Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11460 Brassica napus
Actinidia01766 Actinidia chinensis
Actinidia15794 Actinidia chinensis
Actinidia22003 Actinidia chinensis
Actinidia40456 Actinidia chinensis
Ah.01g011210 Amaranthus hybridus
Ah.09g225870 Amaranthus hybridus
AL1G27520 Arabidopsis lyrata
Aqoxy7G02097 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea
AT1G15410 Arabidopsis thaliana
ATR1156G038 Amborella trichopoda
Atru.chr1.3072 Acer truncatum
Atru.chr7.1198 Acer truncatum
AUR62011090 Chenopodium quinoa
AUR62011108 Chenopodium quinoa
AUR62011555 Chenopodium quinoa
AUR62016374 Chenopodium quinoa
AUR62033477 Chenopodium quinoa
BcaC05g25483 Brassica carinata
BolC5t30094H Brassica oleracea
BraA06t24323Z Brassica rapa
C05p13580 Brassica napus
CAN.G407.106 Capsicum annuum
CANSAT11G2309 Cannabis sativa
CANSAT56G2529 Cannabis sativa
CARHR015950 Cardamine hirsuta
CARHR015960 Cardamine hirsuta
Carub.0001s1520 Capsella rubella
Ca_01082_v3 Cicer arietinum L.
Ca_21696_v3 Cicer arietinum L.
Cc04_g04060 Coffea canephora
Cc06_g08780 Coffea canephora
CDE02G2452 Ceratophyllum demersum
Cfa002007 Carpinus fangiana
Ciclev10008863m.g Citrus clementina
Ciclev10026043m.g Citrus clementina
CiPaw.01G244700 Carya illinoinensis
CiPaw.03G241800 Carya illinoinensis
ClCG06G010930 Citrullus lanatus
ClCG07G012790 Citrullus lanatus
ClCG09G013940 Citrullus lanatus
ClCG09G013950 Citrullus lanatus
COL.COLO4_05762 Corchorus olitorius
COL.COLO4_12905 Corchorus olitorius
Cpa.g.sc10.224 Carica papaya
Cpa.g.sc648.2 Carica papaya
CsaV3_4G001410 Cucumis sativus L.
CSS0012666 Camellia sinensis var. sinensis
CSS0016874 Camellia sinensis var. sinensis
DCAR_000573 Daucus carota
DCAR_014870 Daucus carota
DCAR_025486 Daucus carota
Dinv30573 Davidia involucrata
Dinv36546 Davidia involucrata
Dinv38099 Davidia involucrata
Dinv41531 Davidia involucrata
Duzib168G1107 Durio zibethinus
Duzib187G0771 Durio zibethinus
Duzib235G1097 Durio zibethinus
ECA232G2488 Erigeron canadensis
EL10Ac8g18617 Beta vulgaris
EL10Ac9g21937 Beta vulgaris
Eucgr.C01133 Eucalyptus grandis
Eucgr.J03052 Eucalyptus grandis
FAN02G3756 Fragaria x ananassa
FAN05G4627 Fragaria x ananassa
FAN14G0295 Fragaria x ananassa
FAN19G2000 Fragaria x ananassa
FAN23G0975 Fragaria x ananassa
FAN26G0686 Fragaria x ananassa
FAN26G3201 Fragaria x ananassa
FAN28G1194 Fragaria x ananassa
FvH4_1g03590 Fragaria vesca
FvH4_6g30270 Fragaria vesca
Glyma.05G008200 Glycine max
Glyma.13G363700 Glycine max
Glyma.15G010100 Glycine max
Glyma.17G116500 Glycine max
Gohir.A05G017900 Gossypium hirsutum
Gohir.A05G125200 Gossypium hirsutum
Gohir.A07G034800 Gossypium hirsutum
Gohir.A10G076166 Gossypium hirsutum
Gohir.D05G018800 Gossypium hirsutum
Gohir.D05G126200 Gossypium hirsutum
Gohir.D07G038800 Gossypium hirsutum
Gohir.D10G075401 Gossypium hirsutum
Gorai.001G040900 Gossypium raimondii
