Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia01655 Actinidia chinensis
Actinidia19203 Actinidia chinensis
Actinidia22522 Actinidia chinensis
Actinidia22847 Actinidia chinensis
Actinidia38530 Actinidia chinensis
Ah.02g125000 Amaranthus hybridus
Ah.11g050090 Amaranthus hybridus
Aqoxy4G00091 Aquilegia oxysepala
Aqoxy5G01625 Aquilegia oxysepala
Aqoxy6G01169 Aquilegia oxysepala
Aqoxy6G01170 Aquilegia oxysepala
Atru.chr12.1510 Acer truncatum
Atru.chr13.424 Acer truncatum
AUR62015036 Chenopodium quinoa
AUR62022233 Chenopodium quinoa
AUR62031945 Chenopodium quinoa
AUR62033201 Chenopodium quinoa
CAN.G358.44 Capsicum annuum
CANSAT01G1672 Cannabis sativa
CANSAT25G0030 Cannabis sativa
CANSAT80G0904 Cannabis sativa
Cc04_g13550 Coffea canephora
Cc10_g02540 Coffea canephora
CDE06G0543 Ceratophyllum demersum
CDE06G0974 Ceratophyllum demersum
CDE06G2437 Ceratophyllum demersum
CDE08G1315 Ceratophyllum demersum
Cfa006894 Carpinus fangiana
Cfa006895 Carpinus fangiana
Ciclev10002820m.g Citrus clementina
Ciclev10027136m.g Citrus clementina
CiPaw.07G049200 Carya illinoinensis
CiPaw.07G158400 Carya illinoinensis
CiPaw.08G059800 Carya illinoinensis
CiPaw.08G139600 Carya illinoinensis
CiPaw.08G139700 Carya illinoinensis
ClCG01G019820 Citrullus lanatus
Cpa.g.sc6.165 Carica papaya
CsaV3_6G046550 Cucumis sativus L.
CSS0023371 Camellia sinensis var. sinensis
CSS0049012 Camellia sinensis var. sinensis
DCAR_006593 Daucus carota
DCAR_022465 Daucus carota
DCAR_025966 Daucus carota
Dinv12617 Davidia involucrata
Dinv40018 Davidia involucrata
Dinv42931 Davidia involucrata
Dinv42932 Davidia involucrata
Dinv43168 Davidia involucrata
Dinv43169 Davidia involucrata
Duzib147G0117 Durio zibethinus
Duzib187G1158 Durio zibethinus
ECA232G2400 Erigeron canadensis
ECA238G0774 Erigeron canadensis
ECA238G4041 Erigeron canadensis
EL10As8g23910 Beta vulgaris
Eucgr.F01872 Eucalyptus grandis
Eucgr.H01343 Eucalyptus grandis
Eucgr.I02406 Eucalyptus grandis
FAN15G2223 Fragaria x ananassa
FAN23G2735 Fragaria x ananassa
FAN24G1167 Fragaria x ananassa
FAN24G1883 Fragaria x ananassa
FAN27G0008 Fragaria x ananassa
FAN28G2460 Fragaria x ananassa
FvH4_1g12761 Fragaria vesca
FvH4_2g14710 Fragaria vesca
FvH4_2g14740 Fragaria vesca
Glyma.11G071500 Glycine max
Glyma.17G252800 Glycine max
Gohir.A05G191800 Gossypium hirsutum
Gohir.A12G062900 Gossypium hirsutum
Gohir.D05G195100 Gossypium hirsutum
Gohir.D12G062800 Gossypium hirsutum
Gorai.008G065800 Gossypium raimondii
Gorai.009G199900 Gossypium raimondii
GSVIVG01036224001 Vitis vinifera
HanXRQChr09g0250511 Helianthus annuus
HanXRQChr09g0250531 Helianthus annuus
HanXRQChr14g0440601 Helianthus annuus
HanXRQChr14g0440621 Helianthus annuus
Haze_03857 Corylus avellana
Haze_03875 Corylus avellana
Haze_22541 Corylus avellana
Hma1.2p1_0775F.1_g216490 Hydrangea macrophylla
Hund05396 Selenicereus undatus
Hund13999 Selenicereus undatus
Lj2g0016762 Lotus japonicus
