Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p41970 Brassica napus
Aa31LG7G6730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis
Actinidia04747 Actinidia chinensis
Actinidia29549 Actinidia chinensis
Ah.05g168180 Amaranthus hybridus
AL1G36320 Arabidopsis lyrata
Aqoxy6G00415 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea
AT1G22770 Arabidopsis thaliana
ATR1120G094 Amborella trichopoda
Atru.chr13.2009 Acer truncatum
AUR62026637 Chenopodium quinoa
AUR62034894 Chenopodium quinoa
BcaNung06971 Brassica carinata
BolC5t30883H Brassica oleracea
BraA09t39685Z Brassica rapa
C05p21880 Brassica napus
CAN.G1225.1 Capsicum annuum
CAN.G26.47 Capsicum annuum
CAN.G495.15 Capsicum annuum
CANSAT25G0323 Cannabis sativa
CANSAT25G0696 Cannabis sativa
CARHR023130 Cardamine hirsuta
Carub.0001s2228 Capsella rubella
Ca_10663_v3 Cicer arietinum L.
CBR_g22347 Chara braunii
Cc04_g15210 Coffea canephora
Cc10_g15270 Coffea canephora
CDE04G1363 Ceratophyllum demersum
CDE04G2370 Ceratophyllum demersum
CDE04G3041 Ceratophyllum demersum
Cfa018280 Carpinus fangiana
Ciclev10004044m.g Citrus clementina
CiPaw.15G012400 Carya illinoinensis
CiPaw.16G008300 Carya illinoinensis
ClCG08G007370 Citrullus lanatus
ClCG09G010210 Citrullus lanatus
COL.COLO4_13782 Corchorus olitorius
COL.COLO4_13783 Corchorus olitorius
Cpa.g.sc26.81 Carica papaya
Cpa.g.sc26.82 Carica papaya
CsaV3_6G005020 Cucumis sativus L.
CsaV3_7G024490 Cucumis sativus L.
CSS0017406 Camellia sinensis var. sinensis
CSS0023419 Camellia sinensis var. sinensis
CSS0032669 Camellia sinensis var. sinensis
DCAR_001164 Daucus carota
Dinv25899 Davidia involucrata
Duzib041G0651 Durio zibethinus
Duzib093G1052 Durio zibethinus
Duzib116G0427 Durio zibethinus
ECA246G0004 Erigeron canadensis
EL10Ac1g01605 Beta vulgaris
Eucgr.F02686 Eucalyptus grandis
FAN15G1441 Fragaria x ananassa
FAN20G1325 Fragaria x ananassa
FAN24G3461 Fragaria x ananassa
FAN27G2428 Fragaria x ananassa
FvH4_2g13030 Fragaria vesca
Glyma.10G221500 Glycine max
Glyma.16G163200 Glycine max
Glyma.20G170000 Glycine max
Gohir.A02G062600 Gossypium hirsutum
Gohir.A05G246500 Gossypium hirsutum
Gohir.D02G068200 Gossypium hirsutum
Gohir.D05G248000 Gossypium hirsutum
Gorai.005G077100 Gossypium raimondii
Gorai.009G258800 Gossypium raimondii
GSVIVG01001405001 Vitis vinifera
GSVIVG01001406001 Vitis vinifera
HanXRQChr10g0278641 Helianthus annuus
HanXRQChr11g0320211 Helianthus annuus
Haze_17805 Corylus avellana
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla
HPP92_008674 Vanilla planifolia
HPP92_008686 Vanilla planifolia
Lalb_Chr01g0009771 Lupinus albus
Lalb_Chr01g0009781 Lupinus albus
Lalb_Chr02g0141571 Lupinus albus
Lalb_Chr06g0161721 Lupinus albus
Lj4A703G54 Lonicera japonica
Lj4C703T11 Lonicera japonica
Lj5g0005273 Lotus japonicus
Lj7A383T43 Lonicera japonica
Lsat_1_v5_gn_2_63220 Lactuca sativa
Lsat_1_v5_gn_3_73081 Lactuca sativa
