Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18130 Brassica napus
A09p07640 Brassica napus
A10p18580 Brassica napus
Aa31LG11G1250 Aethionema arabicum
Ah.01g020290 Amaranthus hybridus
AL6G33210 Arabidopsis lyrata
AL8G39200 Arabidopsis lyrata
Aqoxy4G02677 Aquilegia oxysepala
Aqoxy6G00092 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QQFJ2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V52YDZ Arachis hypogaea
AT5G22210 Arabidopsis thaliana
AT5G62370 Arabidopsis thaliana
ATR0743G010 Amborella trichopoda
ATR0743G137 Amborella trichopoda
ATR0772G086 Amborella trichopoda
Atru.chr1.696 Acer truncatum
Atru.chr1.699 Acer truncatum
Atru.chr3.3141 Acer truncatum
AUR62011465 Chenopodium quinoa
AUR62016590 Chenopodium quinoa
BcaB08g36448 Brassica carinata
BcaC04g19558 Brassica carinata
BcaC04g23418 Brassica carinata
BcaNung01400 Brassica carinata
BcaNung03569 Brassica carinata
BcaNung03570 Brassica carinata
BolC1t02243H Brassica oleracea
BolC9t53764H Brassica oleracea
BolC9t58312H Brassica oleracea
BraA01t01768Z Brassica rapa
BraA09t36416Z Brassica rapa
BraA10t43938Z Brassica rapa
C01p23090 Brassica napus
C09p08550 Brassica napus
C09p54430 Brassica napus
CAN.G48.19 Capsicum annuum
CAN.G745.37 Capsicum annuum
CAN.G745.38 Capsicum annuum
CANSAT11G0896 Cannabis sativa
CANSAT54G1521 Cannabis sativa
CARHR191340 Cardamine hirsuta
CARHR276150 Cardamine hirsuta
Carub.0006s1995 Capsella rubella
Carub.0008s2305 Capsella rubella
Cc00_g07030 Coffea canephora
Cc01_g08600 Coffea canephora
Cfa008191 Carpinus fangiana
Cfa009967 Carpinus fangiana
Ciclev10004237m.g Citrus clementina
Ciclev10029713m.g Citrus clementina
CiPaw.03G094900 Carya illinoinensis
ClCG02G008790 Citrullus lanatus
ClCG02G022390 Citrullus lanatus
COL.COLO4_14135 Corchorus olitorius
COL.COLO4_22656 Corchorus olitorius
Cpa.g.sc52.133 Carica papaya
CsaV3_3G016180 Cucumis sativus L.
CsaV3_6G038520 Cucumis sativus L.
CSS0004960 Camellia sinensis var. sinensis
CSS0005035 Camellia sinensis var. sinensis
CSS0025690 Camellia sinensis var. sinensis
CSS0026764 Camellia sinensis var. sinensis
CSS0027551 Camellia sinensis var. sinensis
CSS0048267 Camellia sinensis var. sinensis
DCAR_002545 Daucus carota
DCAR_013070 Daucus carota
DCAR_029158 Daucus carota
Dinv08130 Davidia involucrata
Dinv28563 Davidia involucrata
Duzib150G1666 Durio zibethinus
Duzib205G1466 Durio zibethinus
ECA233G1567 Erigeron canadensis
ECA238G1997 Erigeron canadensis
EL10Ac9g21860 Beta vulgaris
Eucgr.D00222 Eucalyptus grandis
Eucgr.J00540 Eucalyptus grandis
Glyma.08G290000 Glycine max
Glyma.18G134500 Glycine max
Gohir.A03G058201 Gossypium hirsutum
Gohir.A07G112200 Gossypium hirsutum
Gohir.D03G107900 Gossypium hirsutum
Gohir.D07G115700 Gossypium hirsutum
Gorai.001G124000 Gossypium raimondii
Gorai.003G114200 Gossypium raimondii
GSVIVG01018516001 Vitis vinifera
GSVIVG01036058001 Vitis vinifera
HanXRQChr05g0142511 Helianthus annuus
HanXRQChr09g0248811 Helianthus annuus
Haze_13863 Corylus avellana
