Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01160 Brassica napus
A04p34110 Brassica napus
A09p53400 Brassica napus
Aa31LG10G15570 Aethionema arabicum
Aa31LG1G27300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2628 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.958 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3805 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1957 Anthoceros agrestis
Actinidia10022 Actinidia chinensis
Ah.05g180690 Amaranthus hybridus
AL4G45080 Arabidopsis lyrata
AL5G43590 Arabidopsis lyrata
Aqoxy5G04009 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2H0UDK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5YAPI Arachis hypogaea
AT2G45870 Arabidopsis thaliana
AT3G61320 Arabidopsis thaliana
ATR0680G085 Amborella trichopoda
Atru.chr5.464 Acer truncatum
AUR62004344 Chenopodium quinoa
AUR62022550 Chenopodium quinoa
BcaB02g11262 Brassica carinata
BcaC02g07065 Brassica carinata
BcaC02g10219 Brassica carinata
BcaC07g40631 Brassica carinata
BcaC09g52244 Brassica carinata
BolC4t24688H Brassica oleracea
BolC4t28689H Brassica oleracea
BolC8t51203H Brassica oleracea
BraA04t15833Z Brassica rapa
BraA04t18872Z Brassica rapa
BraA09t40766Z Brassica rapa
C04p31390 Brassica napus
C04p71910 Brassica napus
C05p09980 Brassica napus
C08p36210 Brassica napus
CAN.G399.13 Capsicum annuum
CANSAT56G2580 Cannabis sativa
CARHR141140 Cardamine hirsuta
CARHR171630 Cardamine hirsuta
Carub.0004s2857 Capsella rubella
Carub.0005s2799 Capsella rubella
Ca_23643_v3 Cicer arietinum L.
CBR_g38187 Chara braunii
CBR_g772 Chara braunii
Cc02_g37870 Coffea canephora
CDE09G0298 Ceratophyllum demersum
Cfa003938 Carpinus fangiana
Ciclev10020374m.g Citrus clementina
CiPaw.01G059900 Carya illinoinensis
CiPaw.02G030000 Carya illinoinensis
COL.COLO4_12700 Corchorus olitorius
Cpa.g.sc18.243 Carica papaya
Cre01.g038100 Chlamydomonas reinhardtii
Cre03.g199600 Chlamydomonas reinhardtii
Cre03.g199652 Chlamydomonas reinhardtii
Cre06.g261750 Chlamydomonas reinhardtii
Cre06.g277650 Chlamydomonas reinhardtii
Cre07.g355300 Chlamydomonas reinhardtii
Cre11.g474700 Chlamydomonas reinhardtii
Cre16.g662600 Chlamydomonas reinhardtii
Cre16.g663400 Chlamydomonas reinhardtii
Cre16.g663450 Chlamydomonas reinhardtii
CSS0041241 Camellia sinensis var. sinensis
CSS0049620 Camellia sinensis var. sinensis
DCAR_015969 Daucus carota
Dinv32469 Davidia involucrata
Duzib133G0298 Durio zibethinus
Duzib138G1448 Durio zibethinus
ECA234G1137 Erigeron canadensis
ECA240G2096 Erigeron canadensis
EL10Ac1g00428 Beta vulgaris
Eucgr.E00157 Eucalyptus grandis
FAN01G0250 Fragaria x ananassa
FAN03G2475 Fragaria x ananassa
FAN06G2309 Fragaria x ananassa
FAN06G3470 Fragaria x ananassa
FAN10G0144 Fragaria x ananassa
FAN10G2852 Fragaria x ananassa
FAN10G4090 Fragaria x ananassa
FvH4_7g14170 Fragaria vesca
Glyma.03G010800 Glycine max
Glyma.07G071900 Glycine max
Gohir.A11G088200 Gossypium hirsutum
Gohir.D11G092500 Gossypium hirsutum
Gorai.007G098800 Gossypium raimondii
GSVIVG01026895001 Vitis vinifera
