Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09740 Brassica napus
Aa31sc339G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis
Actinidia25226 Actinidia chinensis
Actinidia29916 Actinidia chinensis
Actinidia39693 Actinidia chinensis
Ah.09g231260 Amaranthus hybridus
Ah.14g085030 Amaranthus hybridus
AL7G44300 Arabidopsis lyrata
Aqoxy7G03992 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea
AT5G35460 Arabidopsis thaliana
ATR0051G045 Amborella trichopoda
Atru.chr7.1654 Acer truncatum
AUR62025170 Chenopodium quinoa
AUR62029007 Chenopodium quinoa
BcaB02g08054 Brassica carinata
BcaB06g26940 Brassica carinata
BcaC02g09478 Brassica carinata
BcaNung06959 Brassica carinata
BolC4t25903H Brassica oleracea
BraA04t16636Z Brassica rapa
C04p43240 Brassica napus
CAN.G33.23 Capsicum annuum
CANSAT56G0340 Cannabis sativa
CARHR217480 Cardamine hirsuta
Carub.0007s3126 Capsella rubella
Ca_13142_v3 Cicer arietinum L.
CBR_g16039 Chara braunii
Cc02_g26660 Coffea canephora
Cc06_g11850 Coffea canephora
CDE05G2698 Ceratophyllum demersum
CDE05G3050 Ceratophyllum demersum
Cfa003038 Carpinus fangiana
Cfa024865 Carpinus fangiana
Ciclev10010674m.g Citrus clementina
Ciclev10020772m.g Citrus clementina
CiPaw.04G146900 Carya illinoinensis
ClCG03G015300 Citrullus lanatus
COL.COLO4_18144 Corchorus olitorius
COL.COLO4_18145 Corchorus olitorius
Cpa.g.c48203 Carica papaya
Cpa.g.sc28.102 Carica papaya
Cpa.g.sc28.103 Carica papaya
Cre03.g207351 Chlamydomonas reinhardtii
Cre14.g620200 Chlamydomonas reinhardtii
CsaV3_1G040740 Cucumis sativus L.
CSS0012417 Camellia sinensis var. sinensis
CSS0040908 Camellia sinensis var. sinensis
DCAR_024721 Daucus carota
DCAR_028283 Daucus carota
Dinv36802 Davidia involucrata
Duzib150G0174 Durio zibethinus
Duzib168G1513 Durio zibethinus
ECA234G3560 Erigeron canadensis
ECA236G0065 Erigeron canadensis
EL10Ac8g19144 Beta vulgaris
Eucgr.C03403 Eucalyptus grandis
FAN19G1405 Fragaria x ananassa
FAN23G0579 Fragaria x ananassa
FAN26G0968 Fragaria x ananassa
FAN26G2539 Fragaria x ananassa
FAN28G0363 Fragaria x ananassa
FvH4_1g08120 Fragaria vesca
Glyma.09G067100 Glycine max
Glyma.13G107500 Glycine max
Glyma.15G173000 Glycine max
Glyma.17G051800 Glycine max
Gohir.A06G074600 Gossypium hirsutum
Gohir.A13G192500 Gossypium hirsutum
Gohir.D06G073400 Gossypium hirsutum
Gohir.D13G197900 Gossypium hirsutum
Gohir.D13G197975 Gossypium hirsutum
Gorai.010G085700 Gossypium raimondii
Gorai.013G226600 Gossypium raimondii
GSVIVG01015145001 Vitis vinifera
HanXRQChr04g0126061 Helianthus annuus
HanXRQChr10g0319561 Helianthus annuus
Haze_25957 Corylus avellana
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla
HPP92_005531 Vanilla planifolia
Hund08710 Selenicereus undatus
Lalb_Chr08g0232451 Lupinus albus
Lj4A288T21 Lonicera japonica
Lj4g0010970 Lotus japonicus
Lj6g0022796 Lotus japonicus
Lj7A681T64 Lonicera japonica
