Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40990 Brassica napus
Aa31LG2G5000 Aethionema arabicum
Actinidia15573 Actinidia chinensis
Actinidia15574 Actinidia chinensis
Actinidia36109 Actinidia chinensis
Actinidia36110 Actinidia chinensis
Ah.06g187170 Amaranthus hybridus
AL5G17090 Arabidopsis lyrata
Aqoxy3G01154 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea
AT3G27670 Arabidopsis thaliana
ATR1158G023 Amborella trichopoda
Atru.chr6.2275 Acer truncatum
Atru.chr6.2279 Acer truncatum
Atru.chr6.2280 Acer truncatum
Atru.chr6.2281 Acer truncatum
Atru.chr6.2368 Acer truncatum
Atru.chr6.2369 Acer truncatum
Atru.chr6.2370 Acer truncatum
Atru.chr6.2371 Acer truncatum
AUR62034752 Chenopodium quinoa
AUR62043055 Chenopodium quinoa
BcaB05g24178 Brassica carinata
BcaB07g33347 Brassica carinata
BcaC02g11087 Brassica carinata
BcaC06g30965 Brassica carinata
BcaC06g33789 Brassica carinata
BolC7t44198H Brassica oleracea
BraA06t27018Z Brassica rapa
C07p36860 Brassica napus
CAN.G473.4 Capsicum annuum
CAN.G473.5 Capsicum annuum
CANSAT64G1980 Cannabis sativa
CARHR149120 Cardamine hirsuta
Carub.0005s0611 Capsella rubella
Ca_04154_v3 Cicer arietinum L.
CBR_g19445 Chara braunii
CBR_g19447 Chara braunii
Cc07_g01800 Coffea canephora
Cc07_g01810 Coffea canephora
CDE05G1248 Ceratophyllum demersum
CDE05G1902 Ceratophyllum demersum
CDE05G2835 Ceratophyllum demersum
Cfa007379 Carpinus fangiana
Ciclev10014033m.g Citrus clementina
Ciclev10017517m.g Citrus clementina
CiPaw.03G042500 Carya illinoinensis
ClCG10G013960 Citrullus lanatus
COL.COLO4_29096 Corchorus olitorius
COL.COLO4_29097 Corchorus olitorius
Cpa.g.sc108.58 Carica papaya
Cpa.g.sc108.59 Carica papaya
CsaV3_3G042730 Cucumis sativus L.
CSS0006564 Camellia sinensis var. sinensis
CSS0021155 Camellia sinensis var. sinensis
CSS0026540 Camellia sinensis var. sinensis
CSS0029677 Camellia sinensis var. sinensis
DCAR_001437 Daucus carota
Dinv33448 Davidia involucrata
Duzib187G0443 Durio zibethinus
ECA232G4079 Erigeron canadensis
EL10Ac4g08587 Beta vulgaris
Eucgr.I01751 Eucalyptus grandis
FAN02G4182 Fragaria x ananassa
FAN05G1652 Fragaria x ananassa
FAN05G3555 Fragaria x ananassa
FAN05G5546 Fragaria x ananassa
FAN08G0810 Fragaria x ananassa
FAN09G4321 Fragaria x ananassa
FAN14G1049 Fragaria x ananassa
FAN14G1482 Fragaria x ananassa
FAN14G2166 Fragaria x ananassa
FvH4_5g31861 Fragaria vesca
FvH4_6g51330 Fragaria vesca
FvH4_6g51540 Fragaria vesca
FvH4_6g51541 Fragaria vesca
FvH4_6g51542 Fragaria vesca
FvH4_6g51551 Fragaria vesca
FvH4_6g51560 Fragaria vesca
Glyma.19G004700 Glycine max
Gohir.A09G028500 Gossypium hirsutum
Gohir.D09G028100 Gossypium hirsutum
Gorai.006G032700 Gossypium raimondii
GSVIVG01032418001 Vitis vinifera
HanXRQChr09g0255111 Helianthus annuus
Haze_14730 Corylus avellana
Hma1.2p1_0078F.1_g040220 Hydrangea macrophylla
Hma1.2p1_1291F.1_g273520 Hydrangea macrophylla
Hma1.2p1_1397F.1_g280710 Hydrangea macrophylla
