Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p30010 Brassica napus
Aa31LG3G5080 Aethionema arabicum
Aa31sc52G210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.394 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.90 Anthoceros agrestis
Actinidia21636 Actinidia chinensis
Actinidia21868 Actinidia chinensis
Actinidia38793 Actinidia chinensis
Ah.12g059190 Amaranthus hybridus
AL6G16440 Arabidopsis lyrata
Aqoxy1G00659 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.07MWYB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T05T6P Arachis hypogaea
AT5G06360 Arabidopsis thaliana
ATR0772G207 Amborella trichopoda
Atru.chr12.911 Acer truncatum
Atru.chr8.1362 Acer truncatum
AUR62030745 Chenopodium quinoa
AUR62036383 Chenopodium quinoa
BcaB05g21673 Brassica carinata
BcaC01g01015 Brassica carinata
BcaC03g13169 Brassica carinata
BcaC05g26689 Brassica carinata
BcaC06g32370 Brassica carinata
BcaNung06320 Brassica carinata
BolC2t06233H Brassica oleracea
BolC9t59788H Brassica oleracea
BraA02t04878Z Brassica rapa
BraA10t45041Z Brassica rapa
C02p02670 Brassica napus
C09p70420 Brassica napus
CAN.G1001.28 Capsicum annuum
CAN.G710.48 Capsicum annuum
CANSAT64G2459 Cannabis sativa
CARHR207110 Cardamine hirsuta
Carub.0006s0525 Capsella rubella
Ca_11700_v3 Cicer arietinum L.
Ca_16636_v3 Cicer arietinum L.
CBR_g12036 Chara braunii
Cc04_g00390 Coffea canephora
CDE10G0110 Ceratophyllum demersum
CDE10G0220 Ceratophyllum demersum
CDE10G1025 Ceratophyllum demersum
Cfa010504 Carpinus fangiana
Cfa024104 Carpinus fangiana
Ciclev10012509m.g Citrus clementina
CiPaw.09G020900 Carya illinoinensis
CiPaw.10G017400 Carya illinoinensis
ClCG01G015010 Citrullus lanatus
COL.COLO4_29575 Corchorus olitorius
Cpa.g.sc104.32 Carica papaya
Cre12.g507300 Chlamydomonas reinhardtii
CsaV3_6G041100 Cucumis sativus L.
CSS0000599 Camellia sinensis var. sinensis
DCAR_016668 Daucus carota
DCAR_017903 Daucus carota
Dinv20358 Davidia involucrata
Dinv37798 Davidia involucrata
Duzib093G1950 Durio zibethinus
Duzib106G1686 Durio zibethinus
ECA233G4676 Erigeron canadensis
EL10Ac3g06422 Beta vulgaris
EL10Ac5g12966 Beta vulgaris
Eucgr.K02620 Eucalyptus grandis
FAN19G1372 Fragaria x ananassa
FAN19G3070 Fragaria x ananassa
FAN23G0735 Fragaria x ananassa
FAN23G1436 Fragaria x ananassa
FAN26G0481 Fragaria x ananassa
FAN28G2380 Fragaria x ananassa
FvH4_1g24730 Fragaria vesca
FvH4_1g24810 Fragaria vesca
Glyma.02G196900 Glycine max
Glyma.10G002300 Glycine max
Glyma.10G081400 Glycine max
Gohir.A01G201400 Gossypium hirsutum
Gohir.A09G134200 Gossypium hirsutum
Gohir.D01G191300 Gossypium hirsutum
Gohir.D09G130700 Gossypium hirsutum
Gorai.002G235200 Gossypium raimondii
Gorai.006G149400 Gossypium raimondii
GSVIVG01011153001 Vitis vinifera
HanXRQChr03g0072971 Helianthus annuus
HanXRQChr09g0277391 Helianthus annuus
HanXRQChr17g0533251 Helianthus annuus
Haze_03432 Corylus avellana
Haze_20185 Corylus avellana
Haze_27191 Corylus avellana
Hma1.2p1_1104F.1_g257380 Hydrangea macrophylla
