Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p34620 Brassica napus
Aa31LG11G3070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4122 Anthoceros agrestis
Actinidia18312 Actinidia chinensis
Actinidia18313 Actinidia chinensis
Actinidia25530 Actinidia chinensis
Actinidia25531 Actinidia chinensis
Ah.02g114660 Amaranthus hybridus
AL6G34990 Arabidopsis lyrata
Aqoxy5G03175 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1NY8SK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2VM69K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JJXJ29 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.US1BEE Arachis hypogaea
AT5G23720 Arabidopsis thaliana
ATR0693G246 Amborella trichopoda
Atru.chr6.1901 Acer truncatum
AUR62009517 Chenopodium quinoa
AUR62034771 Chenopodium quinoa
BcaNung01843 Brassica carinata
BcaNung01844 Brassica carinata
BolC7t44915H Brassica oleracea
BraA06t26390Z Brassica rapa
C07p43870 Brassica napus
CAN.G843.24 Capsicum annuum
CANSAT56G3290 Cannabis sativa
CARHR189830 Cardamine hirsuta
Carub.0006s2147 Capsella rubella
Ca_10885_v3 Cicer arietinum L.
Ca_14153_v3 Cicer arietinum L.
Ca_16085_v3 Cicer arietinum L.
Ca_17584_v3 Cicer arietinum L.
Cc04_g05920 Coffea canephora
CDE01G0794 Ceratophyllum demersum
CDE05G1848 Ceratophyllum demersum
CDE05G3070 Ceratophyllum demersum
CDE05G3337 Ceratophyllum demersum
CDE12G0830 Ceratophyllum demersum
Cfa018720 Carpinus fangiana
Ciclev10030650m.g Citrus clementina
CiPaw.11G001400 Carya illinoinensis
ClCG06G018320 Citrullus lanatus
COL.COLO4_37237 Corchorus olitorius
Cpa.g.sc4.108 Carica papaya
Cre08.g375000 Chlamydomonas reinhardtii
CsaV3_1G000110 Cucumis sativus L.
CSS0000982 Camellia sinensis var. sinensis
CSS0005251 Camellia sinensis var. sinensis
CSS0005263 Camellia sinensis var. sinensis
CSS0008437 Camellia sinensis var. sinensis
CSS0014341 Camellia sinensis var. sinensis
CSS0018148 Camellia sinensis var. sinensis
CSS0026541 Camellia sinensis var. sinensis
CSS0032153 Camellia sinensis var. sinensis
CSS0039620 Camellia sinensis var. sinensis
CSS0048257 Camellia sinensis var. sinensis
DCAR_021407 Daucus carota
DCAR_025658 Daucus carota
DCAR_031844 Daucus carota
Dinv13736 Davidia involucrata
Dinv23210 Davidia involucrata
Dinv44484 Davidia involucrata
Duzib084G0479 Durio zibethinus
Duzib205G0834 Durio zibethinus
ECA232G3506 Erigeron canadensis
ECA232G4466 Erigeron canadensis
EL10Ac5g11306 Beta vulgaris
Eucgr.B00073 Eucalyptus grandis
FAN04G0251 Fragaria x ananassa
FAN04G0599 Fragaria x ananassa
FAN08G3345 Fragaria x ananassa
FAN13G1995 Fragaria x ananassa
FAN18G3345 Fragaria x ananassa
FvH4_5g09220 Fragaria vesca
Glyma.04G200300 Glycine max
Glyma.05G201200 Glycine max
Glyma.06G165302 Glycine max
Glyma.08G008600 Glycine max
Gohir.A09G248100 Gossypium hirsutum
Gohir.D09G248900 Gossypium hirsutum
Gorai.006G273300 Gossypium raimondii
GSVIVG01008633001 Vitis vinifera
HanXRQChr09g0273931 Helianthus annuus
HanXRQChr16g0498871 Helianthus annuus
Haze_07113 Corylus avellana
Hma1.2p1_1070F.1_g254120 Hydrangea macrophylla
