Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11580 Brassica napus
A03p15550 Brassica napus
A10p10290 Brassica napus
Aa31LG3G9080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis
Actinidia03142 Actinidia chinensis
Actinidia08590 Actinidia chinensis
Actinidia31844 Actinidia chinensis
Ah.03g141030 Amaranthus hybridus
Ah.10g032500 Amaranthus hybridus
Ah.11g045360 Amaranthus hybridus
AL8G27280 Arabidopsis lyrata
Aqoxy7G00202 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea
AT4G28005 Arabidopsis thaliana
AT5G52840 Arabidopsis thaliana
ATR0721G154 Amborella trichopoda
ATR0721G175 Amborella trichopoda
Atru.chr1.335 Acer truncatum
AUR62037745 Chenopodium quinoa
AUR62042233 Chenopodium quinoa
BcaB01g04212 Brassica carinata
BcaB05g21985 Brassica carinata
BcaB08g35638 Brassica carinata
BcaC01g06202 Brassica carinata
BcaC03g14494 Brassica carinata
BcaC03g14495 Brassica carinata
BcaC04g20535 Brassica carinata
BolC2t08066H Brassica oleracea
BolC3t14217H Brassica oleracea
BolC9t57124H Brassica oleracea
BraA02t06220Z Brassica rapa
BraA03t10847Z Brassica rapa
BraA10t43109Z Brassica rapa
C02p19300 Brassica napus
C03p18160 Brassica napus
C09p42440 Brassica napus
CAN.G126.15 Capsicum annuum
CAN.G204.11 Capsicum annuum
CAN.G640.19 Capsicum annuum
CANSAT21G1389 Cannabis sativa
CANSAT21G1446 Cannabis sativa
CARHR265770 Cardamine hirsuta
Carub.0008s1300 Capsella rubella
Ca_20595_v3 Cicer arietinum L.
CBR_g31069 Chara braunii
Cc02_g02230 Coffea canephora
CDE05G0545 Ceratophyllum demersum
CDE05G3305 Ceratophyllum demersum
Ciclev10006072m.g Citrus clementina
CiPaw.06G004300 Carya illinoinensis
ClCG05G008500 Citrullus lanatus
COL.COLO4_06858 Corchorus olitorius
COL.COLO4_30289 Corchorus olitorius
Cre13.g568800 Chlamydomonas reinhardtii
CsaV3_3G017590 Cucumis sativus L.
CSS0000705 Camellia sinensis var. sinensis
DCAR_010652 Daucus carota
DCAR_020275 Daucus carota
Dinv24022 Davidia involucrata
Dinv28379 Davidia involucrata
Dinv35269 Davidia involucrata
Duzib084G0289 Durio zibethinus
Duzib205G1856 Durio zibethinus
ECA232G1033 Erigeron canadensis
ECA233G0998 Erigeron canadensis
ECA238G0868 Erigeron canadensis
ECA240G1980 Erigeron canadensis
ECA240G4047 Erigeron canadensis
ECA240G4361 Erigeron canadensis
EL10Ac2g03211 Beta vulgaris
Eucgr.A02717 Eucalyptus grandis
FAN01G1512 Fragaria x ananassa
FAN03G0349 Fragaria x ananassa
FAN03G2611 Fragaria x ananassa
FAN06G1184 Fragaria x ananassa
FAN06G3020 Fragaria x ananassa
FAN10G2159 Fragaria x ananassa
FAN10G2319 Fragaria x ananassa
FvH4_7g30480 Fragaria vesca
Glyma.09G129000 Glycine max
Gohir.A11G012800 Gossypium hirsutum
Gohir.A12G253200 Gossypium hirsutum
Gohir.D11G013100 Gossypium hirsutum
Gohir.D12G255500 Gossypium hirsutum
Gohir.D12G255550 Gossypium hirsutum
Gorai.007G013400 Gossypium raimondii
Gorai.008G273600 Gossypium raimondii
GSVIVG01028820001 Vitis vinifera
