisum sativum
Psat5g022920 Pisum sativum
PSO782G1327 Papaver somniferum
QL12p029472 Quercus lobata
RcHm_v2.0_Chr6g0305941 Rosa chinensis
Rhsim07G0152700 Rhododendron simsii
Rhsim08G0224000 Rhododendron simsii
Rhsim08G0224300 Rhododendron simsii
Sabra06G0188100 Salix brachista
Sabra18G0039500 Salix brachista
SalBow1G4226 Salvia bowleyana
SalBow4G0344 Salvia bowleyana
Sed0002796 Sechium edule
Sed0007846 Sechium edule
SEGI_07029 Sequoiadendron giganteum
SEGI_34476 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38081 Striga asiatica
SGA_v2.0_scaffold169G38653 Striga asiatica
SHI18661 Sapria himalayana
Solyc11g071250.3 Solanum lycopersicum
Sopen11g028940 Solanum pennellii
Sp6g32070 Schrenkiella parvula
TAR383G0364 Trochodendron aralioides
TAR626G0792 Trochodendron aralioides
TAR626G0813 Trochodendron aralioides
TAR626G1566 Trochodendron aralioides
THA.LOC104799199 Tarenaya hassleriana
THA.LOC104814779 Tarenaya hassleriana
Thecc.09G042000 Theobroma cacao
Thhalv10003568m.g Eutrema salsugineum
Thhalv10015703m.g Eutrema salsugineum
TPR.G1392 Trifolium pratense
TWI63G0612 Tripterygium wilfordii
unitig_26.g9789 Utricularia gibba
unitig_578.g16592 Utricularia gibba
unitig_85.g27152 Utricularia gibba
unitig_85.g27153 Utricularia gibba
vmacro05366 Vaccinium macrocarpon
vmacro18883 Vaccinium macrocarpon
VMungo1309G0329 Vigna mungo

User provided reference genes

Program Settings