Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p09570 Brassica napus
Aa31sc598G40 Aethionema arabicum
Actinidia04245 Actinidia chinensis
Actinidia13211 Actinidia chinensis
Actinidia21911 Actinidia chinensis
Actinidia23308 Actinidia chinensis
Ah.10g035700 Amaranthus hybridus
Ah.16g104800 Amaranthus hybridus
AL7G43940 Arabidopsis lyrata
Aqoxy7G00610 Aquilegia oxysepala
Aqoxy7G03536 Aquilegia oxysepala
AT5G35090 Arabidopsis thaliana
ATR0629G091 Amborella trichopoda
ATR0763G001 Amborella trichopoda
Atru.chr7.2498 Acer truncatum
Atru.chr7.265 Acer truncatum
AUR62011257 Chenopodium quinoa
AUR62012444 Chenopodium quinoa
AUR62031569 Chenopodium quinoa
AUR62041449 Chenopodium quinoa
BcaB04g18063 Brassica carinata
BcaC07g37678 Brassica carinata
BolC8t48050H Brassica oleracea
BraA08t32954Z Brassica rapa
CAN.G551.21 Capsicum annuum
CANSAT11G0887 Cannabis sativa
CARHR217160 Cardamine hirsuta
Carub.0007s3088 Capsella rubella
Ca_21615_v3 Cicer arietinum L.
Cc06_g07430 Coffea canephora
Cc08_g00220 Coffea canephora
CDE02G0310 Ceratophyllum demersum
Cfa013102 Carpinus fangiana
Ciclev10009935m.g Citrus clementina
CiPaw.07G226900 Carya illinoinensis
CiPaw.15G182500 Carya illinoinensis
CiPaw.15G182600 Carya illinoinensis
ClCG02G017250 Citrullus lanatus
ClCG05G016610 Citrullus lanatus
COL.COLO4_18912 Corchorus olitorius
COL.COLO4_24105 Corchorus olitorius
Cpa.g.sc46.86 Carica papaya
CsaV3_2G003540 Cucumis sativus L.
CsaV3_4G036890 Cucumis sativus L.
CSS0007982 Camellia sinensis var. sinensis
CSS0019227 Camellia sinensis var. sinensis
CSS0049905 Camellia sinensis var. sinensis
Dinv11721 Davidia involucrata
Dinv15887 Davidia involucrata
Dinv41425 Davidia involucrata
Duzib150G0809 Durio zibethinus
Duzib168G2018 Durio zibethinus
ECA236G4020 Erigeron canadensis
EL10Ac2g04157 Beta vulgaris
EL10Ac8g18819 Beta vulgaris
Eucgr.C00437 Eucalyptus grandis
Eucgr.C01632 Eucalyptus grandis
Eucgr.C01639 Eucalyptus grandis
Eucgr.C01640 Eucalyptus grandis
Eucgr.C01687 Eucalyptus grandis
Eucgr.C01690 Eucalyptus grandis
Eucgr.C01694 Eucalyptus grandis
Eucgr.C01695 Eucalyptus grandis
Eucgr.C01698 Eucalyptus grandis
Eucgr.C01699 Eucalyptus grandis
Eucgr.C01701 Eucalyptus grandis
Eucgr.L03259 Eucalyptus grandis
FAN19G0689 Fragaria x ananassa
FAN23G1308 Fragaria x ananassa
FAN26G0199 Fragaria x ananassa
FAN28G0460 Fragaria x ananassa
Glyma.13G157500 Glycine max
Glyma.14G112500 Glycine max
Glyma.17G105200 Glycine max
Gohir.A05G011500 Gossypium hirsutum
Gohir.A05G056900 Gossypium hirsutum
Gohir.A07G030200 Gossypium hirsutum
Gohir.A13G203200 Gossypium hirsutum
Gohir.D05G012200 Gossypium hirsutum
Gohir.D05G059000 Gossypium hirsutum
Gohir.D07G034000 Gossypium hirsutum
Gohir.D13G208500 Gossypium hirsutum
Gorai.001G035600 Gossypium raimondii
Gorai.009G012500 Gossypium raimondii
Gorai.009G060100 Gossypium raimondii
Gorai.013G237600 Gossypium raimondii
HanXRQChr05g0141561 Helianthus annuus
Haze_19321 Corylus avellana