HanXRQChr13g0426521 Helianthus annuus
HanXRQChr16g0522811 Helianthus annuus
Haze_15488 Corylus avellana
HPP92_006558 Vanilla planifolia
HPP92_011355 Vanilla planifolia
HPP92_011356 Vanilla planifolia
Hund27285 Selenicereus undatus
Lalb_Chr03g0038211 Lupinus albus
Lalb_Chr04g0256871 Lupinus albus
Lj3g0006137 Lotus japonicus
Lj9A582T85 Lonicera japonica
Lsat_1_v5_gn_3_137060 Lactuca sativa
Lsat_1_v5_gn_4_36221 Lactuca sativa
Manes.05G036000 Manihot esculenta
Mapoly0009s0131 Marchantia polymorpha
Mapoly0071s0037 Marchantia polymorpha
MBI18_g25515_MAGBIO Magnolia biondii
MCO01G007 Micromonas commoda
MCO01G232 Micromonas commoda
MCO09G357 Micromonas commoda
MD01G1057600 Malus domestica
MD01G1202300 Malus domestica
MD07G1139000 Malus domestica
Medtr8g031000 Medicago truncatula
Migut.N01440 Erythranthe guttata
MSTRG.4859 Avicennia marina
Nitab4.5_0001702g0090 Nicotiana tabacum
Nitab4.5_0008050g0040 Nicotiana tabacum
Nn1g01512 Nelumbo nucifera
Oeu020562.1 Olea europaea
Oeu020563.1 Olea europaea
Oeu020564.1 Olea europaea
Os03g0106000 Oryza sativa ssp. japonica
Peaxi162Scf00191g01422 Petunia axillaris
PGR042G2566 Punica granatum
PGSC0003DMG400021644 Solanum tuberosum
Phvul.010G097300 Phaseolus vulgaris
Potri.014G082900 Populus trichocarpa
Pp3c11_6680 Physcomitrium patens
Pp3c11_9440 Physcomitrium patens
Pp3c14_6660 Physcomitrium patens
Pp3c1_34560 Physcomitrium patens
Pp3c1_34600 Physcomitrium patens
Pp3c1_3670 Physcomitrium patens
Pp3c20_3390 Physcomitrium patens
Pp3c2_13700 Physcomitrium patens
Pp3c3_14710 Physcomitrium patens
Pp3c3_22870 Physcomitrium patens
Pp3c4_15850 Physcomitrium patens
Pp3c6_17920 Physcomitrium patens
Pp3c6_24250 Physcomitrium patens
PRCOL_00003097 Prasinoderma coloniale
PRCOL_00003548 Prasinoderma coloniale
PRCOL_00004040 Prasinoderma coloniale
PRCOL_00004398 Prasinoderma coloniale
PRCOL_00005764 Prasinoderma coloniale
PRCOL_00006054 Prasinoderma coloniale
Prupe.2G168100 Prunus persica
Psat4g154400 Pisum sativum
PSO478G4509 Papaver somniferum
QL08p049021 Quercus lobata
RcHm_v2.0_Chr1g0355071 Rosa chinensis
Rhsim07G0016400 Rhododendron simsii
Sabra14G0060100 Salix brachista
SalBow5G2271 Salvia bowleyana
Sc23g0002980 Simmondsia chinensis
SEGI_01331 Sequoiadendron giganteum
SEGI_25793 Sequoiadendron giganteum
SEGI_34263 Sequoiadendron giganteum
SEGI_35716 Sequoiadendron giganteum
SGA_v2.0_scaffold43G16422 Striga asiatica
SMO364G0338 Selaginella moellendorffii
Solyc05g049900.3 Solanum lycopersicum
Sopen05g028240 Solanum pennellii
Sp4g27940 Schrenkiella parvula
Sp5g02060 Schrenkiella parvula
TAR375G0209 Trochodendron aralioides
TAR629G1832 Trochodendron aralioides
THA.LOC104817290 Tarenaya hassleriana
Thecc.01G360500 Theobroma cacao
Thhalv10001467m.g Eutrema salsugineum
Thhalv10006010m.g Eutrema salsugineum
TPR.G15979 Trifolium pratense
TWI23G1005 Tripterygium wilfordii
TWI59G0555 Tripterygium wilfordii
unitig_8.g3394 Utricularia gibba
vmacro13277 Vaccinium macrocarpon
VMungo0331G0006 Vigna mungo
Zm00001eb000510 Zea mays

User provided reference genes

Program Settings