Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26790 Brassica napus
A09p39040 Brassica napus
Aa31LG7G9320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1213 Anthoceros agrestis
Actinidia12430 Actinidia chinensis
Ah.04g149470 Amaranthus hybridus
AL1G40150 Arabidopsis lyrata
AL358U10020 Arabidopsis lyrata
AL4G18740 Arabidopsis lyrata
AL5G11470 Arabidopsis lyrata
AL5G19970 Arabidopsis lyrata
Aqoxy3G04109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2I20T3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0K2UA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L1YRVI Arachis hypogaea
AT1G24807 Arabidopsis thaliana
AT1G24909 Arabidopsis thaliana
AT1G25083 Arabidopsis thaliana
AT1G25155 Arabidopsis thaliana
AT1G25220 Arabidopsis thaliana
AT5G57890 Arabidopsis thaliana
ATR0100G040 Amborella trichopoda
ATR0598G020 Amborella trichopoda
Atru.chr11.745 Acer truncatum
AUR62018550 Chenopodium quinoa
AUR62020869 Chenopodium quinoa
BcaB03g12041 Brassica carinata
BcaC01g01671 Brassica carinata
BcaC05g26495 Brassica carinata
BcaC05g26695 Brassica carinata
BcaC06g35239 Brassica carinata
BolC3t19615H Brassica oleracea
BolC5t31275H Brassica oleracea
BolC7t42345H Brassica oleracea
BraA08t34625Z Brassica rapa
BraA09t39404Z Brassica rapa
C03p73170 Brassica napus
C05p25470 Brassica napus
C07p18350 Brassica napus
CAN.G551.33 Capsicum annuum
CANSAT78G2066 Cannabis sativa
CARHR026340 Cardamine hirsuta
CARHR028690 Cardamine hirsuta
Carub.0001s2535 Capsella rubella
Ca_26339_v3 Cicer arietinum L.
Ca_28977_v3 Cicer arietinum L.
Ca_29558_v3 Cicer arietinum L.
Cc00_g17040 Coffea canephora
Cc11_g05880 Coffea canephora
CDE05G1639 Ceratophyllum demersum
CDE05G2824 Ceratophyllum demersum
CDE11G0429 Ceratophyllum demersum
Cfa015064 Carpinus fangiana
Ciclev10016176m.g Citrus clementina
Ciclev10030067m.g Citrus clementina
Ciclev10030118m.g Citrus clementina
CiPaw.06G059200 Carya illinoinensis
ClCG06G008470 Citrullus lanatus
ClCG07G006850 Citrullus lanatus
ClCG07G006860 Citrullus lanatus
ClCG07G006870 Citrullus lanatus
COL.COLO4_27591 Corchorus olitorius
Cpa.g.sc2.136 Carica papaya
Cre14.g620300 Chlamydomonas reinhardtii
CsaV3_5G015330 Cucumis sativus L.
CSS0004353 Camellia sinensis var. sinensis
Dinv05685 Davidia involucrata
Dinv14372 Davidia involucrata
Duzib248G0975 Durio zibethinus
Duzib268G0992 Durio zibethinus
ECA233G0760 Erigeron canadensis
ECA246G0293 Erigeron canadensis
EL10Ac3g07448 Beta vulgaris
Eucgr.A00016 Eucalyptus grandis
Eucgr.B02421 Eucalyptus grandis
FAN07G1936 Fragaria x ananassa
FAN12G1558 Fragaria x ananassa
FAN17G0269 Fragaria x ananassa
FAN22G1456 Fragaria x ananassa
FvH4_4g33060 Fragaria vesca
Glyma.07G175000 Glycine max
Glyma.16G058800 Glycine max
Gohir.A03G112800 Gossypium hirsutum
Gohir.A12G154000 Gossypium hirsutum
Gohir.A13G030100 Gossypium hirsutum
Gohir.D02G137151 Gossypium hirsutum
Gohir.D12G157100 Gossypium hirsutum
Gohir.D13G028101 Gossypium hirsutum
Gorai.005G153300 Gossypium raimondii