Hma1.2p1_2269F.1_g318480 Hydrangea macrophylla
HPP92_004912 Vanilla planifolia
HPP92_004913 Vanilla planifolia
Hund06717 Selenicereus undatus
Hund06718 Selenicereus undatus
Lalb_Chr24g0397171 Lupinus albus
Lj2g0015656 Lotus japonicus
Lju41A39G70 Lonicera japonica
Lju41A39T81 Lonicera japonica
Lsat_1_v5_gn_4_183480 Lactuca sativa
Manes.17G113000 Manihot esculenta
Mapoly0001s0420 Marchantia polymorpha
MBI10_g32033_MAGBIO Magnolia biondii
MBI10_g38112_MAGBIO Magnolia biondii
MBI10_g39276_MAGBIO Magnolia biondii
MBI10_g46391_MAGBIO Magnolia biondii
MD09G1028200 Malus domestica
MD17G1029800 Malus domestica
Medtr6g005010 Medicago truncatula
MELO3C009985.2 Cucumis melo
Migut.H00083 Erythranthe guttata
Nitab4.5_0002682g0110 Nicotiana tabacum
Nitab4.5_0006802g0030 Nicotiana tabacum
Nn4g22648 Nelumbo nucifera
Oeu006812.1 Olea europaea
Oeu006813.1 Olea europaea
Os01g0169500 Oryza sativa ssp. japonica
Peaxi162Scf00129g01535 Petunia axillaris
PGR142G3424 Punica granatum
PGSC0003DMG400012627 Solanum tuberosum
Phvul.004G008861 Phaseolus vulgaris
Phvul.004G009000 Phaseolus vulgaris
Phvul.004G009109 Phaseolus vulgaris
Phvul.004G009118 Phaseolus vulgaris
Phvul.004G009127 Phaseolus vulgaris
Phvul.004G009161 Phaseolus vulgaris
Phvul.004G009536 Phaseolus vulgaris
Phvul.004G009701 Phaseolus vulgaris
Phvul.004G009761 Phaseolus vulgaris
Phvul.004G009818 Phaseolus vulgaris
Phvul.007G112678 Phaseolus vulgaris
Phvul.007G113156 Phaseolus vulgaris
Potri.001G346000 Populus trichocarpa
Prupe.3G290300 Prunus persica
Prupe.3G290500 Prunus persica
Psat1g055320 Pisum sativum
Psat2g096200 Pisum sativum
PSO017G0470 Papaver somniferum
PSO478G2834 Papaver somniferum
QL02p075066 Quercus lobata
RcHm_v2.0_Chr2g0173001 Rosa chinensis
RcHm_v2.0_Chr3g0488481 Rosa chinensis
RcHm_v2.0_Chr4g0387881 Rosa chinensis
RcHm_v2.0_Chr5g0081041 Rosa chinensis
RcHm_v2.0_Chr6g0244351 Rosa chinensis
Rhsim10G0018100 Rhododendron simsii
Sabra16G0225000 Salix brachista
Sabra16G0225700 Salix brachista
SalBow6G2090 Salvia bowleyana
Sc03g0007550 Simmondsia chinensis
Sed0022234 Sechium edule
SEGI_19034 Sequoiadendron giganteum
SEGI_20333 Sequoiadendron giganteum
SEGI_32252 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34899 Striga asiatica
SMO361G0448 Selaginella moellendorffii
Solyc02g086500.3 Solanum lycopersicum
Sopen00g011090 Solanum pennellii
Sopen00g012710 Solanum pennellii
Sopen02g031220 Solanum pennellii
Sp2g16800 Schrenkiella parvula
TAR371G0622 Trochodendron aralioides
THA.LOC104825324 Tarenaya hassleriana
Thecc.04G015900 Theobroma cacao
Thhalv10003508m.g Eutrema salsugineum
TPR.G14085 Trifolium pratense
TPR.G14087 Trifolium pratense
TWI36G0979 Tripterygium wilfordii
unitig_0.g541 Utricularia gibba
vmacro05455 Vaccinium macrocarpon
vmacro05456 Vaccinium macrocarpon
vmacro05856 Vaccinium macrocarpon
VMungo0464G1595 Vigna mungo
Zm00001eb123050 Zea mays

User provided reference genes

Program Settings