HanXRQChr10g0304961 Helianthus annuus
HanXRQChr15g0494181 Helianthus annuus
Haze_00063 Corylus avellana
Haze_26197 Corylus avellana
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla
HPP92_001384 Vanilla planifolia
Hund13071 Selenicereus undatus
Lalb_Chr03g0034981 Lupinus albus
Lalb_Chr19g0130491 Lupinus albus
Lj1A1007T57 Lonicera japonica
Lj1A1007T58 Lonicera japonica
Lj2g0001989 Lotus japonicus
Lsat_1_v5_gn_2_131500 Lactuca sativa
Lsat_1_v5_gn_9_56860 Lactuca sativa
Manes.06G153700 Manihot esculenta
Manes.14G021000 Manihot esculenta
Mapoly0111s0029 Marchantia polymorpha
MCO01G593 Micromonas commoda
MCO01G594 Micromonas commoda
MD00G1172600 Malus domestica
MD01G1210300 Malus domestica
MD07G1280400 Malus domestica
MD13G1261600 Malus domestica
Medtr6g053280 Medicago truncatula
MELO3C006949.2 Cucumis melo
Migut.F01081 Erythranthe guttata
MSTRG.8697 Avicennia marina
Nitab4.5_0000472g0260 Nicotiana tabacum
Nitab4.5_0011314g0010 Nicotiana tabacum
Nn6g32413 Nelumbo nucifera
Oeu003331.1 Olea europaea
Oeu061668.1 Olea europaea
Os03g0313000 Oryza sativa ssp. japonica
Peaxi162Scf00444g00034 Petunia axillaris
PGR042G1718 Punica granatum
PGSC0003DMG400028905 Solanum tuberosum
Phvul.004G105700 Phaseolus vulgaris
Potri.004G071900 Populus trichocarpa
Potri.017G149100 Populus trichocarpa
Pp3c5_12290 Physcomitrium patens
PRCOL_00006691 Prasinoderma coloniale
Prupe.2G302600 Prunus persica
Psat0s1604g0040 Pisum sativum
Psat5g299680 Pisum sativum
PSO017G3679 Papaver somniferum
PSO478G1314 Papaver somniferum
PSO478G4828 Papaver somniferum
QL09p012375 Quercus lobata
RcHm_v2.0_Chr1g0362161 Rosa chinensis
RcHm_v2.0_Chr1g0378851 Rosa chinensis
Rhsim03G0124900 Rhododendron simsii
Rhsim03G0192400 Rhododendron simsii
Rhsim09G0201100 Rhododendron simsii
Sabra04G0047300 Salix brachista
Sabra17G0124400 Salix brachista
SalBow2G3526 Salvia bowleyana
Sc14g0006860 Simmondsia chinensis
Sed0009881 Sechium edule
Sed0014667 Sechium edule
SEGI_14933 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05280 Striga asiatica
SMO119G0129 Selaginella moellendorffii
Solyc03g007660.4 Solanum lycopersicum
Solyc06g036350.3 Solanum lycopersicum
Sopen03g003590 Solanum pennellii
Sopen06g012130 Solanum pennellii
Sp6g15000 Schrenkiella parvula
Sp7g25950 Schrenkiella parvula
TAR629G0127 Trochodendron aralioides
TAR636G0624 Trochodendron aralioides
THA.LOC104800278 Tarenaya hassleriana
THA.LOC104825117 Tarenaya hassleriana
Thecc.03G186200 Theobroma cacao
Thhalv10014849m.g Eutrema salsugineum
Thhalv10015894m.g Eutrema salsugineum
Thhalv10026409m.g Eutrema salsugineum
TPR.G27150 Trifolium pratense
TWI14G1326 Tripterygium wilfordii
TWI23G0858 Tripterygium wilfordii
unitig_0.g1158 Utricularia gibba
vmacro06614 Vaccinium macrocarpon
vmacro09809 Vaccinium macrocarpon
VMungo0464G2050 Vigna mungo
Zm00001eb015010 Zea mays
Zm00001eb395850 Zea mays

User provided reference genes

Program Settings