Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01070 Brassica napus
A03p05100 Brassica napus
A10p26200 Brassica napus
Aa31LG3G15640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1359 Anthoceros agrestis
Actinidia13321 Actinidia chinensis
Actinidia14667 Actinidia chinensis
Actinidia14668 Actinidia chinensis
Actinidia15735 Actinidia chinensis
Ah.05g172920 Amaranthus hybridus
Ah.05g173020 Amaranthus hybridus
Ah.10g035090 Amaranthus hybridus
Ah.16g105420 Amaranthus hybridus
Ah.16g105530 Amaranthus hybridus
Ah.16g105540 Amaranthus hybridus
AL6G22230 Arabidopsis lyrata
Aqoxy7G01531 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6KB6B4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZA6ZKK Arachis hypogaea
AT5G11560 Arabidopsis thaliana
ATR0315G102 Amborella trichopoda
Atru.chr7.2135 Acer truncatum
AUR62009306 Chenopodium quinoa
AUR62041721 Chenopodium quinoa
AUR62043518 Chenopodium quinoa
BcaB01g05472 Brassica carinata
BcaB01g05473 Brassica carinata
BcaB08g37043 Brassica carinata
BcaC03g13375 Brassica carinata
BcaC04g19214 Brassica carinata
BcaNung01934 Brassica carinata
BolC2t06471H Brassica oleracea
BolC3t13096H Brassica oleracea
BolC3t13097H Brassica oleracea
BolC9t59353H Brassica oleracea
BraA02t05087Z Brassica rapa
BraA03t09844Z Brassica rapa
BraA10t44677Z Brassica rapa
C02p05210 Brassica napus
C03p05840 Brassica napus
C03p05850 Brassica napus
C09p65250 Brassica napus
CAN.G1759.1 Capsicum annuum
CANSAT25G2930 Cannabis sativa
CANSAT56G0789 Cannabis sativa
CANSAT56G2409 Cannabis sativa
CARHR201660 Cardamine hirsuta
Carub.0006s1003 Capsella rubella
Ca_15606_v3 Cicer arietinum L.
CBR_g46226 Chara braunii
Cc06_g04830 Coffea canephora
CDE02G1137 Ceratophyllum demersum
CDE09G1231 Ceratophyllum demersum
Cfa013355 Carpinus fangiana
Cfa023291 Carpinus fangiana
Ciclev10007348m.g Citrus clementina
CiPaw.07G205500 Carya illinoinensis
CiPaw.07G205600 Carya illinoinensis
CiPaw.08G024600 Carya illinoinensis
ClCG08G012310 Citrullus lanatus
COL.COLO4_18674 Corchorus olitorius
Cpa.g.sc7.257 Carica papaya
Cre01.g042550 Chlamydomonas reinhardtii
CsaV3_2G030980 Cucumis sativus L.
CSS0015540 Camellia sinensis var. sinensis
DCAR_004485 Daucus carota
DCAR_004486 Daucus carota
DCAR_004489 Daucus carota
Dinv14244 Davidia involucrata
Dinv30270 Davidia involucrata
Dinv34398 Davidia involucrata
Duzib187G0774 Durio zibethinus
ECA233G3193 Erigeron canadensis
EL10Ac2g04048 Beta vulgaris
Eucgr.C02905 Eucalyptus grandis
FAN15G0863 Fragaria x ananassa
FAN20G1017 Fragaria x ananassa
FAN27G3265 Fragaria x ananassa
FvH4_2g35850 Fragaria vesca
Glyma.04G082000 Glycine max
Glyma.06G083700 Glycine max
Gohir.A06G094100 Gossypium hirsutum
Gohir.A08G250500 Gossypium hirsutum
Gohir.A08G250566 Gossypium hirsutum
Gohir.A13G186000 Gossypium hirsutum
Gohir.D06G093700 Gossypium hirsutum
Gohir.D08G272000 Gossypium hirsutum
Gohir.D13G192700 Gossypium hirsutum
Gorai.004G290400 Gossypium raimondii
Gorai.010G108200 Gossypium raimondii