Lsat_1_v5_gn_3_78320 Lactuca sativa
Lsat_1_v5_gn_5_129380 Lactuca sativa
Lsat_1_v5_gn_5_64561 Lactuca sativa
Lsat_1_v5_gn_6_101520 Lactuca sativa
Lsat_1_v5_gn_6_60101 Lactuca sativa
Lsat_1_v5_gn_7_62680 Lactuca sativa
Lsat_1_v5_gn_8_75660 Lactuca sativa
Lsat_1_v5_gn_9_42181 Lactuca sativa
Manes.18G095000 Manihot esculenta
Mapoly0019s0145 Marchantia polymorpha
MBI04_g08946_MAGBIO Magnolia biondii
MD05G1033400 Malus domestica
MD10G1034200 Malus domestica
Medtr1g098160 Medicago truncatula
MELO3C024067.2 Cucumis melo
MELO3C030034.2 Cucumis melo
Migut.C00380 Erythranthe guttata
Migut.N02951 Erythranthe guttata
MSTRG.22108 Avicennia marina
MSTRG.24931 Avicennia marina
Nitab4.5_0000099g0200 Nicotiana tabacum
Nitab4.5_0000872g0040 Nicotiana tabacum
Nitab4.5_0004270g0010 Nicotiana tabacum
Nitab4.5_0005673g0010 Nicotiana tabacum
Nn008s41421 Nelumbo nucifera
Nn3g20398 Nelumbo nucifera
Nn5g28824 Nelumbo nucifera
Oeu002069.1 Olea europaea
Oeu022058.1 Olea europaea
Oeu051283.1 Olea europaea
Os01g0182600 Oryza sativa ssp. japonica
Peaxi162Scf00160g01744 Petunia axillaris
Peaxi162Scf00360g00418 Petunia axillaris
PGR042G0685 Punica granatum
PGSC0003DMG400001110 Solanum tuberosum
PGSC0003DMG400018791 Solanum tuberosum
Phvul.004G088300 Phaseolus vulgaris
Phvul.007G083500 Phaseolus vulgaris
Potri.002G064400 Populus trichocarpa
Potri.005G196700 Populus trichocarpa
Prupe.8G040600 Prunus persica
Psat0s4455g0040 Pisum sativum
Psat5g166880 Pisum sativum
Psat6g190640 Pisum sativum
Psat7g010640 Pisum sativum
Psat7g010720 Pisum sativum
PSO170G5657 Papaver somniferum
QL02p037499 Quercus lobata
QL02p038017 Quercus lobata
RcHm_v2.0_Chr6g0274251 Rosa chinensis
Rhsim11G0087700 Rhododendron simsii
Sabra02G0051500 Salix brachista
Sabra05G0149800 Salix brachista
SalBow6G3936 Salvia bowleyana
SalBow7G2315 Salvia bowleyana
Sc20g0003770 Simmondsia chinensis
Sed0012183 Sechium edule
Sed0012813 Sechium edule
Sed0019934 Sechium edule
SGA_v2.0_scaffold133G34641 Striga asiatica
SMO367G0140 Selaginella moellendorffii
Solyc04g071990.3 Solanum lycopersicum
Solyc12g056650.2 Solanum lycopersicum
Sopen04g027970 Solanum pennellii
Sopen10g022170 Solanum pennellii
Sopen12g029310 Solanum pennellii
Sp1g20280 Schrenkiella parvula
TAR381G0458 Trochodendron aralioides
TAR381G1674 Trochodendron aralioides
TAR628G1191 Trochodendron aralioides
THA.LOC104810466 Tarenaya hassleriana
Thecc.08G159400 Theobroma cacao
Thhalv10006603m.g Eutrema salsugineum
TPR.G17028 Trifolium pratense
TPR.G25241 Trifolium pratense
TWI32G0799 Tripterygium wilfordii
TWI34G1640 Tripterygium wilfordii
TWI60G0338 Tripterygium wilfordii
unitig_32.g11167 Utricularia gibba
unitig_747.g21544 Utricularia gibba
vmacro01493 Vaccinium macrocarpon
VMungo0464G1293 Vigna mungo
VMungo0464G1608 Vigna mungo
VMungo0720G2354 Vigna mungo
Zm00001eb122110 Zea mays
Zm00001eb337600 Zea mays

User provided reference genes

Program Settings