Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07700 Brassica napus
A04p18280 Brassica napus
Aa31LG2G20050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.755 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.756 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5826 Anthoceros agrestis
Actinidia18308 Actinidia chinensis
Actinidia38658 Actinidia chinensis
Ah.09g228630 Amaranthus hybridus
Ah.14g084270 Amaranthus hybridus
AL4G13950 Arabidopsis lyrata
AL7G21660 Arabidopsis lyrata
Aqoxy3G01561 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.43EHF4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5R3BA8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.69CB9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8RX8VY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9J99EW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7DWAT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H72Z00 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TB3RSS Arachis hypogaea
AT4G30480 Arabidopsis thaliana
ATR0763G121 Amborella trichopoda
ATR0763G144 Amborella trichopoda
Atru.chr7.424 Acer truncatum
AUR62028392 Chenopodium quinoa
AUR62039767 Chenopodium quinoa
BcaB06g27947 Brassica carinata
BcaC02g08518 Brassica carinata
BcaNung00558 Brassica carinata
BcaNung02985 Brassica carinata
BolC1t00839H Brassica oleracea
BolC4t26905H Brassica oleracea
BolC7t46253H Brassica oleracea
BraA01t00713Z Brassica rapa
BraA04t17439Z Brassica rapa
C01p08570 Brassica napus
C04p53510 Brassica napus
C07p57950 Brassica napus
CAN.G1190.24 Capsicum annuum
CAN.G346.10 Capsicum annuum
CAN.G363.9 Capsicum annuum
CARHR238370 Cardamine hirsuta
Carub.0007s1011 Capsella rubella
Ca_01517_v3 Cicer arietinum L.
Ca_01529_v3 Cicer arietinum L.
CBR_g12383 Chara braunii
Cc00_g22900 Coffea canephora
Cc00_g31770 Coffea canephora
Cc00_g34860 Coffea canephora
Cc06_g14380 Coffea canephora
CDE02G3171 Ceratophyllum demersum
CDE04G0594 Ceratophyllum demersum
Cfa012892 Carpinus fangiana
Cfa025583 Carpinus fangiana
Ciclev10009155m.g Citrus clementina
Ciclev10010190m.g Citrus clementina
CiPaw.10G166500 Carya illinoinensis
ClCG11G012680 Citrullus lanatus
COL.COLO4_10067 Corchorus olitorius
Cpa.g.sc37.157 Carica papaya
Cre02.g075100 Chlamydomonas reinhardtii
Cre03.g157950 Chlamydomonas reinhardtii
CsaV3_2G007790 Cucumis sativus L.
CSS0008901 Camellia sinensis var. sinensis
CSS0017975 Camellia sinensis var. sinensis
CSS0020287 Camellia sinensis var. sinensis
DCAR_014726 Daucus carota
Dinv41322 Davidia involucrata
Dinv42798 Davidia involucrata
Dinv43303 Davidia involucrata
Duzib150G0638 Durio zibethinus
Duzib168G2206 Durio zibethinus
Duzib187G0180 Durio zibethinus
Duzib187G0394 Durio zibethinus
EL10Ac8g18885 Beta vulgaris
Eucgr.C00110 Eucalyptus grandis
FAN11G0842 Fragaria x ananassa
FAN12G1528 Fragaria x ananassa
FAN12G3120 Fragaria x ananassa
FAN15G3651 Fragaria x ananassa
FAN16G0870 Fragaria x ananassa
FAN21G2611 Fragaria x ananassa
FAN25G1583 Fragaria x ananassa
FAN27G0955 Fragaria x ananassa
FvH4_3g34740 Fragaria vesca
