Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18770 Brassica napus
A04p25820 Brassica napus
A05p12030 Brassica napus
A07p11490 Brassica napus
A08p25930 Brassica napus
A09p38020 Brassica napus
Aa31LG9G13440 Aethionema arabicum
Aa31sc415G10 Aethionema arabicum
Actinidia22131 Actinidia chinensis
Actinidia30604 Actinidia chinensis
Ah.02g131150 Amaranthus hybridus
Ah.03g135740 Amaranthus hybridus
AL1G41580 Arabidopsis lyrata
AL4G29180 Arabidopsis lyrata
Aqoxy5G03211 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.25I2B1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GKU1A2 Arachis hypogaea
AT1G28070 Arabidopsis thaliana
AT2G33510 Arabidopsis thaliana
ATR0582G076 Amborella trichopoda
Atru.chr1.737 Acer truncatum
Atru.chr11.2403 Acer truncatum
BcaB01g03931 Brassica carinata
BcaB02g10569 Brassica carinata
BcaB03g13960 Brassica carinata
BcaB06g28694 Brassica carinata
BcaC01g00004 Brassica carinata
BcaC01g05837 Brassica carinata
BcaC02g07799 Brassica carinata
BcaC02g11436 Brassica carinata
BcaC05g26622 Brassica carinata
BcaC05g26624 Brassica carinata
BcaC05g26810 Brassica carinata
BcaC06g35328 Brassica carinata
BolC3t19720H Brassica oleracea
BolC4t23129H Brassica oleracea
BolC4t27780H Brassica oleracea
BolC5t31398H Brassica oleracea
BolC7t42238H Brassica oleracea
BraA03t11137Z Brassica rapa
BraA04t18084Z Brassica rapa
BraA05t20145Z Brassica rapa
BraA07t28938Z Brassica rapa
BraA08t34544Z Brassica rapa
BraA09t39312Z Brassica rapa
C03p21930 Brassica napus
C03p74720 Brassica napus
C04p15610 Brassica napus
C04p63030 Brassica napus
C05p26740 Brassica napus
C07p17340 Brassica napus
CAN.G1277.6 Capsicum annuum
CANSAT56G0023 Cannabis sativa
CARHR027520 Cardamine hirsuta
CARHR127520 Cardamine hirsuta
Carub.0001s2650 Capsella rubella
Carub.0004s1514 Capsella rubella
Ca_06512_v3 Cicer arietinum L.
Cc11_g17440 Coffea canephora
CDE02G1122 Ceratophyllum demersum
CDE06G0253 Ceratophyllum demersum
CDE09G1092 Ceratophyllum demersum
Cfa009411 Carpinus fangiana
Ciclev10032280m.g Citrus clementina
CiPaw.05G103900 Carya illinoinensis
CiPaw.06G107600 Carya illinoinensis
ClCG06G001810 Citrullus lanatus
ClCG07G011730 Citrullus lanatus
COL.COLO4_11740 Corchorus olitorius
Cpa.g.sc123.52 Carica papaya
CsaV3_4G002470 Cucumis sativus L.
CsaV3_6G007850 Cucumis sativus L.