Lsat_1_v5_gn_5_142140 Lactuca sativa
Lsat_1_v5_gn_8_86281 Lactuca sativa
Manes.16G098400 Manihot esculenta
Mapoly0061s0008 Marchantia polymorpha
MBI05_g23628_MAGBIO Magnolia biondii
MCO07G676 Micromonas commoda
MD02G1085700 Malus domestica
MD15G1212900 Malus domestica
Medtr1g008180 Medicago truncatula
Medtr2g039830 Medicago truncatula
Medtr2g039840 Medicago truncatula
Medtr2g040600 Medicago truncatula
Medtr4g125680 Medicago truncatula
MELO3C015502.2 Cucumis melo
Migut.J00961 Erythranthe guttata
Migut.L01537 Erythranthe guttata
MSTRG.26453 Avicennia marina
Nitab4.5_0001488g0140 Nicotiana tabacum
Nitab4.5_0003493g0050 Nicotiana tabacum
Nitab4.5_0006849g0020 Nicotiana tabacum
Nn6g35566 Nelumbo nucifera
Oeu000306.1 Olea europaea
Oeu035943.1 Olea europaea
Os01g0585100 Oryza sativa ssp. japonica
Peaxi162Scf00219g00019 Petunia axillaris
Peaxi162Scf00724g00210 Petunia axillaris
PGR044G0734 Punica granatum
PGSC0003DMG400019544 Solanum tuberosum
PGSC0003DMG400020950 Solanum tuberosum
Phvul.003G133400 Phaseolus vulgaris
Phvul.009G229400 Phaseolus vulgaris
Potri.006G145600 Populus trichocarpa
Potri.018G051100 Populus trichocarpa
Pp3c2_27340 Physcomitrium patens
Pp3c3_9180 Physcomitrium patens
PRCOL_00002316 Prasinoderma coloniale
Prupe.7G204000 Prunus persica
Psat1g133240 Pisum sativum
PSO017G0759 Papaver somniferum
PSO210G0448 Papaver somniferum
PSO210G0608 Papaver somniferum
QL02p061312 Quercus lobata
QL02p061443 Quercus lobata
RcHm_v2.0_Chr1g0313941 Rosa chinensis
RcHm_v2.0_Chr1g0340041 Rosa chinensis
RcHm_v2.0_Chr2g0094171 Rosa chinensis
Rhsim03G0230700 Rhododendron simsii
Rhsim05G0013300 Rhododendron simsii
Sabra06G0115100 Salix brachista
Sabra18G0047600 Salix brachista
SalBow1G5979 Salvia bowleyana
Sc18g0002350 Simmondsia chinensis
Sed0004197 Sechium edule
SEGI_24858 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09454 Striga asiatica
SGA_v2.0_scaffold23G10060 Striga asiatica
SMO169G0099 Selaginella moellendorffii
SMO271G0136 Selaginella moellendorffii
Solyc07g041160.3 Solanum lycopersicum
Sopen07g020420 Solanum pennellii
Sp7g06850 Schrenkiella parvula
TAR623G1298 Trochodendron aralioides
TAR624G1217 Trochodendron aralioides
TAR636G0030 Trochodendron aralioides
THA.LOC104808900 Tarenaya hassleriana
Thecc.09G082200 Theobroma cacao
Thhalv10003454m.g Eutrema salsugineum
TPR.G18106 Trifolium pratense
TPR.G277 Trifolium pratense
TPR.G9462 Trifolium pratense
TWI32G0099 Tripterygium wilfordii
TWI34G1861 Tripterygium wilfordii
unitig_26.g9177 Utricularia gibba
vmacro06308 Vaccinium macrocarpon
vmacro17169 Vaccinium macrocarpon
VMungo1215G1067 Vigna mungo
VMungo1309G1594 Vigna mungo
Zm00001eb122080 Zea mays
Zm00001eb160510 Zea mays
Zm00001eb198340 Zea mays
Zm00001eb242980 Zea mays
Zm00001eb304220 Zea mays
Zm00001eb356980 Zea mays
Zm00001eb362060 Zea mays

User provided reference genes

Program Settings