Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p10690 Brassica napus
A08p10790 Brassica napus
A09p35130 Brassica napus
Aa31LG2G15040 Aethionema arabicum
Aa31LG9G16190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1916 Anthoceros agrestis
Actinidia22422 Actinidia chinensis
Ah.08g210510 Amaranthus hybridus
AL1G45460 Arabidopsis lyrata
AL4G31040 Arabidopsis lyrata
Aqoxy3G04338 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QMDN7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YAS9I4 Arachis hypogaea
AT1G31070 Arabidopsis thaliana
AT2G35020 Arabidopsis thaliana
ATR0763G183 Amborella trichopoda
Atru.chr10.419 Acer truncatum
Atru.ctg1436.5 Acer truncatum
AUR62006193 Chenopodium quinoa
AUR62037029 Chenopodium quinoa
BcaB02g09488 Brassica carinata
BcaB04g18183 Brassica carinata
BcaB07g32771 Brassica carinata
BcaC02g11582 Brassica carinata
BcaC05g27140 Brassica carinata
BcaC07g37780 Brassica carinata
BolC4t22968H Brassica oleracea
BolC5t31766H Brassica oleracea
BolC8t48168H Brassica oleracea
BraA05t20009Z Brassica rapa
BraA08t33076Z Brassica rapa
BraA09t39043Z Brassica rapa
C04p13780 Brassica napus
C05p30260 Brassica napus
CAN.G149.2 Capsicum annuum
CANSAT35G1049 Cannabis sativa
CANSAT64G2986 Cannabis sativa
CARHR030580 Cardamine hirsuta
CARHR125140 Cardamine hirsuta
CARHR129180 Cardamine hirsuta
Carub.0001s2946 Capsella rubella
Carub.0004s1671 Capsella rubella
Ca_18249_v3 Cicer arietinum L.
CBR_g45707 Chara braunii
Cc00_g22880 Coffea canephora
CDE12G0287 Ceratophyllum demersum
Cfa000676 Carpinus fangiana
Cfa023099 Carpinus fangiana
Ciclev10014997m.g Citrus clementina
CiPaw.09G074500 Carya illinoinensis
ClCG01G025630 Citrullus lanatus
COL.COLO4_17634 Corchorus olitorius
Cpa.g.sc30.136 Carica papaya
Cre07.g345300 Chlamydomonas reinhardtii
Cre16.g696000 Chlamydomonas reinhardtii
CsaV3_6G052860 Cucumis sativus L.
CSS0033159 Camellia sinensis var. sinensis
DCAR_003771 Daucus carota
Dinv10533 Davidia involucrata
Dinv29312 Davidia involucrata
Dinv29313 Davidia involucrata
Duzib132G1257 Durio zibethinus
Duzib248G0257 Durio zibethinus
ECA238G4411 Erigeron canadensis
EL10Ac7g16905 Beta vulgaris
Eucgr.E04308 Eucalyptus grandis
FAN16G1436 Fragaria x ananassa
FAN21G3157 Fragaria x ananassa
FAN25G3197 Fragaria x ananassa
FvH4_3g12660 Fragaria vesca
Glyma.05G132100 Glycine max
Glyma.08G086700 Glycine max
Gohir.A03G217900 Gossypium hirsutum
Gohir.A03G217950 Gossypium hirsutum
Gohir.A12G048400 Gossypium hirsutum
Gohir.D02G239900 Gossypium hirsutum
Gohir.D12G047200 Gossypium hirsutum
Gorai.005G268300 Gossypium raimondii
Gorai.008G049800 Gossypium raimondii
GSVIVG01006086001 Vitis vinifera
GSVIVG01012124001 Vitis vinifera
HanXRQChr02g0052471 Helianthus annuus
HanXRQChr08g0234841 Helianthus annuus
HanXRQChr11g0327571 Helianthus annuus
HanXRQChr14g0440241 Helianthus annuus
HanXRQChr15g0483471 Helianthus annuus
HanXRQChr15g0483481 Helianthus annuus
Haze_06142 Corylus avellana
Haze_26176 Corylus avellana