FvH4_4g08690 Fragaria vesca
Glyma.08G356700 Glycine max
Glyma.13G354200 Glycine max
Glyma.15G020050 Glycine max
Glyma.18G174600 Glycine max
Gohir.A05G007100 Gossypium hirsutum
Gohir.A05G345884 Gossypium hirsutum
Gohir.D04G087100 Gossypium hirsutum
Gohir.D05G008000 Gossypium hirsutum
Gorai.009G008100 Gossypium raimondii
Gorai.012G097100 Gossypium raimondii
GSVIVG01023716001 Vitis vinifera
HanXRQChr03g0065991 Helianthus annuus
HanXRQChr09g0244711 Helianthus annuus
Haze_21259 Corylus avellana
Hma1.2p1_2732F.1_g327665 Hydrangea macrophylla
HPP92_017289 Vanilla planifolia
Lalb_Chr07g0193951 Lupinus albus
Lj4g0012280 Lotus japonicus
Lj9A725T27 Lonicera japonica
Lsat_1_v5_gn_5_88241 Lactuca sativa
Lsat_1_v5_gn_7_51160 Lactuca sativa
Manes.14G148900 Manihot esculenta
Mapoly0119s0026 Marchantia polymorpha
MBI14_g28321_MAGBIO Magnolia biondii
MCO12G083 Micromonas commoda
MD04G1009600 Malus domestica
MD16G1260600 Malus domestica
Medtr2g090135 Medicago truncatula
Medtr7g059150 Medicago truncatula
MELO3C004108.2 Cucumis melo
Migut.K00288 Erythranthe guttata
Nitab4.5_0002545g0010 Nicotiana tabacum
Nitab4.5_0003269g0040 Nicotiana tabacum
Nn2g14258 Nelumbo nucifera
Nn8g40208 Nelumbo nucifera
Oeu024902.1 Olea europaea
Os10g0486900 Oryza sativa ssp. japonica
Peaxi162Scf00038g00222 Petunia axillaris
Peaxi162Scf00038g00224 Petunia axillaris
PGR001G0003 Punica granatum
PGR044G0462 Punica granatum
PGSC0003DMG400011219 Solanum tuberosum
Phvul.008G125199 Phaseolus vulgaris
Potri.006G178900 Populus trichocarpa
Potri.018G100700 Populus trichocarpa
Pp3c8_13040 Physcomitrium patens
PRCOL_00003553 Prasinoderma coloniale
Prupe.1G099700 Prunus persica
Prupe.8G039000 Prunus persica
Psat3g143400 Pisum sativum
Psat5g270480 Pisum sativum
PSO063G3610 Papaver somniferum
PSO210G1136 Papaver somniferum
PSO782G1270 Papaver somniferum
PSO832G3676 Papaver somniferum
QL02p094618 Quercus lobata
RcHm_v2.0_Chr4g0405181 Rosa chinensis
Rhsim03G0261300 Rhododendron simsii
Rhsim03G0261400 Rhododendron simsii
Sabra06G0135900 Salix brachista
SalBow6G3589 Salvia bowleyana
Sc18g0003210 Simmondsia chinensis
Sc18g0003220 Simmondsia chinensis
Sed0007467 Sechium edule
Sed0010600 Sechium edule
SEGI_14856 Sequoiadendron giganteum
SEGI_31472 Sequoiadendron giganteum
SGA_v2.0_scaffold293G47418 Striga asiatica
SMO361G0476 Selaginella moellendorffii
Solyc07g006180.3 Solanum lycopersicum
Sopen07g002290 Solanum pennellii
Sp4g02820 Schrenkiella parvula
Sp7g28360 Schrenkiella parvula
TAR625G1091 Trochodendron aralioides
TAR636G0475 Trochodendron aralioides
THA.LOC104803531 Tarenaya hassleriana
Thecc.09G157800 Theobroma cacao
Thhalv10000290m.g Eutrema salsugineum
Thhalv10025952m.g Eutrema salsugineum
TPR.G23301 Trifolium pratense
TPR.G35554 Trifolium pratense
TPR.G40045 Trifolium pratense
TWI34G0749 Tripterygium wilfordii
TWI63G1262 Tripterygium wilfordii
unitig_62.g23482 Utricularia gibba
vmacro06046 Vaccinium macrocarpon
VMungo1127G1680 Vigna mungo
VMungo1383G2940 Vigna mungo
Zm00001eb060560 Zea mays
Zm00001eb365370 Zea mays

User provided reference genes

Program Settings