Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00800 Brassica napus
A09p12640 Brassica napus
A09p59090 Brassica napus
Aa31LG8G16830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis
Actinidia07454 Actinidia chinensis
Actinidia09446 Actinidia chinensis
Actinidia17525 Actinidia chinensis
Actinidia32651 Actinidia chinensis
Actinidia32652 Actinidia chinensis
Actinidia34604 Actinidia chinensis
Actinidia34605 Actinidia chinensis
Actinidia39784 Actinidia chinensis
Ah.14g083230 Amaranthus hybridus
AL3G48340 Arabidopsis lyrata
Aqoxy7G01403 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea
AT2G19880 Arabidopsis thaliana
ATR0681G291 Amborella trichopoda
Atru.chr7.1463 Acer truncatum
AUR62010893 Chenopodium quinoa
AUR62021404 Chenopodium quinoa
BcaB03g16776 Brassica carinata
BcaB08g34891 Brassica carinata
BcaC04g22815 Brassica carinata
BcaC06g36652 Brassica carinata
BcaC07g41232 Brassica carinata
BolC7t40584H Brassica oleracea
BolC8t51799H Brassica oleracea
BolC9t54402H Brassica oleracea
BraA07t27878Z Brassica rapa
BraA09t36909Z Brassica rapa
BraA09t41292Z Brassica rapa
C08p42370 Brassica napus
C09p15000 Brassica napus
CAN.G1241.30 Capsicum annuum
CAN.G195.50 Capsicum annuum
CAN.G3537.1 Capsicum annuum
CANSAT56G2004 Cannabis sativa
CARHR110320 Cardamine hirsuta
Carub.0003s3415 Capsella rubella
Ca_17364_v3 Cicer arietinum L.
Ca_25572_v3 Cicer arietinum L.
Cc06_g10470 Coffea canephora
CDE04G2595 Ceratophyllum demersum
CDE07G1077 Ceratophyllum demersum
Cfa003181 Carpinus fangiana
Ciclev10008006m.g Citrus clementina
CiPaw.03G225300 Carya illinoinensis
CiPaw.04G158000 Carya illinoinensis
ClCG03G016150 Citrullus lanatus
COL.COLO4_34744 Corchorus olitorius
Cpa.g.sc40.95 Carica papaya
Cre09.g409250 Chlamydomonas reinhardtii
CsaV3_1G039780 Cucumis sativus L.
CSS0001350 Camellia sinensis var. sinensis
CSS0033107 Camellia sinensis var. sinensis
DCAR_028664 Daucus carota
Dinv36687 Davidia involucrata
Dinv41667 Davidia involucrata
Duzib168G1367 Durio zibethinus
Duzib187G1161 Durio zibethinus
ECA240G1631 Erigeron canadensis
EL10Ac8g18378 Beta vulgaris
Eucgr.C03729 Eucalyptus grandis
FAN19G1313 Fragaria x ananassa
FAN23G0884 Fragaria x ananassa
FAN26G2948 Fragaria x ananassa
FAN26G2983 Fragaria x ananassa
FAN28G0221 Fragaria x ananassa
FvH4_1g06110 Fragaria vesca
Glyma.01G007900 Glycine max
Glyma.05G226800 Glycine max
Glyma.08G033600 Glycine max
Glyma.16G078400 Glycine max
Gohir.A05G025900 Gossypium hirsutum
Gohir.A06G067200 Gossypium hirsutum
Gohir.D05G027400 Gossypium hirsutum
Gohir.D06G065800 Gossypium hirsutum
Gorai.009G027500 Gossypium raimondii
Gorai.010G077100 Gossypium raimondii
GSVIVG01015303001 Vitis vinifera
HanXRQChr09g0238881 Helianthus annuus
HanXRQChr11g0321631 Helianthus annuus
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla
HPP92_001552 Vanilla planifolia
Hund09103 Selenicereus undatus
Lalb_Chr05g0223231 Lupinus albus