CSS0002178 Camellia sinensis var. sinensis
CSS0023603 Camellia sinensis var. sinensis
CSS0031909 Camellia sinensis var. sinensis
CSS0048086 Camellia sinensis var. sinensis
DCAR_024638 Daucus carota
Dinv17895 Davidia involucrata
Duzib052G1223 Durio zibethinus
Duzib248G0844 Durio zibethinus
Duzib251G0690 Durio zibethinus
ECA233G5077 Erigeron canadensis
EL10Ac6g13584 Beta vulgaris
Eucgr.H03380 Eucalyptus grandis
FAN07G1723 Fragaria x ananassa
FAN12G2512 Fragaria x ananassa
FAN17G1317 Fragaria x ananassa
FvH4_4g23070 Fragaria vesca
Glyma.18G302000 Glycine max
Gohir.A01G021200 Gossypium hirsutum
Gohir.A12G140400 Gossypium hirsutum
Gohir.D01G019600 Gossypium hirsutum
Gohir.D12G145000 Gossypium hirsutum
Gorai.002G022000 Gossypium raimondii
Gorai.008G156400 Gossypium raimondii
GSVIVG01000957001 Vitis vinifera
HanXRQChr08g0210131 Helianthus annuus
HanXRQChr12g0362341 Helianthus annuus
Haze_12469 Corylus avellana
Hma1.2p1_0459F.1_g157230 Hydrangea macrophylla
HPP92_006446 Vanilla planifolia
HPP92_011550 Vanilla planifolia
HPP92_023087 Vanilla planifolia
Hund25497 Selenicereus undatus
Lalb_Chr04g0257091 Lupinus albus
Lalb_Chr14g0375131 Lupinus albus
Lalb_Chr22g0349911 Lupinus albus
Lj1g0012774 Lotus japonicus
Lj6C835T0 Lonicera japonica
Lsat_1_v5_gn_4_1260 Lactuca sativa
Lsat_1_v5_gn_8_147160 Lactuca sativa
Manes.08G103100 Manihot esculenta
Manes.09G185900 Manihot esculenta
MBI01_g34379_MAGBIO Magnolia biondii
MBI07_g37482_MAGBIO Magnolia biondii
MBI11_g37080_MAGBIO Magnolia biondii
MD13G1126400 Malus domestica
MD16G1126900 Malus domestica
Medtr7g005500 Medicago truncatula
MELO3C017796.2 Cucumis melo
MELO3C022347.2 Cucumis melo
Migut.K01036 Erythranthe guttata
MSTRG.468 Avicennia marina
MSTRG.8041 Avicennia marina
Nitab4.5_0001600g0080 Nicotiana tabacum
Nitab4.5_0007554g0020 Nicotiana tabacum
Nn3g16325 Nelumbo nucifera
Nn4g22193 Nelumbo nucifera
Oeu003280.1 Olea europaea
Oeu019428.1 Olea europaea
Os02g0516400 Oryza sativa ssp. japonica
Peaxi162Scf00128g01760 Petunia axillaris
Peaxi162Scf00758g00054 Petunia axillaris
PGR057G0001 Punica granatum
PGR119G2322 Punica granatum
PGSC0003DMG400030000 Solanum tuberosum
Phvul.008G000400 Phaseolus vulgaris
Potri.001G062000 Populus trichocarpa
Potri.003G165800 Populus trichocarpa
Prupe.1G219000 Prunus persica
Psat0s2399g0040 Pisum sativum
PSO017G3780 Papaver somniferum
PSO229G0040 Papaver somniferum
PSO478G1150 Papaver somniferum
PSO675G4434 Papaver somniferum
QL03p050330 Quercus lobata
RcHm_v2.0_Chr4g0429341 Rosa chinensis
Rhsim12G0020700 Rhododendron simsii
Sabra01G0044600 Salix brachista
Sabra03G0121000 Salix brachista
SalBow2G1659 Salvia bowleyana
Sc11g0000210 Simmondsia chinensis
Sed0012192 Sechium edule
Sed0024018 Sechium edule
SGA_v2.0_scaffold80G25944 Striga asiatica
Solyc01g009770.3 Solanum lycopersicum
Sopen01g005310 Solanum pennellii
Sp1g24250 Schrenkiella parvula
Sp4g15850 Schrenkiella parvula
TAR622G0782 Trochodendron aralioides
TAR629G0662 Trochodendron aralioides
THA.LOC104812600 Tarenaya hassleriana
THA.LOC104814203 Tarenaya hassleriana
THA.LOC104820530 Tarenaya hassleriana
Thecc.02G196200 Theobroma cacao
Thhalv10008849m.g Eutrema salsugineum
Thhalv10017284m.g Eutrema salsugineum
TPR.G15634 Trifolium pratense
TWI18G0914 Tripterygium wilfordii
TWI36G1280 Tripterygium wilfordii
TWI75G0242 Tripterygium wilfordii
unitig_26.g10423 Utricularia gibba
unitig_747.g21116 Utricularia gibba
unitig_749.g13321 Utricularia gibba
vmacro22632 Vaccinium macrocarpon
VMungo1383G2332 Vigna mungo

User provided reference genes

Program Settings