Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05920 Brassica napus
A02p40140 Brassica napus
A03p16430 Brassica napus
A07p30930 Brassica napus
A10p19810 Brassica napus
Aa31LG10G8100 Aethionema arabicum
Aa31LG3G7440 Aethionema arabicum
Aa31LG3G7450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1595 Anthoceros agrestis
Actinidia18301 Actinidia chinensis
Ah.11g046900 Amaranthus hybridus
AL6G31450 Arabidopsis lyrata
AL8G25160 Arabidopsis lyrata
Aqoxy1G00170 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.86AC6C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9UH1TF Arachis hypogaea
AT5G19920 Arabidopsis thaliana
AT5G50970 Arabidopsis thaliana
ATR0582G269 Amborella trichopoda
Atru.chr6.1916 Acer truncatum
AUR62009537 Chenopodium quinoa
AUR62041701 Chenopodium quinoa
AUR62041703 Chenopodium quinoa
BcaB08g36556 Brassica carinata
BcaC01g06062 Brassica carinata
BcaC04g19398 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01950 Brassica napus
BolC2t06996H Brassica oleracea
BolC3t14318H Brassica oleracea
BolC9t58480H Brassica oleracea
BraA02t05544Z Brassica rapa
BraA03t10933Z Brassica rapa
BraA10t44057Z Brassica rapa
C03p19320 Brassica napus
C09p56130 Brassica napus
CANSAT56G1634 Cannabis sativa
CARHR192930 Cardamine hirsuta
CARHR192940 Cardamine hirsuta
CARHR257220 Cardamine hirsuta
Carub.0006s1829 Capsella rubella
Carub.0008s1099 Capsella rubella
Ca_10878_v3 Cicer arietinum L.
CBR_g3752 Chara braunii
Cc03_g15560 Coffea canephora
Cc04_g05880 Coffea canephora
CDE02G0369 Ceratophyllum demersum
CDE02G2184 Ceratophyllum demersum
Cfa018707 Carpinus fangiana
Ciclev10031176m.g Citrus clementina
CiPaw.11G001000 Carya illinoinensis
ClCG03G004040 Citrullus lanatus
ClCG06G018370 Citrullus lanatus
COL.COLO4_37254 Corchorus olitorius
Cpa.g.sc13.168 Carica papaya
CsaV3_1G000070 Cucumis sativus L.
CsaV3_1G009920 Cucumis sativus L.
CSS0006697 Camellia sinensis var. sinensis
CSS0040569 Camellia sinensis var. sinensis
CSS0040784 Camellia sinensis var. sinensis
DCAR_016341 Daucus carota
DCAR_021401 Daucus carota
Dinv13723 Davidia involucrata
Dinv23223 Davidia involucrata
Duzib084G0567 Durio zibethinus
ECA246G0638 Erigeron canadensis
ECA246G3168 Erigeron canadensis
EL10Ac5g11286 Beta vulgaris
Eucgr.K00065 Eucalyptus grandis
Eucgr.L01124 Eucalyptus grandis
Eucgr.L01129 Eucalyptus grandis
FAN04G0277 Fragaria x ananassa
FAN08G0744 Fragaria x ananassa
FAN13G1049 Fragaria x ananassa
FAN18G1571 Fragaria x ananassa
FvH4_5g09480 Fragaria vesca
Glyma.04G201300 Glycine max
Glyma.06G163900 Glycine max
Gohir.A03G056200 Gossypium hirsutum
Gohir.A07G046700 Gossypium hirsutum
Gohir.D03G110400 Gossypium hirsutum
Gohir.D07G051000 Gossypium hirsutum
Gorai.001G054100 Gossypium raimondii
Gorai.003G116700 Gossypium raimondii
GSVIVG01008647001 Vitis vinifera
HanXRQChr05g0155401 Helianthus annuus
HanXRQChr17g0565911 Helianthus annuus
Haze_07098 Corylus avellana
Hma1.2p1_0664F.1_g199006 Hydrangea macrophylla