HPP92_002146 Vanilla planifolia
Hund02215 Selenicereus undatus
Hund10875 Selenicereus undatus
Lalb_Chr02g0144091 Lupinus albus
Lalb_Chr11g0067891 Lupinus albus
Lj1g0010263 Lotus japonicus
Lj2g0010046 Lotus japonicus
Lj6A21G25 Lonicera japonica
Lj6A3G40 Lonicera japonica
Lj9C540G13 Lonicera japonica
Lsat_1_v5_gn_4_88760 Lactuca sativa
Lsat_1_v5_gn_6_32361 Lactuca sativa
Lsat_1_v5_gn_6_65181 Lactuca sativa
Lsat_1_v5_gn_8_162181 Lactuca sativa
Manes.01G025400 Manihot esculenta
Manes.08G033500 Manihot esculenta
Mapoly0020s0123 Marchantia polymorpha
MCO03G138 Micromonas commoda
MD05G1235300 Malus domestica
MD10G1211300 Malus domestica
Medtr0508s0010 Medicago truncatula
Medtr3g088865 Medicago truncatula
MELO3C024586.2 Cucumis melo
Migut.I01176 Erythranthe guttata
MSTRG.10894 Avicennia marina
Nitab4.5_0003291g0080 Nicotiana tabacum
Nitab4.5_0008073g0030 Nicotiana tabacum
Nn2g14305 Nelumbo nucifera
Oeu039454.1 Olea europaea
Oeu049654.1 Olea europaea
Os07g0673100 Oryza sativa ssp. japonica
Peaxi162Scf00286g00330 Petunia axillaris
Peaxi162Scf01149g00220 Petunia axillaris
PGR004G2105 Punica granatum
PGR142G4032 Punica granatum
PGSC0003DMG400021625 Solanum tuberosum
PGSC0003DMG400029099 Solanum tuberosum
Phvul.007G268100 Phaseolus vulgaris
Phvul.010G103000 Phaseolus vulgaris
Potri.006G203400 Populus trichocarpa
Potri.016G070400 Populus trichocarpa
Pp3c7_2280 Physcomitrium patens
PRCOL_00000915 Prasinoderma coloniale
Prupe.4G241300 Prunus persica
Psat6g114680 Pisum sativum
PSO339G3654 Papaver somniferum
PSO384G4082 Papaver somniferum
QL07p036748 Quercus lobata
RcHm_v2.0_Chr2g0122251 Rosa chinensis
RcHm_v2.0_Chr4g0409741 Rosa chinensis
RcHm_v2.0_Chr7g0216551 Rosa chinensis
RcHm_v2.0_Chr7g0216581 Rosa chinensis
RcHm_v2.0_Chr7g0216591 Rosa chinensis
Rhsim05G0206200 Rhododendron simsii
Rhsim08G0248000 Rhododendron simsii
Sabra06G0156600 Salix brachista
Sabra16G0070600 Salix brachista
Sabra16G0072800 Salix brachista
SalBow6G5742 Salvia bowleyana
Sc14g0006610 Simmondsia chinensis
Sed0023950 Sechium edule
Sed0024685 Sechium edule
SEGI_04875 Sequoiadendron giganteum
SGA_v2.0_scaffold71G24009 Striga asiatica
SHI12410 Sapria himalayana
SHI12413 Sapria himalayana
SHI32256 Sapria himalayana
SMO367G0573 Selaginella moellendorffii
Sopen09g036280 Solanum pennellii
Sp6g36490 Schrenkiella parvula
TAR623G0676 Trochodendron aralioides
TAR633G0404 Trochodendron aralioides
THA.LOC104809953 Tarenaya hassleriana
THA.LOC104826802 Tarenaya hassleriana
Thecc.05G104300 Theobroma cacao
Thhalv10014439m.g Eutrema salsugineum
TPR.G2813 Trifolium pratense
TPR.G5876 Trifolium pratense
TPR.G6300 Trifolium pratense
TWI74G1172 Tripterygium wilfordii
TWI77G0554 Tripterygium wilfordii
unitig_32.g11085 Utricularia gibba
unitig_748.g7832 Utricularia gibba
vmacro18760 Vaccinium macrocarpon
VMungo0331G0074 Vigna mungo
VMungo0720G1310 Vigna mungo
Zm00001eb111290 Zea mays
Zm00001eb330440 Zea mays

User provided reference genes

Program Settings