Lalb_Chr09g0331531 Lupinus albus
Lalb_Chr22g0352551 Lupinus albus
Lalb_Chr24g0397311 Lupinus albus
Lj2g0001823 Lotus japonicus
Lj4C389T2 Lonicera japonica
Lj4g0018527 Lotus japonicus
Lj7A665G29 Lonicera japonica
Lsat_1_v5_gn_5_144920 Lactuca sativa
Lsat_1_v5_gn_7_39841 Lactuca sativa
Manes.03G027300 Manihot esculenta
Manes.16G108600 Manihot esculenta
Mapoly0082s0037 Marchantia polymorpha
MBI01_g10128_MAGBIO Magnolia biondii
MCO02G294 Micromonas commoda
MD01G1180200 Malus domestica
MD02G1065600 Malus domestica
MD15G1196500 Malus domestica
Medtr6g088695 Medicago truncatula
Medtr8g102490 Medicago truncatula
Medtr8g102500 Medicago truncatula
MELO3C015411.2 Cucumis melo
Migut.J01101 Erythranthe guttata
Migut.K00540 Erythranthe guttata
MSTRG.19554 Avicennia marina
Nitab4.5_0000566g0060 Nicotiana tabacum
Nitab4.5_0005668g0030 Nicotiana tabacum
Nn8g39063 Nelumbo nucifera
Oeu064178.1 Olea europaea
Os01g0906000 Oryza sativa ssp. japonica
Peaxi162Scf00665g00340 Petunia axillaris
PGR102G1739 Punica granatum
PGSC0003DMG400000296 Solanum tuberosum
Phvul.002G308700 Phaseolus vulgaris
Phvul.004G176200 Phaseolus vulgaris
Potri.006G164864 Populus trichocarpa
Potri.018G087700 Populus trichocarpa
Pp3c16_7990 Physcomitrium patens
Pp3c5_20940 Physcomitrium patens
PRCOL_00001038 Prasinoderma coloniale
Prupe.7G219900 Prunus persica
Psat1g047360 Pisum sativum
Psat7g016920 Pisum sativum
PSO063G1218 Papaver somniferum
PSO210G3120 Papaver somniferum
PSO210G6242 Papaver somniferum
PSO832G3271 Papaver somniferum
QL02p041611 Quercus lobata
RcHm_v2.0_Chr2g0091861 Rosa chinensis
Rhsim03G0236700 Rhododendron simsii
Rhsim05G0040200 Rhododendron simsii
Sabra18G0076000 Salix brachista
SalBow6G3745 Salvia bowleyana
Sc08g0008010 Simmondsia chinensis
Sc18g0001490 Simmondsia chinensis
Sed0021958 Sechium edule
Sed0027745 Sechium edule
SEGI_27682 Sequoiadendron giganteum
SEGI_30237 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08753 Striga asiatica
SGA_v2.0_scaffold62G21557 Striga asiatica
SHI02691 Sapria himalayana
SMO367G0175 Selaginella moellendorffii
Solyc12g008490.2 Solanum lycopersicum
Sopen12g003440 Solanum pennellii
Sp3g33220 Schrenkiella parvula
TAR624G0841 Trochodendron aralioides
TAR626G0478 Trochodendron aralioides
TAR633G1204 Trochodendron aralioides
THA.LOC104804008 Tarenaya hassleriana
THA.LOC104814571 Tarenaya hassleriana
Thecc.09G100700 Theobroma cacao
Thhalv10001962m.g Eutrema salsugineum
TPR.G21381 Trifolium pratense
TPR.G21382 Trifolium pratense
TPR.G23455 Trifolium pratense
TPR.G23479 Trifolium pratense
TWI32G1148 Tripterygium wilfordii
TWI34G0439 Tripterygium wilfordii
unitig_578.g15920 Utricularia gibba
vmacro06252 Vaccinium macrocarpon
vmacro10852 Vaccinium macrocarpon
VMungo0251G2014 Vigna mungo
VMungo0464G1304 Vigna mungo
Zm00001eb132850 Zea mays
Zm00001eb365210 Zea mays

User provided reference genes

Program Settings