Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26850 Brassica napus
Aa31LG4G12760 Aethionema arabicum
Aa31LG5G9160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2316 Anthoceros agrestis
Actinidia21966 Actinidia chinensis
Ah.09g225140 Amaranthus hybridus
AL4G19600 Arabidopsis lyrata
AL5G20770 Arabidopsis lyrata
Aqoxy7G02056 Aquilegia oxysepala
Aqoxy7G02287 Aquilegia oxysepala
Aqoxy7G02288 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R22NLQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S50ZLM Arachis hypogaea
AT2G26610 Arabidopsis thaliana
AT3G33530 Arabidopsis thaliana
ATR1120G180 Amborella trichopoda
Atru.chr7.1118 Acer truncatum
AUR62011160 Chenopodium quinoa
AUR62013328 Chenopodium quinoa
BcaB01g03030 Brassica carinata
BcaB07g33169 Brassica carinata
BcaB07g33170 Brassica carinata
BcaC01g04911 Brassica carinata
BcaC08g43677 Brassica carinata
BolC3t15561H Brassica oleracea
BolC6t36178H Brassica oleracea
BolC6t36594H Brassica oleracea
BolC8t50699H Brassica oleracea
BraA03t11897Z Brassica rapa
BraSC56t46385Z Brassica rapa
C03p32190 Brassica napus
C04p60270 Brassica napus
C06p10960 Brassica napus
C06p14160 Brassica napus
C09p47760 Brassica napus
CAN.G138.14 Capsicum annuum
CANSAT11G1469 Cannabis sativa
CARHR153610 Cardamine hirsuta
Carub.0004s0687 Capsella rubella
Carub.0016s0010 Capsella rubella
Ca_06930_v3 Cicer arietinum L.
Ca_06931_v3 Cicer arietinum L.
Ca_30460_v3 Cicer arietinum L.
CBR_g41081 Chara braunii
Cc06_g08210 Coffea canephora
CDE03G0124 Ceratophyllum demersum
CDE04G2506 Ceratophyllum demersum
Cfa003405 Carpinus fangiana
Ciclev10007259m.g Citrus clementina
CiPaw.03G246900 Carya illinoinensis
ClCG06G011370 Citrullus lanatus
COL.COLO4_35123 Corchorus olitorius
Cpa.g.sc46.23 Carica papaya
Cre10.g449950 Chlamydomonas reinhardtii
CsaV3_1G030400 Cucumis sativus L.
CsaV3_UNG023150 Cucumis sativus L.
CsaV3_UNG026150 Cucumis sativus L.
DCAR_010315 Daucus carota
DCAR_014896 Daucus carota
Dinv36495 Davidia involucrata
Dinv41488 Davidia involucrata
Dinv41489 Davidia involucrata
Duzib168G0398 Durio zibethinus
Duzib187G1937 Durio zibethinus
ECA236G2336 Erigeron canadensis
ECA240G1422 Erigeron canadensis
ECA240G2868 Erigeron canadensis
ECA240G3712 Erigeron canadensis
EL10Ac8g18695 Beta vulgaris
Eucgr.C04259 Eucalyptus grandis
FAN19G2815 Fragaria x ananassa
FAN23G1361 Fragaria x ananassa
FAN23G2019 Fragaria x ananassa
FAN26G1964 Fragaria x ananassa
FAN28G1420 Fragaria x ananassa
FvH4_1g02820 Fragaria vesca
Glyma.13G158400 Glycine max
Gohir.A07G036800 Gossypium hirsutum
Gohir.A08G238400 Gossypium hirsutum
Gohir.D07G040800 Gossypium hirsutum
Gohir.D08G259100 Gossypium hirsutum
Gorai.001G043400 Gossypium raimondii
Gorai.004G276600 Gossypium raimondii
GSVIVG01015557001 Vitis vinifera
HanXRQChr03g0064791 Helianthus annuus
HanXRQChr05g0143441 Helianthus annuus
HanXRQChr09g0241521 Helianthus annuus
