Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18420 Brassica napus
A05p12660 Brassica napus
Aa31LG5G4630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis
Actinidia03594 Actinidia chinensis
Actinidia03595 Actinidia chinensis
Actinidia03596 Actinidia chinensis
Actinidia10801 Actinidia chinensis
Ah.03g136730 Amaranthus hybridus
Ah.08g214440 Amaranthus hybridus
Ah.08g214450 Amaranthus hybridus
AL4G28490 Arabidopsis lyrata
Aqoxy1G02929 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea
AT2G32970 Arabidopsis thaliana
Atru.chr6.3252 Acer truncatum
AUR62001107 Chenopodium quinoa
AUR62008931 Chenopodium quinoa
AUR62032475 Chenopodium quinoa
AUR62040130 Chenopodium quinoa
BcaB01g03955 Brassica carinata
BcaB02g10511 Brassica carinata
BcaC01g05877 Brassica carinata
BcaC02g11363 Brassica carinata
BcaC09g50171 Brassica carinata
BcaNung06410 Brassica carinata
BolC3t14538H Brassica oleracea
BolC4t23207H Brassica oleracea
BraA03t11105Z Brassica rapa
BraA05t20204Z Brassica rapa
C03p21510 Brassica napus
C04p16550 Brassica napus
C09p40870 Brassica napus
CAN.G1493.1 Capsicum annuum
CANSAT01G0074 Cannabis sativa
CANSAT01G3237 Cannabis sativa
CANSAT64G2545 Cannabis sativa
CARHR126920 Cardamine hirsuta
Carub.0004s1441 Capsella rubella
Ca_16283_v3 Cicer arietinum L.
CBR_g29855 Chara braunii
Cc05_g02970 Coffea canephora
CDE07G0144 Ceratophyllum demersum
Ciclev10014490m.g Citrus clementina
CiPaw.03G155400 Carya illinoinensis
CiPaw.03G155500 Carya illinoinensis
CiPaw.04G110600 Carya illinoinensis
CiPaw.04G110700 Carya illinoinensis
ClCG02G018060 Citrullus lanatus
COL.COLO4_21870 Corchorus olitorius
COL.COLO4_21871 Corchorus olitorius
Cpa.g.sc132.19 Carica papaya
Cre12.g513852 Chlamydomonas reinhardtii
CsaV3_6G015350 Cucumis sativus L.
CSS0033567 Camellia sinensis var. sinensis
DCAR_012922 Daucus carota
DCAR_019433 Daucus carota
DCAR_021140 Daucus carota
DCAR_023146 Daucus carota
Dinv08722 Davidia involucrata
Dinv39747 Davidia involucrata
Duzib133G0500 Durio zibethinus
Duzib138G0037 Durio zibethinus
Duzib211G0403 Durio zibethinus
ECA234G3864 Erigeron canadensis
ECA236G3366 Erigeron canadensis
ECA240G4712 Erigeron canadensis
EL10Ac6g13970 Beta vulgaris
EL10Ac7g17863 Beta vulgaris
Eucgr.K00757 Eucalyptus grandis
FAN02G1294 Fragaria x ananassa
FAN05G2256 Fragaria x ananassa
FAN09G4790 Fragaria x ananassa
FAN14G1081 Fragaria x ananassa
FvH4_6g42290 Fragaria vesca
Glyma.13G026700 Glycine max
Glyma.20G056800 Glycine max
Gohir.A07G082500 Gossypium hirsutum
Gohir.A07G168800 Gossypium hirsutum
Gohir.D07G089000 Gossypium hirsutum
Gohir.D07G175200 Gossypium hirsutum
Gorai.001G095400 Gossypium raimondii
Gorai.001G196200 Gossypium raimondii
GSVIVG01003286001 Vitis vinifera
GSVIVG01030501001 Vitis vinifera
HanXRQChr10g0306531 Helianthus annuus
HanXRQChr10g0310161 Helianthus annuus
HanXRQChr16g0506421 Helianthus annuus
