Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p22040 Brassica napus
A03p49170 Brassica napus
Aa31LG9G1910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3276 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.937 Anthoceros agrestis
Actinidia23451 Actinidia chinensis
Actinidia32373 Actinidia chinensis
Actinidia40209 Actinidia chinensis
Ah.11g043140 Amaranthus hybridus
AL7G39990 Arabidopsis lyrata
Aqoxy2G03183 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57CL3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7LSJ4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.989M5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9WT78J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DC6B04 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EQKV61 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5444S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GGZS5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HZTZ4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3NY02 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGH8AH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QGG6DL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S9XVUY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V4Y3U4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YQ8C5N Arachis hypogaea
AT4G15530 Arabidopsis thaliana
ATR0626G228 Amborella trichopoda
Atru.chr4.2704 Acer truncatum
AUR62034328 Chenopodium quinoa
AUR62034949 Chenopodium quinoa
AUR62034950 Chenopodium quinoa
AUR62035455 Chenopodium quinoa
AUR62035456 Chenopodium quinoa
BcaC06g32940 Brassica carinata
BcaC06g33414 Brassica carinata
BcaC09g50243 Brassica carinata
BcaC09g50244 Brassica carinata
BcaC09g50248 Brassica carinata
BcaC09g50249 Brassica carinata
BcaNung00266 Brassica carinata
BolC1t02682H Brassica oleracea
BolC7t45243H Brassica oleracea
BraA01t02110Z Brassica rapa
BraA03t14011Z Brassica rapa
C01p27430 Brassica napus
C07p47210 Brassica napus
CAN.G889.10 Capsicum annuum
CANSAT78G1736 Cannabis sativa
CARHR222330 Cardamine hirsuta
Carub.0007s2635 Capsella rubella
Ca_21564_v3 Cicer arietinum L.
Ca_29369_v3 Cicer arietinum L.
CBR_g50184 Chara braunii
Cc03_g02730 Coffea canephora
CDE02G0811 Ceratophyllum demersum
CDE08G0632 Ceratophyllum demersum
Cfa015539 Carpinus fangiana
Ciclev10006837m.g Citrus clementina
CiPaw.01G156600 Carya illinoinensis
ClCG05G005590 Citrullus lanatus
COL.COLO4_13960 Corchorus olitorius
Cpa.g.sc16.74 Carica papaya
Cre10.g424750 Chlamydomonas reinhardtii
Cre17.g734548 Chlamydomonas reinhardtii
CsaV3_3G013930 Cucumis sativus L.
CSS0013368 Camellia sinensis var. sinensis
CSS0018237 Camellia sinensis var. sinensis
CSS0033563 Camellia sinensis var. sinensis
DCAR_023283 Daucus carota
Dinv44455 Davidia involucrata
Duzib151G0049 Durio zibethinus
Duzib151G0209 Durio zibethinus
Duzib212G0153 Durio zibethinus
ECA240G3955 Erigeron canadensis
EL10Ac1g01820 Beta vulgaris
Eucgr.B01186 Eucalyptus grandis
Eucgr.H03642 Eucalyptus grandis
FAN07G1911 Fragaria x ananassa
FAN12G0499 Fragaria x ananassa
FAN12G2270 Fragaria x ananassa
FAN17G1489 Fragaria x ananassa
FAN22G1243 Fragaria x ananassa