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla
HPP92_005341 Vanilla planifolia
HPP92_006060 Vanilla planifolia
HPP92_020075 Vanilla planifolia
HPP92_020081 Vanilla planifolia
HPP92_023807 Vanilla planifolia
Lalb_Chr12g0198511 Lupinus albus
Lalb_Chr13g0301201 Lupinus albus
Lj4g0023658 Lotus japonicus
Lsat_1_v5_gn_5_39780 Lactuca sativa
Lsat_1_v5_gn_8_63081 Lactuca sativa
Manes.03G012100 Manihot esculenta
Manes.14G138428 Manihot esculenta
MBI14_g03633_MAGBIO Magnolia biondii
Medtr4g116500 Medicago truncatula
MELO3C004442.2 Cucumis melo
MELO3C016989.2 Cucumis melo
Migut.A00008 Erythranthe guttata
Migut.K00379 Erythranthe guttata
MSTRG.10635 Avicennia marina
MSTRG.10639 Avicennia marina
MSTRG.26029 Avicennia marina
Nitab4.5_0000069g0040 Nicotiana tabacum
Nitab4.5_0001751g0090 Nicotiana tabacum
Nitab4.5_0002992g0060 Nicotiana tabacum
Nitab4.5_0010572g0020 Nicotiana tabacum
Nitab4.5_0017863g0010 Nicotiana tabacum
Nn2g12243 Nelumbo nucifera
Nn8g39714 Nelumbo nucifera
Oeu010893.1 Olea europaea
Oeu057292.1 Olea europaea
Os08g0293100 Oryza sativa ssp. japonica
Peaxi162Scf00116g00085 Petunia axillaris
Peaxi162Scf00315g00011 Petunia axillaris
Peaxi162Scf00391g00017 Petunia axillaris
Peaxi162Scf01184g00133 Petunia axillaris
PGR031G2169 Punica granatum
PGR142G4289 Punica granatum
PGSC0003DMG400005307 Solanum tuberosum
PGSC0003DMG400029901 Solanum tuberosum
PGSC0003DMG400030696 Solanum tuberosum
PGSC0003DMG400036991 Solanum tuberosum
Phvul.003G174600 Phaseolus vulgaris
Prupe.7G255000 Prunus persica
Psat4g033280 Pisum sativum
PSO675G3576 Papaver somniferum
PSO732G0403 Papaver somniferum
QL02p091243 Quercus lobata
RcHm_v2.0_Chr2g0086701 Rosa chinensis
Rhsim02G0205800 Rhododendron simsii
SalBow1G8303 Salvia bowleyana
Sc08g0005750 Simmondsia chinensis
Sc23g0006550 Simmondsia chinensis
Sc23g0006560 Simmondsia chinensis
Sc23g0006570 Simmondsia chinensis
Sed0009487 Sechium edule
Sed0014973 Sechium edule
Sed0021780 Sechium edule
SGA_v2.0_scaffold500G52494 Striga asiatica
SGA_v2.0_scaffold64G21997 Striga asiatica
Solyc01g011390.2 Solanum lycopersicum
Solyc07g007150.1 Solanum lycopersicum
Solyc08g041810.1 Solanum lycopersicum
Solyc12g010430.1 Solanum lycopersicum
Sopen01g007400 Solanum pennellii
Sopen07g003200 Solanum pennellii
Sopen08g011970 Solanum pennellii
Sopen12g005450 Solanum pennellii
Sp7g07270 Schrenkiella parvula
TAR383G0074 Trochodendron aralioides
TAR625G0404 Trochodendron aralioides
TAR626G0029 Trochodendron aralioides
TAR636G2249 Trochodendron aralioides
THA.LOC104808923 Tarenaya hassleriana
THA.LOC104815394 Tarenaya hassleriana
Thecc.09G019700 Theobroma cacao
Thecc.09G141500 Theobroma cacao
Thhalv10005689m.g Eutrema salsugineum
TPR.G15776 Trifolium pratense
TWI34G0986 Tripterygium wilfordii
TWI34G1900 Tripterygium wilfordii
TWI34G1911 Tripterygium wilfordii
unitig_27.g25091 Utricularia gibba
VMungo1215G0564 Vigna mungo

User provided reference genes

Program Settings