Gorai.009G019200 Gossypium raimondii
Gorai.009G130200 Gossypium raimondii
Gorai.011G081300 Gossypium raimondii
GSVIVG01015502001 Vitis vinifera
GSVIVG01017270001 Vitis vinifera
Haze_16515 Corylus avellana
Haze_25613 Corylus avellana
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla
Hund06577 Selenicereus undatus
Lalb_Chr22g0351001 Lupinus albus
Lj1g0003343 Lotus japonicus
Lj3g0004615 Lotus japonicus
Lj3g0025185 Lotus japonicus
Lj4g0000861 Lotus japonicus
Lj5A69T36 Lonicera japonica
Lj7A632T42 Lonicera japonica
Lsat_1_v5_gn_4_105880 Lactuca sativa
Manes.11G053200 Manihot esculenta
Manes.14G130600 Manihot esculenta
Mapoly0023s0100 Marchantia polymorpha
MBI04_g24205_MAGBIO Magnolia biondii
MD02G1035500 Malus domestica
MD17G1205400 Malus domestica
MD17G1205900 Malus domestica
Medtr2g103300 Medicago truncatula
Medtr4g114000 Medicago truncatula
MELO3C017899.2 Cucumis melo
MELO3C026644.2 Cucumis melo
Migut.D01056 Erythranthe guttata
MSTRG.11117 Avicennia marina
Nitab4.5_0002257g0010 Nicotiana tabacum
Nitab4.5_0006574g0020 Nicotiana tabacum
Nn2g11965 Nelumbo nucifera
Nn4g24990 Nelumbo nucifera
Nn8g39388 Nelumbo nucifera
Oeu041220.1 Olea europaea
Os01g0555200 Oryza sativa ssp. japonica
Peaxi162Scf00274g00858 Petunia axillaris
Peaxi162Scf00274g00859 Petunia axillaris
PGR031G2458 Punica granatum
PGR142G4293 Punica granatum
PGSC0003DMG402000630 Solanum tuberosum
Phvul.003G162800 Phaseolus vulgaris
Phvul.005G175301 Phaseolus vulgaris
Potri.003G061800 Populus trichocarpa
Prupe.3G081000 Prunus persica
Prupe.7G239700 Prunus persica
Psat0s806g0040 Pisum sativum
Psat4g040400 Pisum sativum
Psat5g301000 Pisum sativum
PSO170G0552 Papaver somniferum
QL02p087786 Quercus lobata
RcHm_v2.0_Chr2g0089121 Rosa chinensis
RcHm_v2.0_Chr2g0136511 Rosa chinensis
Rhsim01G0076600 Rhododendron simsii
Rhsim01G0076700 Rhododendron simsii
Rhsim03G0104000 Rhododendron simsii
Rhsim08G0216000 Rhododendron simsii
Sabra01G0139400 Salix brachista
Sabra03G0035900 Salix brachista
SalBow2G0819 Salvia bowleyana
SalBow2G2418 Salvia bowleyana
Sc18g0000700 Simmondsia chinensis
Sed0014623 Sechium edule
Sed0015734 Sechium edule
SEGI_16675 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02657 Striga asiatica
SMO271G0179 Selaginella moellendorffii
Solyc03g116460.4 Solanum lycopersicum
Sopen03g035350 Solanum pennellii
Sp1g13770 Schrenkiella parvula
TAR625G1371 Trochodendron aralioides
THA.LOC104813569 Tarenaya hassleriana
Thecc.06G071300 Theobroma cacao
Thecc.09G123100 Theobroma cacao
Thhalv10008186m.g Eutrema salsugineum
TPR.G10716 Trifolium pratense
TPR.G37189 Trifolium pratense
TWI34G1010 Tripterygium wilfordii
vmacro18966 Vaccinium macrocarpon
vmacro20597 Vaccinium macrocarpon
VMungo1080G0933 Vigna mungo
VMungo1215G2012 Vigna mungo
Zm00001eb342320 Zea mays

User provided reference genes

Program Settings