Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41880 Brassica napus
A03p36500 Brassica napus
A05p38770 Brassica napus
Aa31LG3G2960 Aethionema arabicum
Aa31LG6G7350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis
Actinidia18607 Actinidia chinensis
Actinidia18608 Actinidia chinensis
AL3G21710 Arabidopsis lyrata
AL491U10010 Arabidopsis lyrata
Aqoxy1G01141 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B1F77T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea
AT3G10380 Arabidopsis thaliana
ATR0730G009 Amborella trichopoda
ATR0730G060 Amborella trichopoda
Atru.chr12.845 Acer truncatum
AUR62013811 Chenopodium quinoa
AUR62023345 Chenopodium quinoa
BcaB04g21214 Brassica carinata
BcaC05g29471 Brassica carinata
BcaC09g48100 Brassica carinata
BcaNung07314 Brassica carinata
BolC1t05404H Brassica oleracea
BolC3t16685H Brassica oleracea
BolC5t34435H Brassica oleracea
BraA01t04258Z Brassica rapa
BraA03t12817Z Brassica rapa
BraA05t22668Z Brassica rapa
BraA05t22669Z Brassica rapa
C03p44100 Brassica napus
C05p57780 Brassica napus
CAN.G321.62 Capsicum annuum
CAN.G796.1 Capsicum annuum
CANSAT56G1655 Cannabis sativa
CARHR084860 Cardamine hirsuta
Carub.0003s0956 Capsella rubella
Ca_00795_v3 Cicer arietinum L.
CBR_g30687 Chara braunii
Cc02_g10910 Coffea canephora
Cc02_g10920 Coffea canephora
Cc03_g09730 Coffea canephora
Cc06_g17220 Coffea canephora
CDE10G0060 Ceratophyllum demersum
CDE10G0301 Ceratophyllum demersum
CDE10G0443 Ceratophyllum demersum
CDE10G1014 Ceratophyllum demersum
Cfa001691 Carpinus fangiana
Ciclev10030617m.g Citrus clementina
CiPaw.01G268500 Carya illinoinensis
CiPaw.02G172100 Carya illinoinensis
CiPaw.02G172200 Carya illinoinensis
ClCG08G007720 Citrullus lanatus
COL.COLO4_34214 Corchorus olitorius
COL.COLO4_34215 Corchorus olitorius
Cpa.g.sc53.132 Carica papaya
Cpa.g.sc53.134 Carica papaya
Cre01.g003050 Chlamydomonas reinhardtii
CsaV3_6G036710 Cucumis sativus L.
CSS0009675 Camellia sinensis var. sinensis
DCAR_019085 Daucus carota
Dinv31232 Davidia involucrata
Duzib114G0598 Durio zibethinus
ECA238G0457 Erigeron canadensis
EL10Ac1g00696 Beta vulgaris
Eucgr.K02187 Eucalyptus grandis
FAN01G1125 Fragaria x ananassa
FAN03G2922 Fragaria x ananassa
FAN06G0006 Fragaria x ananassa
FAN06G1302 Fragaria x ananassa
FAN10G1353 Fragaria x ananassa
FAN10G3044 Fragaria x ananassa
FvH4_7g18760 Fragaria vesca
Glyma.10G207900 Glycine max
Glyma.20G182800 Glycine max
Gohir.A05G414300 Gossypium hirsutum
Gohir.A10G202400 Gossypium hirsutum
Gohir.D04G001800 Gossypium hirsutum
Gohir.D10G210566 Gossypium hirsutum
Gohir.D10G210600 Gossypium hirsutum
Gorai.011G236100 Gossypium raimondii
Gorai.012G002900 Gossypium raimondii
GSVIVG01016219001 Vitis vinifera
HanXRQChr05g0134171 Helianthus annuus
HanXRQChr05g0161261 Helianthus annuus
HanXRQChr14g0455711 Helianthus annuus
HanXRQChr14g0456581 Helianthus annuus
Haze_16845 Corylus avellana
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla
