Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p20120 Brassica napus
Aa31LG9G13060 Aethionema arabicum
Actinidia15319 Actinidia chinensis
Actinidia15320 Actinidia chinensis
Actinidia22553 Actinidia chinensis
Actinidia29828 Actinidia chinensis
Actinidia38011 Actinidia chinensis
Ah.11g043110 Amaranthus hybridus
AL8G17880 Arabidopsis lyrata
Aqoxy5G01665 Aquilegia oxysepala
Aqoxy6G01079 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5D7Q92 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0KAFE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P6P9CF Arachis hypogaea
AT5G42950 Arabidopsis thaliana
ATR0733G229 Amborella trichopoda
Atru.chr13.495 Acer truncatum
Atru.chr13.496 Acer truncatum
Atru.chr13.497 Acer truncatum
Atru.chr13.498 Acer truncatum
AUR62034944 Chenopodium quinoa
AUR62038829 Chenopodium quinoa
BcaB07g31029 Brassica carinata
BcaC04g21954 Brassica carinata
BolC9t55453H Brassica oleracea
BraA09t37625Z Brassica rapa
C09p25510 Brassica napus
CAN.G1126.53 Capsicum annuum
CANSAT25G0428 Cannabis sativa
CARHR181120 Cardamine hirsuta
Carub.0008s0582 Capsella rubella
Ca_06587_v3 Cicer arietinum L.
Ca_13352_v3 Cicer arietinum L.
CBR_g20442 Chara braunii
Cc10_g03010 Coffea canephora
CDE01G0020 Ceratophyllum demersum
CDE01G0175 Ceratophyllum demersum
CDE01G0188 Ceratophyllum demersum
CDE01G0640 Ceratophyllum demersum
CDE02G3040 Ceratophyllum demersum
Cfa018143 Carpinus fangiana
Ciclev10000013m.g Citrus clementina
CiPaw.15G077300 Carya illinoinensis
CiPaw.16G055800 Carya illinoinensis
ClCG08G015190 Citrullus lanatus
COL.COLO4_26331 Corchorus olitorius
Cpa.g.sc64.81 Carica papaya
Cre04.g225350 Chlamydomonas reinhardtii
CsaV3_2G028620 Cucumis sativus L.
CSS0024556 Camellia sinensis var. sinensis
CSS0034936 Camellia sinensis var. sinensis
DCAR_019527 Daucus carota
DCAR_020969 Daucus carota
Dinv36071 Davidia involucrata
Dinv39410 Davidia involucrata
Duzib041G0176 Durio zibethinus
Duzib093G1886 Durio zibethinus
Duzib116G0511 Durio zibethinus
ECA232G3773 Erigeron canadensis
ECA247G1453 Erigeron canadensis
EL10Ac1g01750 Beta vulgaris
Eucgr.F01902 Eucalyptus grandis
FAN15G3622 Fragaria x ananassa
FAN20G1022 Fragaria x ananassa
FAN27G1736 Fragaria x ananassa
FvH4_2g39920 Fragaria vesca
Glyma.04G032700 Glycine max
Glyma.06G032600 Glycine max
Glyma.14G075800 Glycine max
Glyma.17G249900 Glycine max
Gohir.A01G116100 Gossypium hirsutum
Gohir.A01G116200 Gossypium hirsutum
Gohir.D01G104400 Gossypium hirsutum
Gohir.D01G104600 Gossypium hirsutum
Gorai.002G128500 Gossypium raimondii
Gorai.002G128600 Gossypium raimondii
GSVIVG01009695001 Vitis vinifera
HanXRQChr16g0498501 Helianthus annuus
HanXRQChr16g0507581 Helianthus annuus
Haze_17980 Corylus avellana
HPP92_018700 Vanilla planifolia
HPP92_018782 Vanilla planifolia
HPP92_018811 Vanilla planifolia
HPP92_018812 Vanilla planifolia
HPP92_018813 Vanilla planifolia
HPP92_024929 Vanilla planifolia
HPP92_024930 Vanilla planifolia
