Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p13320 Brassica napus
A07p13340 Brassica napus
A07p13370 Brassica napus
A07p13510 Brassica napus
A07p13570 Brassica napus
A07p13600 Brassica napus
A08p08630 Brassica napus
A08p27740 Brassica napus
A09p40530 Brassica napus
A09p40560 Brassica napus
Aa31LG7G8050 Aethionema arabicum
Actinidia08203 Actinidia chinensis
Actinidia08204 Actinidia chinensis
Actinidia19850 Actinidia chinensis
AL1G38330 Arabidopsis lyrata
AL1G38370 Arabidopsis lyrata
AL1G38380 Arabidopsis lyrata
AL2G16820 Arabidopsis lyrata
Aqoxy3G03233 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DHW1RD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NNWV08 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQ07EG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM7912 Arachis hypogaea
AT1G27110 Arabidopsis thaliana
AT1G27150 Arabidopsis thaliana
ATR0001G025 Amborella trichopoda
Atru.chr1.3881 Acer truncatum
Atru.chr1.621 Acer truncatum
Atru.chr10.818 Acer truncatum
Atru.chr11.1880 Acer truncatum
Atru.chr2.3843 Acer truncatum
Atru.chr5.3340 Acer truncatum
Atru.chr9.2355 Acer truncatum
AUR62026286 Chenopodium quinoa
AUR62026479 Chenopodium quinoa
BcaB03g11978 Brassica carinata
BcaB03g14111 Brassica carinata
BcaB03g14114 Brassica carinata
BcaB07g32390 Brassica carinata
BcaC05g26340 Brassica carinata
BcaC06g35087 Brassica carinata
BcaC06g35090 Brassica carinata
BcaC06g35091 Brassica carinata
BcaC07g37560 Brassica carinata
BcaC07g39250 Brassica carinata
BolC5t31070H Brassica oleracea
BolC5t31071H Brassica oleracea
BolC5t31073H Brassica oleracea
BolC5t31074H Brassica oleracea
BolC5t31078H Brassica oleracea
BolC5t31079H Brassica oleracea
BolC5t31081H Brassica oleracea
BolC7t42512H Brassica oleracea
BolC7t42514H Brassica oleracea
BolC7t42515H Brassica oleracea
BolC7t42519H Brassica oleracea
BolC8t47901H Brassica oleracea
BolC8t49891H Brassica oleracea
BraA07t29105Z Brassica rapa
BraA07t29109Z Brassica rapa
BraA08t32877Z Brassica rapa
BraA08t34710Z Brassica rapa
BraA09t39549Z Brassica rapa
C05p23600 Brassica napus
C05p23620 Brassica napus
C05p23630 Brassica napus
C05p23640 Brassica napus
C07p19930 Brassica napus
C07p19950 Brassica napus
C07p19960 Brassica napus
C07p20000 Brassica napus
C08p22550 Brassica napus
CAN.G27.36 Capsicum annuum
CANSAT01G0183 Cannabis sativa
CARHR024720 Cardamine hirsuta
CARHR024790 Cardamine hirsuta
Carub.0001s2380 Capsella rubella
Carub.0001s2386 Capsella rubella
Ca_04688_v3 Cicer arietinum L.
Cc11_g13670 Coffea canephora
Cc11_g13680 Coffea canephora
Cc11_g13690 Coffea canephora
CDE06G1386 Ceratophyllum demersum
Cfa009061 Carpinus fangiana
Cfa021096 Carpinus fangiana
Ciclev10031073m.g Citrus clementina
CiPaw.05G142000 Carya illinoinensis
ClCG05G024760 Citrullus lanatus
COL.COLO4_36215 Corchorus olitorius
Cpa.g.sc5.292 Carica papaya
CsaV3_5G032130 Cucumis sativus L.