Haze_23328 Corylus avellana
Hma1.2p1_0793F.1_g218650 Hydrangea macrophylla
HPP92_003270 Vanilla planifolia
Lalb_Chr09g0335081 Lupinus albus
Lj8C41T2 Lonicera japonica
Lsat_1_v5_gn_8_8880 Lactuca sativa
Manes.15G055100 Manihot esculenta
MBI01_g04527_MAGBIO Magnolia biondii
MBI04_g11438_MAGBIO Magnolia biondii
MBI04_g20761_MAGBIO Magnolia biondii
MBI18_g28520_MAGBIO Magnolia biondii
MD03G1152900 Malus domestica
MELO3C006816.2 Cucumis melo
MELO3C014515.2 Cucumis melo
Migut.D02414 Erythranthe guttata
Migut.F00464 Erythranthe guttata
MSTRG.8816 Avicennia marina
Nitab4.5_0000893g0020 Nicotiana tabacum
Nitab4.5_0001135g0190 Nicotiana tabacum
Nitab4.5_0002149g0030 Nicotiana tabacum
Nitab4.5_0002556g0070 Nicotiana tabacum
Nitab4.5_0002816g0010 Nicotiana tabacum
Nitab4.5_0009543g0010 Nicotiana tabacum
Nn1g01091 Nelumbo nucifera
Nn6g34748 Nelumbo nucifera
Oeu023215.2 Olea europaea
Os10g0116000 Oryza sativa ssp. japonica
Peaxi162Scf00224g00092 Petunia axillaris
Peaxi162Scf00241g00015 Petunia axillaris
PGR142G2422 Punica granatum
PGSC0003DMG400019630 Solanum tuberosum
PGSC0003DMG402014825 Solanum tuberosum
Phvul.003G054000 Phaseolus vulgaris
Potri.004G200900 Populus trichocarpa
Potri.004G201000 Populus trichocarpa
Potri.009G162200 Populus trichocarpa
Prupe.6G140000 Prunus persica
PSO339G0200 Papaver somniferum
PSO384G0061 Papaver somniferum
QL01p011344 Quercus lobata
QL05p001270 Quercus lobata
QL09p019427 Quercus lobata
RcHm_v2.0_Chr5g0047291 Rosa chinensis
Sabra04G0136000 Salix brachista
Sabra09G0126700 Salix brachista
Sabra15G0031500 Salix brachista
Sabra15G0031600 Salix brachista
Sabra15G0044600 Salix brachista
Sabra15G0045800 Salix brachista
Sabra15G0046300 Salix brachista
Sabra15G0046400 Salix brachista
Sabra15G0048400 Salix brachista
Sabra15G0048500 Salix brachista
Sabra15G0052000 Salix brachista
Sabra15G0052100 Salix brachista
Sabra15G0053100 Salix brachista
Sabra15G0053200 Salix brachista
Sabra15G0053900 Salix brachista
Sabra15G0054000 Salix brachista
Sabra15G0060100 Salix brachista
Sabra15G0060200 Salix brachista
SalBow6G3564 Salvia bowleyana
Sc03g0003650 Simmondsia chinensis
Sed0001623 Sechium edule
Sed0002680 Sechium edule
SEGI_02268 Sequoiadendron giganteum
SEGI_31848 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01188 Striga asiatica
Solyc03g093150.3 Solanum lycopersicum
Solyc11g068810.2 Solanum lycopersicum
Sopen03g023950 Solanum pennellii
Sopen11g027530 Solanum pennellii
Sp2g25540 Schrenkiella parvula
Sp6g23020 Schrenkiella parvula
TAR375G0346 Trochodendron aralioides
TAR633G2299 Trochodendron aralioides
THA.LOC104799562 Tarenaya hassleriana
THA.LOC104821407 Tarenaya hassleriana
Thecc.03G157100 Theobroma cacao
Thecc.09G155000 Theobroma cacao
Thecc.09G275700 Theobroma cacao
Thhalv10003595m.g Eutrema salsugineum
TWI31G0968 Tripterygium wilfordii
TWI39G0436 Tripterygium wilfordii
unitig_0.g1469 Utricularia gibba
vmacro09901 Vaccinium macrocarpon

User provided reference genes

Program Settings