Hma1.2p1_0510F.1_g168820 Hydrangea macrophylla
HPP92_016424 Vanilla planifolia
HPP92_026365 Vanilla planifolia
HPP92_026366 Vanilla planifolia
Hund12931 Selenicereus undatus
Lalb_Chr07g0188401 Lupinus albus
Lj1C1147G9 Lonicera japonica
Lj2A344G38 Lonicera japonica
Lj4g0018518 Lotus japonicus
Lj9A712T61 Lonicera japonica
Lsat_1_v5_gn_2_61101 Lactuca sativa
Manes.03G074000 Manihot esculenta
Mapoly0089s0037 Marchantia polymorpha
MBI18_g31367_MAGBIO Magnolia biondii
MCO02G083 Micromonas commoda
MD05G1248900 Malus domestica
MD10G1229400 Malus domestica
Medtr4g094668 Medicago truncatula
MELO3C007022.2 Cucumis melo
Migut.M01998 Erythranthe guttata
MSTRG.7601 Avicennia marina
Nitab4.5_0000443g0090 Nicotiana tabacum
Nitab4.5_0006246g0020 Nicotiana tabacum
Nn7g38278 Nelumbo nucifera
Oeu058944.1 Olea europaea
Os08g0206900 Oryza sativa ssp. japonica
Peaxi162Scf00199g00517 Petunia axillaris
Peaxi162Scf00298g00083 Petunia axillaris
PGR004G1431 Punica granatum
PGR042G2298 Punica granatum
PGSC0003DMG400010448 Solanum tuberosum
Phvul.002G190700 Phaseolus vulgaris
Potri.001G159700 Populus trichocarpa
Potri.003G074700 Populus trichocarpa
Pp3c4_17200 Physcomitrium patens
PRCOL_00005739 Prasinoderma coloniale
Prupe.4G115400 Prunus persica
Psat7g088440 Pisum sativum
PSO541G2426 Papaver somniferum
PSO675G6709 Papaver somniferum
QL11p013429 Quercus lobata
QL11p013470 Quercus lobata
RcHm_v2.0_Chr5g0020631 Rosa chinensis
Rhsim13G0129600 Rhododendron simsii
Sabra01G0132300 Salix brachista
Sabra03G0045400 Salix brachista
SalBow8G3138 Salvia bowleyana
Sc24g0002980 Simmondsia chinensis
Sed0013384 Sechium edule
SEGI_01058 Sequoiadendron giganteum
SEGI_21324 Sequoiadendron giganteum
SEGI_28054 Sequoiadendron giganteum
SEGI_30940 Sequoiadendron giganteum
SGA_v2.0_scaffold175G39352 Striga asiatica
SGA_v2.0_scaffold298G47698 Striga asiatica
SGA_v2.0_scaffold638G53308 Striga asiatica
SGA_v2.0_scaffold77G25372 Striga asiatica
SHI20747 Sapria himalayana
SMO111G0091 Selaginella moellendorffii
SMO351G0243 Selaginella moellendorffii
Solyc02g068530.4 Solanum lycopersicum
Sopen02g017670 Solanum pennellii
Sp1g26910 Schrenkiella parvula
Sp4g17300 Schrenkiella parvula
SpUn0157_0030 Schrenkiella parvula
TAR624G0604 Trochodendron aralioides
TAR625G0767 Trochodendron aralioides
TAR626G0108 Trochodendron aralioides
TAR626G1704 Trochodendron aralioides
TAR628G0742 Trochodendron aralioides
THA.LOC104798559 Tarenaya hassleriana
THA.LOC104814353 Tarenaya hassleriana
Thecc.02G005900 Theobroma cacao
Thhalv10007394m.g Eutrema salsugineum
Thhalv10016553m.g Eutrema salsugineum
TPR.G2935 Trifolium pratense
TWI15G0787 Tripterygium wilfordii
TWI38G0647 Tripterygium wilfordii
unitig_748.g7494 Utricularia gibba
VMungo0251G3294 Vigna mungo
VMungo1309G2465 Vigna mungo
Zm00001eb010380 Zea mays
Zm00001eb018150 Zea mays
Zm00001eb070940 Zea mays
Zm00001eb085490 Zea mays
Zm00001eb188860 Zea mays
Zm00001eb413790 Zea mays
Zm00001eb430780 Zea mays

User provided reference genes

Program Settings