HPP92_024938 Vanilla planifolia
HPP92_024939 Vanilla planifolia
HPP92_024940 Vanilla planifolia
HPP92_024941 Vanilla planifolia
Hund26579 Selenicereus undatus
Lalb_Chr11g0062361 Lupinus albus
Lalb_Chr14g0369191 Lupinus albus
Lalb_Chr22g0355521 Lupinus albus
Lalb_Chr24g0399001 Lupinus albus
Lj1g0007825 Lotus japonicus
Lj4C41G7 Lonicera japonica
Lj4C785T10 Lonicera japonica
Lj4C785T11 Lonicera japonica
Lj5g0026255 Lotus japonicus
Lsat_1_v5_gn_2_49781 Lactuca sativa
Lsat_1_v5_gn_3_132401 Lactuca sativa
Lsat_1_v5_gn_4_117960 Lactuca sativa
Manes.15G188300 Manihot esculenta
Mapoly0013s0059 Marchantia polymorpha
Mapoly0129s0048 Marchantia polymorpha
MBI16_g37748_MAGBIO Magnolia biondii
MD08G1034300 Malus domestica
MD15G1031200 Malus domestica
Medtr1g022145 Medicago truncatula
Medtr3g111810 Medicago truncatula
MELO3C010934.2 Cucumis melo
Migut.C00714 Erythranthe guttata
MSTRG.1284 Avicennia marina
Nitab4.5_0000110g0560 Nicotiana tabacum
Nitab4.5_0009105g0010 Nicotiana tabacum
Nn1g05048 Nelumbo nucifera
Nn5g29561 Nelumbo nucifera
Oeu016746.1 Olea europaea
Oeu036189.1 Olea europaea
Oeu049961.1 Olea europaea
Os07g0137900 Oryza sativa ssp. japonica
Peaxi162Scf00690g00025 Petunia axillaris
PGR083G2608 Punica granatum
PGSC0003DMG400005140 Solanum tuberosum
Phvul.001G015100 Phaseolus vulgaris
Phvul.009G057400 Phaseolus vulgaris
Potri.002G262300 Populus trichocarpa
Pp3c4_9300 Physcomitrium patens
PRCOL_00005467 Prasinoderma coloniale
Prupe.1G380700 Prunus persica
Psat0s1774g0080 Pisum sativum
Psat0s3731g0120 Pisum sativum
Psat0s7005g0040 Pisum sativum
Psat0s8173g0040 Pisum sativum
Psat1g036160 Pisum sativum
Psat6g006520 Pisum sativum
PSO541G1688 Papaver somniferum
PSO675G6685 Papaver somniferum
QL02p008027 Quercus lobata
RcHm_v2.0_Chr6g0300861 Rosa chinensis
Rhsim07G0237600 Rhododendron simsii
Sabra02G0199100 Salix brachista
Sabra14G0141800 Salix brachista
SalBow8G0890 Salvia bowleyana
Sc02g0006250 Simmondsia chinensis
Sc15g0006910 Simmondsia chinensis
Sed0014403 Sechium edule
Sed0028038 Sechium edule
SEGI_26744 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10232 Striga asiatica
SGA_v2.0_scaffold48G18076 Striga asiatica
SHI08161 Sapria himalayana
SMO358G0406 Selaginella moellendorffii
Solyc04g080240.4 Solanum lycopersicum
Sopen04g033820 Solanum pennellii
Sp2g07700 Schrenkiella parvula
TAR376G0310 Trochodendron aralioides
TAR628G0682 Trochodendron aralioides
THA.LOC104814159 Tarenaya hassleriana
THA.LOC104814161 Tarenaya hassleriana
Thecc.08G025200 Theobroma cacao
Thhalv10003129m.g Eutrema salsugineum
TPR.G12352 Trifolium pratense
TPR.G29754 Trifolium pratense
TWI36G1026 Tripterygium wilfordii
unitig_578.g16732 Utricularia gibba
unitig_85.g27238 Utricularia gibba
unitig_85.g27239 Utricularia gibba
vmacro04519 Vaccinium macrocarpon
VMungo0647G1645 Vigna mungo
VMungo1309G1132 Vigna mungo
Zm00001eb059270 Zea mays
Zm00001eb299670 Zea mays

User provided reference genes

Program Settings