Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p05220 Brassica napus
Aa31LG8G13250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3882 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4869 Anthoceros agrestis
Actinidia17870 Actinidia chinensis
Actinidia17873 Actinidia chinensis
Actinidia27960 Actinidia chinensis
Ah.06g191740 Amaranthus hybridus
AL3G47290 Arabidopsis lyrata
Aqoxy3G03577 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.40XXPT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L91QGB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5SG57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SW2MKB Arachis hypogaea
AT2G15560 Arabidopsis thaliana
ATR0064G007 Amborella trichopoda
Atru.chr5.2682 Acer truncatum
AUR62004802 Chenopodium quinoa
AUR62039036 Chenopodium quinoa
BcaB03g16302 Brassica carinata
BcaC06g36064 Brassica carinata
BolC7t41246H Brassica oleracea
BraA07t28314Z Brassica rapa
C07p08330 Brassica napus
CAN.G1041.40 Capsicum annuum
CANSAT25G3720 Cannabis sativa
CARHR105830 Cardamine hirsuta
CARHR110470 Cardamine hirsuta
Carub.0003s2933 Capsella rubella
Ca_18700_v3 Cicer arietinum L.
CBR_g45845 Chara braunii
Cc02_g18900 Coffea canephora
CDE04G3628 Ceratophyllum demersum
CDE07G0949 Ceratophyllum demersum
Cfa004526 Carpinus fangiana
Cfa004527 Carpinus fangiana
Ciclev10028188m.g Citrus clementina
CiPaw.05G006900 Carya illinoinensis
CiPaw.06G172100 Carya illinoinensis
ClCG05G009950 Citrullus lanatus
COL.COLO4_32641 Corchorus olitorius
Cpa.g.c33779.1 Carica papaya
CsaV3_3G018620 Cucumis sativus L.
CSS0010767 Camellia sinensis var. sinensis
CSS0013148 Camellia sinensis var. sinensis
CSS0016310 Camellia sinensis var. sinensis
CSS0020920 Camellia sinensis var. sinensis
CSS0026129 Camellia sinensis var. sinensis
CSS0041791 Camellia sinensis var. sinensis
CSS0044494 Camellia sinensis var. sinensis
DCAR_029071 Daucus carota
Dinv15721 Davidia involucrata
Duzib132G0860 Durio zibethinus
Duzib248G1240 Durio zibethinus
ECA234G2042 Erigeron canadensis
ECA234G4231 Erigeron canadensis
ECA234G4616 Erigeron canadensis
ECA236G2111 Erigeron canadensis
EL10Ac4g08963 Beta vulgaris
Eucgr.I01138 Eucalyptus grandis
FAN15G2327 Fragaria x ananassa
FAN20G2678 Fragaria x ananassa
FAN24G1823 Fragaria x ananassa
FAN27G3276 Fragaria x ananassa
FvH4_2g05850 Fragaria vesca
Glyma.02G102500 Glycine max
Glyma.07G213800 Glycine max
Gohir.A04G120500 Gossypium hirsutum
Gohir.A13G041100 Gossypium hirsutum
Gohir.D04G162000 Gossypium hirsutum
Gohir.D13G039800 Gossypium hirsutum
Gorai.012G150000 Gossypium raimondii
Gorai.013G044700 Gossypium raimondii
GSVIVG01031726001 Vitis vinifera
HanXRQChr01g0012371 Helianthus annuus
HanXRQChr10g0301841 Helianthus annuus
HanXRQChr10g0301851 Helianthus annuus
Haze_10085 Corylus avellana
Hma1.2p1_0370F.1_g137710 Hydrangea macrophylla
Hma1.2p1_0474F.1_g160500 Hydrangea macrophylla
Hma1.2p1_0474F.1_g160520 Hydrangea macrophylla
HPP92_020439 Vanilla planifolia
Hund06890 Selenicereus undatus
Hund22179 Selenicereus undatus
Lalb_Chr05g0219241 Lupinus albus