CSS0048676 Camellia sinensis var. sinensis
DCAR_031068 Daucus carota
Duzib251G0283 Durio zibethinus
Duzib268G0988 Durio zibethinus
ECA248G0235 Erigeron canadensis
EL10Ac6g13125 Beta vulgaris
Eucgr.B03399 Eucalyptus grandis
FAN07G2799 Fragaria x ananassa
FAN12G0945 Fragaria x ananassa
FAN17G1440 Fragaria x ananassa
FAN22G2312 Fragaria x ananassa
FvH4_4g35610 Fragaria vesca
Glyma.01G040300 Glycine max
Glyma.02G024500 Glycine max
Gohir.A01G142100 Gossypium hirsutum
Gohir.D01G133600 Gossypium hirsutum
Gorai.002G165100 Gossypium raimondii
GSVIVG01020097001 Vitis vinifera
HanXRQChr12g0371081 Helianthus annuus
Haze_12040 Corylus avellana
Hma1.2p1_1045F.1_g251340 Hydrangea macrophylla
Hund05926 Selenicereus undatus
Lalb_Chr09g0326751 Lupinus albus
Lj2g0011655 Lotus japonicus
Lj3C1043T17 Lonicera japonica
Lsat_1_v5_gn_8_163421 Lactuca sativa
Manes.01G192600 Manihot esculenta
Mapoly0042s0014 Marchantia polymorpha
MBI01_g01221_MAGBIO Magnolia biondii
MD16G1081000 Malus domestica
Medtr5g037400 Medicago truncatula
Medtr5g037420 Medicago truncatula
MELO3C012048.2 Cucumis melo
Migut.L01360 Erythranthe guttata
Nitab4.5_0000408g0060 Nicotiana tabacum
Nitab4.5_0001726g0090 Nicotiana tabacum
Nn3g17098 Nelumbo nucifera
Oeu028543.1 Olea europaea
Os03g0689900 Oryza sativa ssp. japonica
Peaxi162Scf00209g00842 Petunia axillaris
PGSC0003DMG400022621 Solanum tuberosum
Phvul.002G080300 Phaseolus vulgaris
Potri.010G035400 Populus trichocarpa
Pp3c17_17430 Physcomitrium patens
Prupe.1G265000 Prunus persica
Psat2g115960 Pisum sativum
PSO423G0236 Papaver somniferum
PSO782G5642 Papaver somniferum
QL03p066429 Quercus lobata
RcHm_v2.0_Chr4g0445221 Rosa chinensis
RcHm_v2.0_Chr7g0206221 Rosa chinensis
Sabra10G0029400 Salix brachista
SalBow2G3145 Salvia bowleyana
Sc11g0001560 Simmondsia chinensis
Sed0020834 Sechium edule
SEGI_16255 Sequoiadendron giganteum
SGA_v2.0_scaffold166G38295 Striga asiatica
SMO110G0005 Selaginella moellendorffii
SMO203G0050 Selaginella moellendorffii
SMO252G0024 Selaginella moellendorffii
SMO331G0015 Selaginella moellendorffii
SMO331G0031 Selaginella moellendorffii
SMO331G0048 Selaginella moellendorffii
SMO331G0054 Selaginella moellendorffii
SMO331G0061 Selaginella moellendorffii
Solyc05g006760.4 Solanum lycopersicum
Sopen05g002700 Solanum pennellii
Sp1g21620 Schrenkiella parvula
Sp1g21670 Schrenkiella parvula
TAR622G0281 Trochodendron aralioides
TAR636G0334 Trochodendron aralioides
THA.LOC104822089 Tarenaya hassleriana
THA.LOC104822935 Tarenaya hassleriana
Thecc.02G234800 Theobroma cacao
Thhalv10007555m.g Eutrema salsugineum
Thhalv10007979m.g Eutrema salsugineum
TPR.G21863 Trifolium pratense
TPR.G26722 Trifolium pratense
TWI36G1736 Tripterygium wilfordii
unitig_22.g6920 Utricularia gibba
vmacro01220 Vaccinium macrocarpon
VMungo1215G2281 Vigna mungo
Zm00001eb053520 Zea mays

User provided reference genes

Program Settings