Gorai.013G218700 Gossypium raimondii
GSVIVG01035648001 Vitis vinifera
HanXRQChr08g0221151 Helianthus annuus
Haze_16526 Corylus avellana
Haze_16527 Corylus avellana
Hma1.2p1_0590F.1_g185010 Hydrangea macrophylla
Hma1.2p1_1163F.1_g262780 Hydrangea macrophylla
Hma1.2p1_1163F.1_g262790 Hydrangea macrophylla
HPP92_003925 Vanilla planifolia
Hund19527 Selenicereus undatus
Lalb_Chr08g0243161 Lupinus albus
Lalb_Chr23g0269551 Lupinus albus
Lj1g0011830 Lotus japonicus
Lj6g0012970 Lotus japonicus
Lj7A704G78 Lonicera japonica
Lj7C704T11 Lonicera japonica
Lj8A588G18 Lonicera japonica
Lsat_1_v5_gn_6_63741 Lactuca sativa
Manes.03G061800 Manihot esculenta
Mapoly0001s0045 Marchantia polymorpha
MBI04_g14936_MAGBIO Magnolia biondii
MCO05G363 Micromonas commoda
MD08G1115900 Malus domestica
MD15G1095600 Malus domestica
Medtr3g110090 Medicago truncatula
Medtr3g110140 Medicago truncatula
MELO3C011151.2 Cucumis melo
Migut.J00480 Erythranthe guttata
MSTRG.19211 Avicennia marina
Nitab4.5_0000132g0420 Nicotiana tabacum
Nitab4.5_0004281g0080 Nicotiana tabacum
Nitab4.5_0008726g0020 Nicotiana tabacum
Nitab4.5_0010350g0010 Nicotiana tabacum
Nn2g11661 Nelumbo nucifera
Nn3g18130 Nelumbo nucifera
Nn3g18131 Nelumbo nucifera
Oeu017004.2 Olea europaea
Oeu038879.1 Olea europaea
Os05g0230600 Oryza sativa ssp. japonica
Peaxi162Scf00110g00821 Petunia axillaris
Peaxi162Scf00110g00822 Petunia axillaris
Peaxi162Scf00110g00823 Petunia axillaris
Peaxi162Scf01195g00118 Petunia axillaris
PGR044G0887 Punica granatum
PGSC0003DMG400012982 Solanum tuberosum
Phvul.009G107800 Phaseolus vulgaris
Potri.006G240300 Populus trichocarpa
Potri.018G039800 Populus trichocarpa
Pp3c24_6940 Physcomitrium patens
PRCOL_00001466 Prasinoderma coloniale
Prupe.1G450600 Prunus persica
Psat2g043440 Pisum sativum
Psat5g022720 Pisum sativum
PSO210G0075 Papaver somniferum
PSO210G7231 Papaver somniferum
QL12p029450 Quercus lobata
RcHm_v2.0_Chr6g0305971 Rosa chinensis
Sabra06G0187900 Salix brachista
Sabra18G0039700 Salix brachista
SalBow3G1921 Salvia bowleyana
Sc23g0005190 Simmondsia chinensis
Sed0007642 Sechium edule
Sed0024259 Sechium edule
SGA_v2.0_scaffold40G15445 Striga asiatica
SGA_v2.0_scaffold657G53382 Striga asiatica
SHI18663 Sapria himalayana
SHI18664 Sapria himalayana
SMO361G0709 Selaginella moellendorffii
Solyc09g008610.4 Solanum lycopersicum
Sopen09g003410 Solanum pennellii
Sp6g32040 Schrenkiella parvula
TAR383G0035 Trochodendron aralioides
TAR626G0188 Trochodendron aralioides
TAR626G1232 Trochodendron aralioides
TAR626G1339 Trochodendron aralioides
TAR629G0021 Trochodendron aralioides
THA.LOC104814774 Tarenaya hassleriana
Thecc.09G042400 Theobroma cacao
Thhalv10012570m.g Eutrema salsugineum
TPR.G1335 Trifolium pratense
TWI32G0786 Tripterygium wilfordii
unitig_22.g5110 Utricularia gibba
vmacro07087 Vaccinium macrocarpon
vmacro10453 Vaccinium macrocarpon
VMungo1309G1090 Vigna mungo
Zm00001eb284300 Zea mays
Zm00001eb350390 Zea mays

User provided reference genes

Program Settings