Gorai.008G169900 Gossypium raimondii
Gorai.013G032100 Gossypium raimondii
GSVIVG01011602001 Vitis vinifera
HanXRQChr08g0224861 Helianthus annuus
HanXRQChr12g0366151 Helianthus annuus
Haze_10827 Corylus avellana
Hma1.2p1_0037F.1_g023780 Hydrangea macrophylla
HPP92_010989 Vanilla planifolia
Hund19014 Selenicereus undatus
Lalb_Chr07g0187831 Lupinus albus
Lalb_Chr12g0209351 Lupinus albus
Lj2g0017484 Lotus japonicus
Lj3C860T0 Lonicera japonica
Lj6A732T67 Lonicera japonica
Lsat_1_v5_gn_8_34800 Lactuca sativa
Manes.15G137900 Manihot esculenta
Manes.17G087200 Manihot esculenta
Mapoly0037s0136 Marchantia polymorpha
MBI19_g25215_MAGBIO Magnolia biondii
MCO13G279 Micromonas commoda
MD13G1016400 Malus domestica
MD16G1013900 Malus domestica
Medtr1g033480 Medicago truncatula
MELO3C018290.2 Cucumis melo
Migut.E00508 Erythranthe guttata
MSTRG.13642 Avicennia marina
Nitab4.5_0000283g0460 Nicotiana tabacum
Nitab4.5_0001478g0080 Nicotiana tabacum
Nitab4.5_0002315g0030 Nicotiana tabacum
Nn4g24498 Nelumbo nucifera
Oeu044076.2 Olea europaea
Os03g0718000 Oryza sativa ssp. japonica
Os04g0463500 Oryza sativa ssp. japonica
Peaxi162Scf00062g00418 Petunia axillaris
PGR102G0108 Punica granatum
Phvul.003G014300 Phaseolus vulgaris
Potri.008G138800 Populus trichocarpa
Potri.010G102200 Populus trichocarpa
Pp3c10_17060 Physcomitrium patens
Pp3c3_33470 Physcomitrium patens
PRCOL_00000049 Prasinoderma coloniale
Prupe.1G337100 Prunus persica
Psat6g095080 Pisum sativum
PSO339G3678 Papaver somniferum
PSO356G0033 Papaver somniferum
PSO675G6890 Papaver somniferum
QL03p038834 Quercus lobata
QL03p038897 Quercus lobata
RcHm_v2.0_Chr3g0486701 Rosa chinensis
RcHm_v2.0_Chr3g0486721 Rosa chinensis
RcHm_v2.0_Chr4g0388381 Rosa chinensis
RcHm_v2.0_Chr4g0388411 Rosa chinensis
RcHm_v2.0_Chr4g0388431 Rosa chinensis
RcHm_v2.0_Chr4g0442101 Rosa chinensis
RcHm_v2.0_Chr4g0442111 Rosa chinensis
Rhsim09G0086300 Rhododendron simsii
Sabra08G0105500 Salix brachista
Sabra10G0075000 Salix brachista
SalBow5G2331 Salvia bowleyana
SalBow5G2576 Salvia bowleyana
Sc08g0003180 Simmondsia chinensis
Sed0000196 Sechium edule
SEGI_15310 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10117 Striga asiatica
SGA_v2.0_scaffold3G01748 Striga asiatica
SMO194G0036 Selaginella moellendorffii
SMO358G0246 Selaginella moellendorffii
SMO358G0613 Selaginella moellendorffii
Solyc12g010180.2 Solanum lycopersicum
Sopen12g005050 Solanum pennellii
Sp1g23070 Schrenkiella parvula
TAR622G0111 Trochodendron aralioides
TAR629G3105 Trochodendron aralioides
THA.LOC104809791 Tarenaya hassleriana
Thecc.02G305000 Theobroma cacao
Thhalv10008447m.g Eutrema salsugineum
TPR.G34556 Trifolium pratense
TWI56G0668 Tripterygium wilfordii
TWI74G1079 Tripterygium wilfordii
unitig_699.g19470 Utricularia gibba
VMungo1215G1104 Vigna mungo
Zm00001eb055320 Zea mays
Zm00001eb066090 Zea mays
Zm00001eb080510 Zea mays
Zm00001eb232460 Zea mays
Zm00001eb424380 Zea mays

User provided reference genes

Program Settings