Lj4P206T16 Lonicera japonica
Lsat_1_v5_gn_2_77660 Lactuca sativa
Lsat_1_v5_gn_2_77720 Lactuca sativa
Manes.01G138700 Manihot esculenta
Manes.02G097000 Manihot esculenta
Manes.13G076069 Manihot esculenta
MBI10_g00769_MAGBIO Magnolia biondii
MBI16_g26156_MAGBIO Magnolia biondii
MBI18_g28922_MAGBIO Magnolia biondii
MBI18_g28925_MAGBIO Magnolia biondii
MD02G1143000 Malus domestica
MD08G1026800 Malus domestica
MD15G1023400 Malus domestica
MD15G1256400 Malus domestica
Medtr5g020960 Medicago truncatula
MELO3C007853.2 Cucumis melo
Migut.L00026 Erythranthe guttata
Migut.N00981 Erythranthe guttata
Nitab4.5_0003001g0020 Nicotiana tabacum
Nitab4.5_0005980g0010 Nicotiana tabacum
Nn1g04907 Nelumbo nucifera
Nn1g09207 Nelumbo nucifera
Nn1g09208 Nelumbo nucifera
Nn1g09210 Nelumbo nucifera
Nn5g29686 Nelumbo nucifera
Oeu000178.1 Olea europaea
Oeu025680.1 Olea europaea
Os01g0249700 Oryza sativa ssp. japonica
Os01g0249800 Oryza sativa ssp. japonica
Os04g0661100 Oryza sativa ssp. japonica
Peaxi162Scf00418g00071 Petunia axillaris
PGR031G0975 Punica granatum
PGR031G3823 Punica granatum
PGR119G0532 Punica granatum
PGR119G0576 Punica granatum
PGSC0003DMG400038828 Solanum tuberosum
Phvul.002G033800 Phaseolus vulgaris
Potri.002G032800 Populus trichocarpa
Potri.005G120200 Populus trichocarpa
Potri.005G230300 Populus trichocarpa
Potri.006G079400 Populus trichocarpa
Potri.007G021200 Populus trichocarpa
Potri.018G148900 Populus trichocarpa
Prupe.1G375500 Prunus persica
Prupe.1G549900 Prunus persica
Prupe.7G158500 Prunus persica
Prupe.8G018500 Prunus persica
Psat2g157520 Pisum sativum
PSO541G0719 Papaver somniferum
PSO541G4954 Papaver somniferum
PSO675G0710 Papaver somniferum
PSO675G2774 Papaver somniferum
QL02p009395 Quercus lobata
QL03p011303 Quercus lobata
QL06p035435 Quercus lobata
RcHm_v2.0_Chr2g0100871 Rosa chinensis
RcHm_v2.0_Chr6g0301541 Rosa chinensis
Rhsim05G0125300 Rhododendron simsii
Rhsim06G0029400 Rhododendron simsii
Rhsim07G0216600 Rhododendron simsii
Rhsim07G0216700 Rhododendron simsii
Sabra07G0018100 Salix brachista
SalBow5G1136 Salvia bowleyana
Sed0007242 Sechium edule
Sed0013062 Sechium edule
Sed0026549 Sechium edule
SEGI_04888 Sequoiadendron giganteum
SEGI_19145 Sequoiadendron giganteum
SEGI_21260 Sequoiadendron giganteum
SEGI_24689 Sequoiadendron giganteum
SEGI_25089 Sequoiadendron giganteum
SEGI_25359 Sequoiadendron giganteum
SEGI_26495 Sequoiadendron giganteum
SEGI_28010 Sequoiadendron giganteum
SEGI_40269 Sequoiadendron giganteum
Solyc02g084940.1 Solanum lycopersicum
Sopen02g029610 Solanum pennellii
TAR381G1189 Trochodendron aralioides
TAR633G0312 Trochodendron aralioides
Thecc.01G030100 Theobroma cacao
Thecc.08G031900 Theobroma cacao
TPR.G2394 Trifolium pratense
TWI12G0953 Tripterygium wilfordii
TWI53G0327 Tripterygium wilfordii
vmacro22230 Vaccinium macrocarpon
VMungo1215G3070 Vigna mungo
Zm00001eb432750 Zea mays

User provided reference genes

Program Settings