Haze_12770 Corylus avellana
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla
HPP92_010852 Vanilla planifolia
HPP92_011782 Vanilla planifolia
Hund05567 Selenicereus undatus
Hund15359 Selenicereus undatus
Hund15378 Selenicereus undatus
Hund18404 Selenicereus undatus
Lalb_Chr15g0080851 Lupinus albus
Lalb_Chr18g0049761 Lupinus albus
Lj1C780G17 Lonicera japonica
Lj6g0017826 Lotus japonicus
Lj8A129T88 Lonicera japonica
Lsat_1_v5_gn_5_124380 Lactuca sativa
Lsat_1_v5_gn_7_95060 Lactuca sativa
Lsat_1_v5_gn_9_105800 Lactuca sativa
Manes.12G069800 Manihot esculenta
Manes.13G046600 Manihot esculenta
Manes.13G066300 Manihot esculenta
Mapoly0071s0059 Marchantia polymorpha
MBI16_g26185_MAGBIO Magnolia biondii
MCO15G069 Micromonas commoda
MD09G1113700 Malus domestica
MD17G1103800 Malus domestica
Medtr3g080400 Medicago truncatula
MELO3C019738.2 Cucumis melo
Migut.H01245 Erythranthe guttata
Migut.M00422 Erythranthe guttata
MSTRG.14132 Avicennia marina
Nitab4.5_0000482g0250 Nicotiana tabacum
Nitab4.5_0008863g0010 Nicotiana tabacum
Nn1g03381 Nelumbo nucifera
Nn1g07292 Nelumbo nucifera
Oeu010926.4 Olea europaea
Oeu046908.1 Olea europaea
Os02g0771800 Oryza sativa ssp. japonica
Os05g0597400 Oryza sativa ssp. japonica
Peaxi162Scf00921g00252 Petunia axillaris
PGR142G3363 Punica granatum
PGSC0003DMG400000690 Solanum tuberosum
Phvul.006G012800 Phaseolus vulgaris
Potri.002G224900 Populus trichocarpa
Potri.014G158200 Populus trichocarpa
Pp3c17_9940 Physcomitrium patens
Pp3c9_1750 Physcomitrium patens
PRCOL_00003691 Prasinoderma coloniale
Prupe.3G210900 Prunus persica
Psat5g111680 Pisum sativum
PSO210G1396 Papaver somniferum
PSO541G1393 Papaver somniferum
PSO675G0796 Papaver somniferum
PSO832G2142 Papaver somniferum
QL08p030755 Quercus lobata
RcHm_v2.0_Chr2g0158131 Rosa chinensis
Rhsim04G0050600 Rhododendron simsii
Sabra02G0172000 Salix brachista
Sabra14G0120200 Salix brachista
SalBow7G2067 Salvia bowleyana
Sc05g0002040 Simmondsia chinensis
Sc06g0009640 Simmondsia chinensis
Sed0004670 Sechium edule
Sed0016081 Sechium edule
SEGI_14118 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37554 Striga asiatica
SGA_v2.0_scaffold70G23382 Striga asiatica
SHI10040 Sapria himalayana
SMO361G0133 Selaginella moellendorffii
Solyc07g049350.3 Solanum lycopersicum
Sopen07g024690 Solanum pennellii
Sp4g15330 Schrenkiella parvula
TAR626G1560 Trochodendron aralioides
THA.LOC104801005 Tarenaya hassleriana
THA.LOC104826134 Tarenaya hassleriana
Thecc.01G181600 Theobroma cacao
Thecc.01G223400 Theobroma cacao
Thhalv10016338m.g Eutrema salsugineum
TPR.G29036 Trifolium pratense
TWI36G0149 Tripterygium wilfordii
TWI75G1163 Tripterygium wilfordii
unitig_26.g9924 Utricularia gibba
unitig_26.g9925 Utricularia gibba
vmacro09358 Vaccinium macrocarpon
VMungo0540G1114 Vigna mungo
Zm00001eb256350 Zea mays
Zm00001eb297890 Zea mays

User provided reference genes

Program Settings