Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00100 Brassica napus
A02p43350 Brassica napus
A06p31280 Brassica napus
A09p08700 Brassica napus
Aa31LG1G17380 Aethionema arabicum
Aa31LG3G17400 Aethionema arabicum
Aa31sc1834G20 Aethionema arabicum
Actinidia00250 Actinidia chinensis
Actinidia28070 Actinidia chinensis
Actinidia38971 Actinidia chinensis
Ah.09g232110 Amaranthus hybridus
Ah.14g085400 Amaranthus hybridus
AL6G20100 Arabidopsis lyrata
AL8G41940 Arabidopsis lyrata
Aqoxy6G00464 Aquilegia oxysepala
AT5G09670 Arabidopsis thaliana
AT5G64550 Arabidopsis thaliana
ATR0564G216 Amborella trichopoda
Atru.chr10.2100 Acer truncatum
Atru.chr10.2101 Acer truncatum
Atru.chr6.908 Acer truncatum
AUR62027385 Chenopodium quinoa
AUR62031300 Chenopodium quinoa
BcaB04g19973 Brassica carinata
BcaB05g21539 Brassica carinata
BcaB07g29747 Brassica carinata
BcaC03g13269 Brassica carinata
BcaC03g18430 Brassica carinata
BcaC04g23312 Brassica carinata
BolC2t12411H Brassica oleracea
BolC3t18432H Brassica oleracea
BolC9t53891H Brassica oleracea
BraA02t04995Z Brassica rapa
BraA02t09261Z Brassica rapa
BraA06t26067Z Brassica rapa
BraA09t36518Z Brassica rapa
C02p63440 Brassica napus
C03p61710 Brassica napus
C09p09830 Brassica napus
CAN.G523.95 Capsicum annuum
CANSAT11G0470 Cannabis sativa
CARHR203720 Cardamine hirsuta
CARHR278520 Cardamine hirsuta
Carub.0008s2535 Capsella rubella
Ca_18336_v3 Cicer arietinum L.
Cc02_g21840 Coffea canephora
CDE02G0069 Ceratophyllum demersum
CDE05G0576 Ceratophyllum demersum
CDE05G1767 Ceratophyllum demersum
Cfa005579 Carpinus fangiana
Ciclev10000572m.g Citrus clementina
CiPaw.05G038900 Carya illinoinensis
CiPaw.06G151200 Carya illinoinensis
ClCG06G009720 Citrullus lanatus
COL.COLO4_20869 Corchorus olitorius
Cpa.g.sc0.13 Carica papaya
CsaV3_2G011200 Cucumis sativus L.
CSS0000527 Camellia sinensis var. sinensis
CSS0022227 Camellia sinensis var. sinensis
DCAR_029216 Daucus carota
Dinv19323 Davidia involucrata
Dinv24217 Davidia involucrata
Dinv24218 Davidia involucrata
Duzib052G0219 Durio zibethinus
Duzib248G1667 Durio zibethinus
ECA234G1426 Erigeron canadensis
ECA236G3037 Erigeron canadensis
EL10Ac8g19340 Beta vulgaris
Eucgr.I02691 Eucalyptus grandis
FAN04G2665 Fragaria x ananassa
FAN13G1550 Fragaria x ananassa
FvH4_5g30651 Fragaria vesca
Glyma.05G120100 Glycine max
Glyma.08G074900 Glycine max
Gohir.A03G171700 Gossypium hirsutum
Gohir.A13G065700 Gossypium hirsutum
Gohir.D02G195000 Gossypium hirsutum
Gohir.D13G056000 Gossypium hirsutum
Gorai.005G217900 Gossypium raimondii
Gorai.013G063300 Gossypium raimondii
GSVIVG01038733001 Vitis vinifera
HanXRQChr10g0293231 Helianthus annuus
HanXRQChr11g0337121 Helianthus annuus
Haze_09989 Corylus avellana
Haze_09990 Corylus avellana
Haze_09992 Corylus avellana
Haze_10775 Corylus avellana
Haze_27105 Corylus avellana
Hma1.2p1_0217F.1_g091680 Hydrangea macrophylla
Hma1.2p1_0217F.1_g091695 Hydrangea macrophylla
Hma1.2p1_0217F.1_g091700 Hydrangea macrophylla