HPP92_011657 Vanilla planifolia
HPP92_011707 Vanilla planifolia
HPP92_028338 Vanilla planifolia
Hund02509 Selenicereus undatus
Hund10040 Selenicereus undatus
Lalb_Chr11g0069181 Lupinus albus
Lalb_Chr12g0202501 Lupinus albus
Lalb_Chr12g0202511 Lupinus albus
Lj1g0015188 Lotus japonicus
Lj4g0027413 Lotus japonicus
Lj5C87G6 Lonicera japonica
Lj5C87T10 Lonicera japonica
Lj9C486T6 Lonicera japonica
Lsat_1_v5_gn_4_84501 Lactuca sativa
Lsat_1_v5_gn_5_10121 Lactuca sativa
Manes.06G126801 Manihot esculenta
Mapoly0008s0248 Marchantia polymorpha
MBI03_g13042_MAGBIO Magnolia biondii
MBI07_g41261_MAGBIO Magnolia biondii
MD06G1130900 Malus domestica
MD14G1147500 Malus domestica
Medtr3g098600 Medicago truncatula
Medtr8g100180 Medicago truncatula
MELO3C002386.2 Cucumis melo
MELO3C026159.2 Cucumis melo
Migut.I00618 Erythranthe guttata
MSTRG.22849 Avicennia marina
Nitab4.5_0000976g0020 Nicotiana tabacum
Nitab4.5_0002584g0020 Nicotiana tabacum
Nitab4.5_0008403g0010 Nicotiana tabacum
Nn4g22021 Nelumbo nucifera
Oeu012846.1 Olea europaea
Oeu046606.1 Olea europaea
Oeu061253.1 Olea europaea
Os03g0851600 Oryza sativa ssp. japonica
Os08g0511500 Oryza sativa ssp. japonica
Peaxi162Scf00314g00638 Petunia axillaris
Peaxi162Scf01168g00013 Petunia axillaris
PGR083G2644 Punica granatum
PGSC0003DMG400014242 Solanum tuberosum
Phvul.002G281600 Phaseolus vulgaris
Phvul.009G161300 Phaseolus vulgaris
Potri.012G108100 Populus trichocarpa
Potri.015G106300 Populus trichocarpa
Pp3c11_18210 Physcomitrium patens
Prupe.5G142100 Prunus persica
Psat5g055040 Pisum sativum
PSO339G4968 Papaver somniferum
PSO384G2792 Papaver somniferum
QL10p000509 Quercus lobata
RcHm_v2.0_Chr1g0373351 Rosa chinensis
RcHm_v2.0_Chr7g0188721 Rosa chinensis
Rhsim08G0197300 Rhododendron simsii
Sabra12G0079300 Salix brachista
Sabra15G0126400 Salix brachista
SalBow7G2108 Salvia bowleyana
Sc04g0000200 Simmondsia chinensis
Sc22g0003380 Simmondsia chinensis
Sed0008211 Sechium edule
Sed0022051 Sechium edule
SEGI_10226 Sequoiadendron giganteum
SEGI_28594 Sequoiadendron giganteum
SEGI_34710 Sequoiadendron giganteum
SGA_v2.0_scaffold74G24722 Striga asiatica
SHI34430 Sapria himalayana
SHI34431 Sapria himalayana
SMO334G0050 Selaginella moellendorffii
Solyc03g118210.3 Solanum lycopersicum
Solyc03g118220.3 Solanum lycopersicum
Solyc12g042200.2 Solanum lycopersicum
Sopen03g037130 Solanum pennellii
Sopen12g021240 Solanum pennellii
Sp6g13140 Schrenkiella parvula
Sp6g24460 Schrenkiella parvula
TAR622G0096 Trochodendron aralioides
THA.LOC104825039 Tarenaya hassleriana
Thecc.03G140300 Theobroma cacao
Thhalv10013007m.g Eutrema salsugineum
Thhalv10013209m.g Eutrema salsugineum
TPR.G12938 Trifolium pratense
TPR.G25960 Trifolium pratense
TWI23G0486 Tripterygium wilfordii
TWI39G0398 Tripterygium wilfordii
unitig_21.g20335 Utricularia gibba
vmacro19182 Vaccinium macrocarpon
VMungo1309G0830 Vigna mungo
Zm00001eb064630 Zea mays
Zm00001eb210690 Zea mays

User provided reference genes

Program Settings