Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27040 Brassica napus
Aa31LG5G9950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis
Actinidia13300 Actinidia chinensis
Actinidia14324 Actinidia chinensis
Actinidia23592 Actinidia chinensis
Actinidia31247 Actinidia chinensis
Actinidia36698 Actinidia chinensis
Ah.12g060330 Amaranthus hybridus
Ah.12g060340 Amaranthus hybridus
Ah.12g060350 Amaranthus hybridus
AL4G17350 Arabidopsis lyrata
Aqoxy7G01749 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea
AT2G25730 Arabidopsis thaliana
ATR1120G055 Amborella trichopoda
Atru.chr7.2305 Acer truncatum
AUR62024824 Chenopodium quinoa
AUR62032391 Chenopodium quinoa
AUR62038490 Chenopodium quinoa
BolC3t15586H Brassica oleracea
BraA03t11915Z Brassica rapa
C03p32450 Brassica napus
CANSAT25G1365 Cannabis sativa
CANSAT56G4370 Cannabis sativa
CARHR115530 Cardamine hirsuta
Carub.0004s0550 Capsella rubella
Ca_15687_v3 Cicer arietinum L.
CBR_g31401 Chara braunii
Cc00_g28950 Coffea canephora
Cc00_g31360 Coffea canephora
Cc08_g08140 Coffea canephora
Cc08_g08790 Coffea canephora
CDE10G0547 Ceratophyllum demersum
CDE10G0881 Ceratophyllum demersum
Cfa013229 Carpinus fangiana
Ciclev10007225m.g Citrus clementina
CiPaw.07G216600 Carya illinoinensis
ClCG05G017320 Citrullus lanatus
COL.COLO4_18737 Corchorus olitorius
Cpa.g.sc205.16 Carica papaya
Cpa.g.sc205.19 Carica papaya
Cpa.g.sc205.23 Carica papaya
Cpa.g.sc205.24 Carica papaya
Cpa.g.sc205.26 Carica papaya
CsaV3_3G046830 Cucumis sativus L.
CSS0034867 Camellia sinensis var. sinensis
DCAR_006254 Daucus carota
DCAR_006255 Daucus carota
DCAR_006256 Daucus carota
DCAR_006257 Daucus carota
Dinv14207 Davidia involucrata
Dinv30236 Davidia involucrata
ECA246G1280 Erigeron canadensis
EL10Ac2g02527 Beta vulgaris
Eucgr.C01572 Eucalyptus grandis
FAN01G1061 Fragaria x ananassa
FAN20G0521 Fragaria x ananassa
FAN20G1524 Fragaria x ananassa
FAN24G2522 Fragaria x ananassa
FAN24G2881 Fragaria x ananassa
FvH4_2g30290 Fragaria vesca
FvH4_2g30330 Fragaria vesca
FvH4_2g30421 Fragaria vesca
Glyma.04G073626 Glycine max
Glyma.06G074700 Glycine max
Gohir.A05G049350 Gossypium hirsutum
Gohir.A05G049400 Gossypium hirsutum
Gohir.D05G051300 Gossypium hirsutum
Gorai.009G053000 Gossypium raimondii
GSVIVG01035749001 Vitis vinifera
HanXRQChr03g0075941 Helianthus annuus
HanXRQChr17g0539391 Helianthus annuus
Haze_21651 Corylus avellana
Haze_21653 Corylus avellana
Haze_21654 Corylus avellana
Haze_21655 Corylus avellana
Haze_21656 Corylus avellana
Hma1.2p1_0140F.1_g063760 Hydrangea macrophylla
Hma1.2p1_0140F.1_g063770 Hydrangea macrophylla
Hma1.2p1_0140F.1_g063780 Hydrangea macrophylla
Hma1.2p1_0140F.1_g063800 Hydrangea macrophylla
HPP92_006442 Vanilla planifolia
HPP92_006443 Vanilla planifolia
Hund02993 Selenicereus undatus
Hund02996 Selenicereus undatus
Hund02997 Selenicereus undatus
Lalb_Chr11g0064021 Lupinus albus
Lj1g0020850 Lotus japonicus
