Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15340 Brassica napus
A01p15350 Brassica napus
A09p28480 Brassica napus
Aa31LG6G7280 Aethionema arabicum
Aa31LG6G7290 Aethionema arabicum
Aa31LG9G11320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1866 Anthoceros agrestis
Ah.12g053130 Amaranthus hybridus
Ah.12g053140 Amaranthus hybridus
AL6G44800 Arabidopsis lyrata
AL7G29210 Arabidopsis lyrata
Aqoxy7G00029 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea
AT4G10750 Arabidopsis thaliana
AT4G24070 Arabidopsis thaliana
AT4G24080 Arabidopsis thaliana
ATR0620G013 Amborella trichopoda
Atru.chr9.1910 Acer truncatum
AUR62007042 Chenopodium quinoa
AUR62007043 Chenopodium quinoa
AUR62019906 Chenopodium quinoa
AUR62019907 Chenopodium quinoa
BcaB01g01511 Brassica carinata
BcaC04g21069 Brassica carinata
BcaC09g50914 Brassica carinata
BcaC09g50915 Brassica carinata
BcaNung01112 Brassica carinata
BolC1t01855H Brassica oleracea
BolC1t01856H Brassica oleracea
BolC9t56444H Brassica oleracea
BraA01t01478Z Brassica rapa
BraA01t01479Z Brassica rapa
BraA09t38413Z Brassica rapa
C01p19290 Brassica napus
C01p19300 Brassica napus
C09p36050 Brassica napus
CAN.G479.14 Capsicum annuum
CAN.G792.28 Capsicum annuum
CANSAT21G0847 Cannabis sativa
CARHR006270 Cardamine hirsuta
CARHR006280 Cardamine hirsuta
CARHR231480 Cardamine hirsuta
CARHR255860 Cardamine hirsuta
Carub.0006s2953 Capsella rubella
Carub.0007s1702 Capsella rubella
Ca_12579_v3 Cicer arietinum L.
Cc08_g16660 Coffea canephora
CDE04G2232 Ceratophyllum demersum
CDE07G1159 Ceratophyllum demersum
Cfa011935 Carpinus fangiana
Cfa011937 Carpinus fangiana
Cfa021766 Carpinus fangiana
Ciclev10020878m.g Citrus clementina
CiPaw.11G113600 Carya illinoinensis
CiPaw.12G078400 Carya illinoinensis
COL.COLO4_10783 Corchorus olitorius
COL.COLO4_10784 Corchorus olitorius
COL.COLO4_10785 Corchorus olitorius
Cpa.g.sc175.15 Carica papaya
Cre01.g015550 Chlamydomonas reinhardtii
CsaV3_3G000920 Cucumis sativus L.
CSS0010282 Camellia sinensis var. sinensis
CSS0021441 Camellia sinensis var. sinensis
DCAR_009092 Daucus carota
Dinv38683 Davidia involucrata
Duzib068G0872 Durio zibethinus
Duzib084G0313 Durio zibethinus
Duzib205G1059 Durio zibethinus
EL10Ac5g12450 Beta vulgaris
EL10Ac5g12452 Beta vulgaris
EL10Ac6g14266 Beta vulgaris
Eucgr.D01688 Eucalyptus grandis
FAN13G1570 Fragaria x ananassa
FAN18G2309 Fragaria x ananassa
FAN18G2679 Fragaria x ananassa
FvH4_5g11021 Fragaria vesca
Glyma.07G166800 Glycine max
Gohir.A02G097800 Gossypium hirsutum
Gohir.D03G086700 Gossypium hirsutum
Gorai.003G075400 Gossypium raimondii
HanXRQChr06g0166861 Helianthus annuus
Haze_09152 Corylus avellana
Haze_14076 Corylus avellana
Haze_14077 Corylus avellana
Haze_16436 Corylus avellana
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla
HPP92_008886 Vanilla planifolia
Lalb_Chr17g0338551 Lupinus albus
Lj2g0026928 Lotus japonicus
Lj8A201T86 Lonicera japonica
Lsat_1_v5_gn_3_13681 Lactuca sativa
Manes.11G125600 Manihot esculenta
Mapoly0141s0022 Marchantia polymorpha
MBI12_g30966_MAGBIO Magnolia biondii
MD06G1117400 Malus domestica
MD14G1124600 Malus domestica
Medtr1g031790 Medicago truncatula
MELO3C013779.2 Cucumis melo
Migut.E00635 Erythranthe guttata
Migut.O00797 Erythranthe guttata
MSTRG.13719 Avicennia marina
Nitab4.5_0000673g0130 Nicotiana tabacum
Nitab4.5_0001962g0040 Nicotiana tabacum
Nn1g00366 Nelumbo nucifera
Oeu022039.1 Olea europaea
Oeu022040.1 Olea europaea
Os09g0529900 Oryza sativa ssp. japonica
Peaxi162Scf00102g01878 Petunia axillaris
PGSC0003DMG400005851 Solanum tuberosum
Phvul.003G021600 Phaseolus vulgaris
Potri.001G084900 Populus trichocarpa
Potri.003G145700 Populus trichocarpa
Pp3c17_4700 Physcomitrium patens
PRCOL_00003301 Prasinoderma coloniale
Prupe.2G052300 Prunus persica
Prupe.5G128500 Prunus persica
Psat6g044760 Pisum sativum
PSO135G0880 Papaver somniferum
PSO384G4439 Papaver somniferum
QL02p029158 Quercus lobata
QL02p029160 Quercus lobata
QL02p029165 Quercus lobata
QL02p029171 Quercus lobata
QL02p029191 Quercus lobata
QL02p029212 Quercus lobata
RcHm_v2.0_Chr7g0186781 Rosa chinensis
Rhsim02G0251300 Rhododendron simsii
Sabra03G0105900 Salix brachista
Sc01g0010580 Simmondsia chinensis
Sc01g0010590 Simmondsia chinensis
Sc16g0011220 Simmondsia chinensis
Sed0016376 Sechium edule
SEGI_30656 Sequoiadendron giganteum
Solyc08g008530.1 Solanum lycopersicum
Sopen08g004380 Solanum pennellii
Sp6g06750 Schrenkiella parvula
Sp7g22040 Schrenkiella parvula
TAR629G1984 Trochodendron aralioides
THA.LOC104813054 Tarenaya hassleriana
THA.LOC104815209 Tarenaya hassleriana
Thecc.03G222400 Theobroma cacao
Thecc.03G222500 Theobroma cacao
Thhalv10026820m.g Eutrema salsugineum
Thhalv10027122m.g Eutrema salsugineum
Thhalv10027505m.g Eutrema salsugineum
Thhalv10029450m.g Eutrema salsugineum
TPR.G36963 Trifolium pratense
TWI60G1311 Tripterygium wilfordii
unitig_52.g17196 Utricularia gibba
unitig_52.g17197 Utricularia gibba
vmacro11510 Vaccinium macrocarpon
VMungo0647G2082 Vigna mungo
VMungo1215G2928 Vigna mungo
Zm00001eb103220 Zea mays
Zm00001eb207470 Zea mays
Zm00001eb207480 Zea mays
Zm00001eb314200 Zea mays
Zm00001eb366680 Zea mays

User provided reference genes

Program Settings