FvH4_4g16670 Fragaria vesca
Glyma.07G253700 Glycine max
Glyma.17G020600 Glycine max
Gohir.A10G105700 Gossypium hirsutum
Gohir.D10G162900 Gossypium hirsutum
Gorai.011G181800 Gossypium raimondii
GSVIVG01017850001 Vitis vinifera
GSVIVG01018502001 Vitis vinifera
HanXRQChr03g0080571 Helianthus annuus
HanXRQChr16g0518081 Helianthus annuus
Haze_01011 Corylus avellana
Hma1.2p1_0511F.1_g169230 Hydrangea macrophylla
Hma1.2p1_2025F.1_g311530 Hydrangea macrophylla
Hund19586 Selenicereus undatus
Hund20662 Selenicereus undatus
Lalb_Chr13g0303991 Lupinus albus
Lj3C806G12 Lonicera japonica
Lj4g0014830 Lotus japonicus
Lsat_1_v5_gn_5_51481 Lactuca sativa
Lsat_1_v5_gn_5_51501 Lactuca sativa
Manes.03G188300 Manihot esculenta
Mapoly0009s0124 Marchantia polymorpha
MCO01G687 Micromonas commoda
MCO12G211 Micromonas commoda
MD13G1177400 Malus domestica
MD13G1177500 Malus domestica
MD16G1179300 Malus domestica
MD16G1179400 Malus domestica
MD16G1179500 Malus domestica
Medtr4g118350 Medicago truncatula
Medtr4g118355 Medicago truncatula
MELO3C006585.2 Cucumis melo
Migut.G00280 Erythranthe guttata
Migut.G00282 Erythranthe guttata
MSTRG.10030 Avicennia marina
MSTRG.10031 Avicennia marina
Nitab4.5_0000059g0230 Nicotiana tabacum
Nitab4.5_0010477g0010 Nicotiana tabacum
Nn3g21184 Nelumbo nucifera
Nn4g26122 Nelumbo nucifera
Oeu032695.1 Olea europaea
Os05g0405000 Oryza sativa ssp. japonica
Peaxi162Scf00095g00414 Petunia axillaris
PGR004G0287 Punica granatum
PGR031G3666 Punica granatum
PGSC0003DMG400032107 Solanum tuberosum
Phvul.003G098200 Phaseolus vulgaris
Potri.010G027800 Populus trichocarpa
Pp3c5_22540 Physcomitrium patens
Pp3c5_22980 Physcomitrium patens
Pp3c6_6540 Physcomitrium patens
Pp3s196_40 Physcomitrium patens
Prupe.1G146600 Prunus persica
Psat0ss7919g0160 Pisum sativum
Psat0ss7919g0200 Pisum sativum
Psat4g028880 Pisum sativum
PSO170G3340 Papaver somniferum
PSO302G0065 Papaver somniferum
QL06p005921 Quercus lobata
QL06p005983 Quercus lobata
QL06p006231 Quercus lobata
RcHm_v2.0_Chr4g0420131 Rosa chinensis
Rhsim02G0016700 Rhododendron simsii
Rhsim04G0213100 Rhododendron simsii
Sabra10G0012900 Salix brachista
SalBow2G1708 Salvia bowleyana
Sc25g0004550 Simmondsia chinensis
Sed0002405 Sechium edule
SGA_v2.0_scaffold142G35643 Striga asiatica
SGA_v2.0_scaffold86G26865 Striga asiatica
SGA_v2.0_scaffold86G26866 Striga asiatica
SMO351G0542 Selaginella moellendorffii
Solyc01g080460.3 Solanum lycopersicum
Sopen01g032260 Solanum pennellii
Sp7g13780 Schrenkiella parvula
TAR365G1004 Trochodendron aralioides
THA.LOC104820228 Tarenaya hassleriana
Thecc.04G272600 Theobroma cacao
Thecc.04G272800 Theobroma cacao
Thhalv10024330m.g Eutrema salsugineum
TPR.G26738 Trifolium pratense
TPR.G28132 Trifolium pratense
TPR.G28133 Trifolium pratense
TPR.G35464 Trifolium pratense
TWI09G0935 Tripterygium wilfordii
unitig_26.g8936 Utricularia gibba
unitig_749.g14056 Utricularia gibba
unitig_749.g14057 Utricularia gibba
vmacro08238 Vaccinium macrocarpon
vmacro15287 Vaccinium macrocarpon
VMungo1215G0684 Vigna mungo
Zm00001eb287770 Zea mays
Zm00001eb349810 Zea mays

User provided reference genes

Program Settings