Lj8C607G10 Lonicera japonica
Lsat_1_v5_gn_3_27801 Lactuca sativa
Lsat_1_v5_gn_4_165520 Lactuca sativa
Manes.03G064200 Manihot esculenta
Mapoly0049s0060 Marchantia polymorpha
MBI03_g19627_MAGBIO Magnolia biondii
MD00G1060000 Malus domestica
MD08G1211900 Malus domestica
MD15G1113500 Malus domestica
Medtr3g107940 Medicago truncatula
Medtr3g108360 Medicago truncatula
Medtr3g108370 Medicago truncatula
MELO3C003655.2 Cucumis melo
Migut.A00257 Erythranthe guttata
MSTRG.25887 Avicennia marina
Nitab4.5_0000250g0090 Nicotiana tabacum
Nitab4.5_0000250g0100 Nicotiana tabacum
Nitab4.5_0000250g0110 Nicotiana tabacum
Nitab4.5_0000250g0120 Nicotiana tabacum
Nitab4.5_0002393g0010 Nicotiana tabacum
Nitab4.5_0002393g0030 Nicotiana tabacum
Nitab4.5_0005144g0040 Nicotiana tabacum
Nn8g39221 Nelumbo nucifera
Oeu022768.1 Olea europaea
Oeu063261.5 Olea europaea
Os01g0593000 Oryza sativa ssp. japonica
Peaxi162Scf00105g00812 Petunia axillaris
Peaxi162Scf00105g00817 Petunia axillaris
Peaxi162Scf00105g00818 Petunia axillaris
PGR031G1071 Punica granatum
PGR042G0250 Punica granatum
Phvul.009G099400 Phaseolus vulgaris
Potri.006G244900 Populus trichocarpa
Potri.018G035601 Populus trichocarpa
Pp3c19_2530 Physcomitrium patens
PRCOL_00001920 Prasinoderma coloniale
Prupe.1G464500 Prunus persica
Prupe.5G099400 Prunus persica
Prupe.5G112400 Prunus persica
Psat5g025600 Pisum sativum
PSO063G5962 Papaver somniferum
PSO782G0289 Papaver somniferum
QL12p030952 Quercus lobata
QL12p030977 Quercus lobata
RcHm_v2.0_Chr6g0312581 Rosa chinensis
Rhsim02G0185100 Rhododendron simsii
Sabra06G0191800 Salix brachista
SalBow4G2655 Salvia bowleyana
Sc09g0008920 Simmondsia chinensis
Sed0026885 Sechium edule
SEGI_01785 Sequoiadendron giganteum
SEGI_05898 Sequoiadendron giganteum
SEGI_29718 Sequoiadendron giganteum
SEGI_31624 Sequoiadendron giganteum
SGA_v2.0_scaffold280G46835 Striga asiatica
SHI11640 Sapria himalayana
SHI11643 Sapria himalayana
SHI11644 Sapria himalayana
SHI11646 Sapria himalayana
SHI11647 Sapria himalayana
SMO172G0089 Selaginella moellendorffii
Solyc08g068010.2 Solanum lycopersicum
Solyc08g068030.1 Solanum lycopersicum
Solyc08g068040.3 Solanum lycopersicum
Sopen08g021930 Solanum pennellii
Sp4g05330 Schrenkiella parvula
TAR624G1332 Trochodendron aralioides
THA.LOC104803772 Tarenaya hassleriana
Thecc.09G037700 Theobroma cacao
Thhalv10000005m.g Eutrema salsugineum
TPR.G12417 Trifolium pratense
TPR.G12424 Trifolium pratense
TPR.G12448 Trifolium pratense
TWI63G0705 Tripterygium wilfordii
unitig_747.g21873 Utricularia gibba
unitig_747.g21874 Utricularia gibba
unitig_747.g21875 Utricularia gibba
vmacro08818 Vaccinium macrocarpon
vmacro11102 Vaccinium macrocarpon
vmacro11103 Vaccinium macrocarpon
vmacro11104 Vaccinium macrocarpon
vmacro11105 Vaccinium macrocarpon
VMungo1309G1295 Vigna mungo
Zm00001eb161040 Zea mays

User provided reference genes

Program Settings