Lalb_Chr16g0384791 Lupinus albus
Lj4g0000678 Lotus japonicus
Lj5A210G92 Lonicera japonica
Lsat_1_v5_gn_5_112341 Lactuca sativa
Lsat_1_v5_gn_7_86880 Lactuca sativa
Manes.10G079100 Manihot esculenta
Mapoly0060s0064 Marchantia polymorpha
MBI16_g30409_MAGBIO Magnolia biondii
MD05G1082600 Malus domestica
Medtr4g085820 Medicago truncatula
MELO3C019504.2 Cucumis melo
Migut.B00358 Erythranthe guttata
MSTRG.16733 Avicennia marina
MSTRG.27730 Avicennia marina
MSTRG.5360 Avicennia marina
Nitab4.5_0001428g0110 Nicotiana tabacum
Nitab4.5_0003080g0070 Nicotiana tabacum
Nn3g17394 Nelumbo nucifera
Nn4g23369 Nelumbo nucifera
Oeu001766.1 Olea europaea
Oeu001767.1 Olea europaea
Oeu001774.1 Olea europaea
Oeu001778.1 Olea europaea
Oeu001779.1 Olea europaea
Oeu001781.1 Olea europaea
Oeu006634.1 Olea europaea
Oeu006949.1 Olea europaea
Oeu007293.1 Olea europaea
Oeu007295.1 Olea europaea
Oeu013718.1 Olea europaea
Oeu028947.1 Olea europaea
Oeu044308.1 Olea europaea
Oeu051141.1 Olea europaea
Os08g0230500 Oryza sativa ssp. japonica
Peaxi162Scf00003g00236 Petunia axillaris
Peaxi162Scf00016g00198 Petunia axillaris
PGR142G0103 Punica granatum
PGSC0003DMG400025886 Solanum tuberosum
PGSC0003DMG401006212 Solanum tuberosum
Phvul.003G027700 Phaseolus vulgaris
Potri.004G140400 Populus trichocarpa
Potri.009G100600 Populus trichocarpa
Pp3c13_3950 Physcomitrium patens
Pp3c16_22960 Physcomitrium patens
Pp3c1_4990 Physcomitrium patens
Pp3c25_11880 Physcomitrium patens
Pp3c3_5910 Physcomitrium patens
Prupe.8G127000 Prunus persica
Psat7g122880 Pisum sativum
PSO017G6254 Papaver somniferum
PSO063G0718 Papaver somniferum
PSO170G2775 Papaver somniferum
PSO409G0037 Papaver somniferum
PSO676G0016 Papaver somniferum
QL11p035705 Quercus lobata
RcHm_v2.0_Chr6g0257731 Rosa chinensis
Rhsim05G0055500 Rhododendron simsii
Rhsim05G0086200 Rhododendron simsii
RhsimUnG0045500 Rhododendron simsii
Sabra04G0092300 Salix brachista
SalBow3G1970 Salvia bowleyana
SalBow6G5413 Salvia bowleyana
Sc10g0006490 Simmondsia chinensis
Sed0007922 Sechium edule
Sed0015817 Sechium edule
SEGI_00211 Sequoiadendron giganteum
SEGI_18127 Sequoiadendron giganteum
SEGI_32113 Sequoiadendron giganteum
SGA_v2.0_scaffold922G53727 Striga asiatica
SHI05294 Sapria himalayana
SMO364G0948 Selaginella moellendorffii
Solyc01g108010.3 Solanum lycopersicum
Solyc10g050190.3 Solanum lycopersicum
Sopen01g050210 Solanum pennellii
Sopen10g021340 Solanum pennellii
Sp3g28790 Schrenkiella parvula
TAR371G1126 Trochodendron aralioides
TAR374G0546 Trochodendron aralioides
TAR622G1431 Trochodendron aralioides
THA.LOC104804376 Tarenaya hassleriana
THA.LOC104819571 Tarenaya hassleriana
Thecc.02G102200 Theobroma cacao
Thhalv10022670m.g Eutrema salsugineum
TPR.G12531 Trifolium pratense
TPR.G12726 Trifolium pratense
TWI31G0582 Tripterygium wilfordii
unitig_0.g863 Utricularia gibba
unitig_26.g9148 Utricularia gibba
unitig_61.g26004 Utricularia gibba
unitig_749.g14206 Utricularia gibba
vmacro19507 Vaccinium macrocarpon
Zm00001eb411230 Zea mays

User provided reference genes

Program Settings