Haze_13487 Corylus avellana
Haze_18451 Corylus avellana
Haze_25536 Corylus avellana
Haze_25541 Corylus avellana
Haze_25542 Corylus avellana
HPP92_024596 Vanilla planifolia
Hund09269 Selenicereus undatus
Hund09270 Selenicereus undatus
Hund26527 Selenicereus undatus
Lalb_Chr12g0198051 Lupinus albus
Lalb_Chr13g0301701 Lupinus albus
Lj4g0004437 Lotus japonicus
Lj7A426T59 Lonicera japonica
Lj7C426G10 Lonicera japonica
Lsat_1_v5_gn_0_43201 Lactuca sativa
Lsat_1_v5_gn_7_43900 Lactuca sativa
Lsat_1_v5_gn_8_62220 Lactuca sativa
Lsat_1_v5_gn_8_63461 Lactuca sativa
Manes.14G114600 Manihot esculenta
Mapoly0041s0113 Marchantia polymorpha
MBI04_g29332_MAGBIO Magnolia biondii
MD02G1028100 Malus domestica
MD15G1169800 Malus domestica
Medtr4g114930 Medicago truncatula
Medtr8g073750 Medicago truncatula
MELO3C010320.2 Cucumis melo
Migut.K00436 Erythranthe guttata
Migut.K00437 Erythranthe guttata
MSTRG.26413 Avicennia marina
Nitab4.5_0000028g0120 Nicotiana tabacum
Nitab4.5_0001776g0030 Nicotiana tabacum
Nn2g12080 Nelumbo nucifera
Nn8g39500 Nelumbo nucifera
Oeu012614.1 Olea europaea
Oeu040327.1 Olea europaea
Oeu040328.1 Olea europaea
Os02g0136933 Oryza sativa ssp. japonica
Os02g0137000 Oryza sativa ssp. japonica
Peaxi162Scf00891g00220 Petunia axillaris
Phvul.003G167101 Phaseolus vulgaris
Potri.018G128400 Populus trichocarpa
Pp3c11_23650 Physcomitrium patens
Pp3c7_2590 Physcomitrium patens
Prupe.7G246700 Prunus persica
Psat4g037880 Pisum sativum
Psat4g037920 Pisum sativum
PSO017G4586 Papaver somniferum
PSO170G6007 Papaver somniferum
PSO541G4337 Papaver somniferum
QL02p089511 Quercus lobata
QL02p089531 Quercus lobata
RcHm_v2.0_Chr1g0384271 Rosa chinensis
RcHm_v2.0_Chr2g0087941 Rosa chinensis
Rhsim01G0066800 Rhododendron simsii
Sabra18G0109200 Salix brachista
Sabra18G0109300 Salix brachista
SalBow1G7082 Salvia bowleyana
Sc18g0000460 Simmondsia chinensis
Sed0021658 Sechium edule
Sed0028143 Sechium edule
SEGI_17541 Sequoiadendron giganteum
SEGI_36835 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31044 Striga asiatica
SHI03368 Sapria himalayana
SHI03369 Sapria himalayana
SHI03370 Sapria himalayana
SHI03372 Sapria himalayana
SMO347G0439 Selaginella moellendorffii
Solyc07g008075.1 Solanum lycopersicum
Solyc07g008090.4 Solanum lycopersicum
Sopen07g003960 Solanum pennellii
Sp1g38940 Schrenkiella parvula
Sp1g41730 Schrenkiella parvula
Sp4g09400 Schrenkiella parvula
TAR636G2372 Trochodendron aralioides
THA.LOC104808973 Tarenaya hassleriana
THA.LOC104811026 Tarenaya hassleriana
Thecc.09G129800 Theobroma cacao
Thhalv10011188m.g Eutrema salsugineum
TPR.G26484 Trifolium pratense
TPR.G35745 Trifolium pratense
TPR.G35747 Trifolium pratense
TWI32G0682 Tripterygium wilfordii
unitig_748.g7159 Utricularia gibba
vmacro20578 Vaccinium macrocarpon
VMungo1215G0854 Vigna mungo
VMungo1215G3423 Vigna mungo
Zm00001eb231770 Zea mays

User provided reference genes

Program Settings