Hma1.2p1_0217F.1_g091710 Hydrangea macrophylla
Hma1.2p1_0217F.1_g091720 Hydrangea macrophylla
Hma1.2p1_0217F.1_g091740 Hydrangea macrophylla
Hma1.2p1_0557F.1_g178060 Hydrangea macrophylla
HPP92_016461 Vanilla planifolia
HPP92_027148 Vanilla planifolia
Hund06704 Selenicereus undatus
Lalb_Chr07g0189461 Lupinus albus
Lalb_Chr12g0208491 Lupinus albus
Lalb_Chr13g0291591 Lupinus albus
Lj4g0008212 Lotus japonicus
Lj5C243T4 Lonicera japonica
Lj9P318T69 Lonicera japonica
Lsat_1_v5_gn_5_106681 Lactuca sativa
Lsat_1_v5_gn_7_80140 Lactuca sativa
Manes.04G062400 Manihot esculenta
Mapoly0048s0020 Marchantia polymorpha
MBI05_g29099_MAGBIO Magnolia biondii
MBI05_g29100_MAGBIO Magnolia biondii
MBI05_g46461_MAGBIO Magnolia biondii
MD08G1221900 Malus domestica
MD15G1414300 Malus domestica
Medtr4g094290 Medicago truncatula
MELO3C020350.2 Cucumis melo
Migut.B00637 Erythranthe guttata
MSTRG.16566 Avicennia marina
Nitab4.5_0002865g0100 Nicotiana tabacum
Nitab4.5_0003748g0020 Nicotiana tabacum
Nn1g05173 Nelumbo nucifera
Nn5g28887 Nelumbo nucifera
Oeu000233.2 Olea europaea
Oeu037125.1 Olea europaea
Oeu037196.1 Olea europaea
Oeu037198.2 Olea europaea
Os02g0575700 Oryza sativa ssp. japonica
Os04g0458200 Oryza sativa ssp. japonica
Os04g0640900 Oryza sativa ssp. japonica
Peaxi162Scf00001g00041 Petunia axillaris
Peaxi162Scf00001g00043 Petunia axillaris
Peaxi162Scf00003g00367 Petunia axillaris
Peaxi162Scf00152g01123 Petunia axillaris
PGSC0003DMG400029740 Solanum tuberosum
Phvul.002G206700 Phaseolus vulgaris
Potri.001G206600 Populus trichocarpa
Potri.003G023300 Populus trichocarpa
Prupe.1G559700 Prunus persica
Psat7g097440 Pisum sativum
PSO541G3622 Papaver somniferum
PSO675G1096 Papaver somniferum
QL11p019412 Quercus lobata
RcHm_v2.0_Chr7g0225521 Rosa chinensis
Rhsim11G0134700 Rhododendron simsii
Rhsim11G0135400 Rhododendron simsii
Sabra03G0014600 Salix brachista
Sabra03G0014700 Salix brachista
SalBow5G2159 Salvia bowleyana
SalBow6G3757 Salvia bowleyana
SalBow6G4534 Salvia bowleyana
Sc14g0002710 Simmondsia chinensis
Sed0018276 Sechium edule
SEGI_29670 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17289 Striga asiatica
SMO115G0264 Selaginella moellendorffii
SMO119G0185 Selaginella moellendorffii
Solyc01g104910.3 Solanum lycopersicum
Sopen01g047420 Solanum pennellii
Sp2g27620 Schrenkiella parvula
Sp6g33710 Schrenkiella parvula
TAR381G1468 Trochodendron aralioides
THA.LOC104799580 Tarenaya hassleriana
Thecc.02G143400 Theobroma cacao
Thhalv10003819m.g Eutrema salsugineum
Thhalv10013049m.g Eutrema salsugineum
TPR.G10467 Trifolium pratense
TWI23G1041 Tripterygium wilfordii
TWI59G0617 Tripterygium wilfordii
unitig_62.g23623 Utricularia gibba
vmacro01810 Vaccinium macrocarpon
VMungo0251G0315 Vigna mungo
Zm00001eb068980 Zea mays
Zm00001eb080920 Zea mays
Zm00001eb182980 Zea mays
Zm00001eb244890 Zea mays
Zm00001eb347870 Zea mays
Zm00001eb423980 Zea mays

User provided reference genes

Program Settings