Hma1.2p1_1171F.1_g263500 Hydrangea macrophylla
HPP92_006911 Vanilla planifolia
Hund02497 Selenicereus undatus
Hund10056 Selenicereus undatus
Lalb_Chr12g0202411 Lupinus albus
Lalb_Chr13g0297021 Lupinus albus
Lalb_Chr23g0272921 Lupinus albus
Lj1g0007025 Lotus japonicus
Lj4g0027174 Lotus japonicus
Lj5A88T63 Lonicera japonica
Lj9A485G82 Lonicera japonica
Lsat_1_v5_gn_4_84700 Lactuca sativa
Manes.06G125700 Manihot esculenta
Mapoly0001s0178 Marchantia polymorpha
Mapoly0024s0055 Marchantia polymorpha
Mapoly0146s0001 Marchantia polymorpha
MBI19_g26308_MAGBIO Magnolia biondii
MCO05G714 Micromonas commoda
MD06G1132400 Malus domestica
MD14G1148800 Malus domestica
Medtr3g498735 Medicago truncatula
Medtr8g100000 Medicago truncatula
MELO3C026163.2 Cucumis melo
Migut.I00610 Erythranthe guttata
MSTRG.11233 Avicennia marina
Nitab4.5_0000663g0190 Nicotiana tabacum
Nitab4.5_0002450g0020 Nicotiana tabacum
Nitab4.5_0007632g0020 Nicotiana tabacum
Nn1g02170 Nelumbo nucifera
Nn3g16303 Nelumbo nucifera
Nn4g22168 Nelumbo nucifera
Os01g0311500 Oryza sativa ssp. japonica
Os01g0347000 Oryza sativa ssp. japonica
Peaxi162Scf00314g00535 Petunia axillaris
PGR083G0225 Punica granatum
PGSC0003DMG401014249 Solanum tuberosum
PGSC0003DMG402014249 Solanum tuberosum
Phvul.002G282600 Phaseolus vulgaris
Phvul.003G092400 Phaseolus vulgaris
Phvul.009G164700 Phaseolus vulgaris
Potri.012G105800 Populus trichocarpa
Potri.015G105000 Populus trichocarpa
Pp3c9_1160 Physcomitrium patens
Pp3c9_1168 Physcomitrium patens
Prupe.5G143400 Prunus persica
Psat5g054480 Pisum sativum
Psat5g054520 Pisum sativum
Psat7g039040 Pisum sativum
PSO591G0475 Papaver somniferum
PSO832G3889 Papaver somniferum
QL10p000901 Quercus lobata
RcHm_v2.0_Chr4g0416471 Rosa chinensis
RcHm_v2.0_Chr7g0188941 Rosa chinensis
RcHm_v2.0_Chr7g0194331 Rosa chinensis
Rhsim08G0195900 Rhododendron simsii
Sabra12G0078100 Salix brachista
Sabra15G0125200 Salix brachista
SalBow7G4845 Salvia bowleyana
Sc04g0000260 Simmondsia chinensis
Sed0025035 Sechium edule
SEGI_36335 Sequoiadendron giganteum
SGA_v2.0_scaffold143G35744 Striga asiatica
SHI14117 Sapria himalayana
SHI14119 Sapria himalayana
SHI14120 Sapria himalayana
SHI14124 Sapria himalayana
SMO116G0359 Selaginella moellendorffii
Solyc03g118350.4 Solanum lycopersicum
Sopen03g037250 Solanum pennellii
Sp2g23510 Schrenkiella parvula
TAR371G0558 Trochodendron aralioides
TAR371G0735 Trochodendron aralioides
THA.LOC104821537 Tarenaya hassleriana
Thecc.03G138500 Theobroma cacao
Thhalv10003616m.g Eutrema salsugineum
TPR.G12812 Trifolium pratense
TPR.G21586 Trifolium pratense
TPR.G30827 Trifolium pratense
TWI14G0519 Tripterygium wilfordii
TWI39G0366 Tripterygium wilfordii
unitig_22.g6271 Utricularia gibba
vmacro19166 Vaccinium macrocarpon
VMungo0251G0815 Vigna mungo
VMungo0464G0734 Vigna mungo
VMungo0540G0604 Vigna mungo
VMungo1215G0490 Vigna mungo
VMungo1309G0598 Vigna mungo
Zm00001eb051840 Zea mays
Zm00001eb130450 Zea mays
Zm00001eb340730 Zea mays

User provided reference genes

Program Settings