Hma1.2p1_0384F.1_g140760 Hydrangea macrophylla
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla
HPP92_022853 Vanilla planifolia
HPP92_026132 Vanilla planifolia
Hund17145 Selenicereus undatus
Lalb_Chr06g0170321 Lupinus albus
Lalb_Chr21g0313551 Lupinus albus
Lalb_Chr21g0313561 Lupinus albus
Lalb_Chr21g0313681 Lupinus albus
Lalb_Chr21g0313691 Lupinus albus
Lj2C20G12 Lonicera japonica
Lj5g0000763 Lotus japonicus
Lj6g0023100 Lotus japonicus
Lsat_1_v5_gn_2_113061 Lactuca sativa
Lsat_1_v5_gn_4_4660 Lactuca sativa
Lsat_1_v5_gn_6_63420 Lactuca sativa
Lsat_1_v5_gn_9_29220 Lactuca sativa
Manes.01G054600 Manihot esculenta
Mapoly0170s0008 Marchantia polymorpha
MBI18_g27470_MAGBIO Magnolia biondii
MBI18_g27471_MAGBIO Magnolia biondii
MD01G1103100 Malus domestica
MD07G1169800 Malus domestica
Medtr5g017640 Medicago truncatula
Medtr8g104855 Medicago truncatula
MELO3C019825.2 Cucumis melo
Migut.F01955 Erythranthe guttata
MSTRG.27486 Avicennia marina
Nitab4.5_0001450g0090 Nicotiana tabacum
Nitab4.5_0001659g0180 Nicotiana tabacum
Nn3g18724 Nelumbo nucifera
Nn4g25176 Nelumbo nucifera
Oeu007408.1 Olea europaea
Oeu033874.1 Olea europaea
Os08g0318500 Oryza sativa ssp. japonica
Peaxi162Scf00145g01214 Petunia axillaris
Peaxi162Scf00145g01215 Petunia axillaris
PGR044G0607 Punica granatum
Phvul.007G098800 Phaseolus vulgaris
Potri.008G035300 Populus trichocarpa
Potri.010G227100 Populus trichocarpa
Pp3c12_15420 Physcomitrium patens
Pp3c16_24260 Physcomitrium patens
Pp3c3_21120 Physcomitrium patens
Prupe.2G208700 Prunus persica
Prupe.5G231200 Prunus persica
Psat7g009400 Pisum sativum
Psat7g009440 Pisum sativum
PSO063G6915 Papaver somniferum
PSO339G0981 Papaver somniferum
PSO478G0690 Papaver somniferum
QL08p054317 Quercus lobata
QL08p054329 Quercus lobata
RcHm_v2.0_Chr1g0362571 Rosa chinensis
Rhsim03G0115800 Rhododendron simsii
Sabra08G0023600 Salix brachista
Sabra10G0175200 Salix brachista
SalBow4G0398 Salvia bowleyana
Sc06g0007810 Simmondsia chinensis
Sed0018764 Sechium edule
SEGI_25267 Sequoiadendron giganteum
SEGI_27589 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29552 Striga asiatica
SHI08888 Sapria himalayana
SMO172G0221 Selaginella moellendorffii
Solyc11g008340.3 Solanum lycopersicum
Sopen11g004150 Solanum pennellii
Sp3g08650 Schrenkiella parvula
TAR633G0511 Trochodendron aralioides
THA.LOC104826898 Tarenaya hassleriana
Thecc.10G083800 Theobroma cacao
Thhalv10019960m.g Eutrema salsugineum
TPR.G28835 Trifolium pratense
TPR.G32679 Trifolium pratense
TPR.G33031 Trifolium pratense
TPR.G6473 Trifolium pratense
TWI15G0187 Tripterygium wilfordii
TWI63G1397 Tripterygium wilfordii
unitig_46.g18603 Utricularia gibba
vmacro00383 Vaccinium macrocarpon
vmacro00384 Vaccinium macrocarpon
vmacro00385 Vaccinium macrocarpon
vmacro00386 Vaccinium macrocarpon
VMungo0251G3371 Vigna mungo
VMungo0720G2709 Vigna mungo
Zm00001eb330040 Zea mays

User provided reference genes

Program Settings