Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22020 Brassica napus
A07p14630 Brassica napus
A07p27700 Brassica napus
A07p43360 Brassica napus
A07p43420 Brassica napus
A09p42540 Brassica napus
Aa31LG4G8160 Aethionema arabicum
Aa31LG7G6170 Aethionema arabicum
Actinidia27197 Actinidia chinensis
Actinidia30763 Actinidia chinensis
Ah.05g170190 Amaranthus hybridus
AL1G35680 Arabidopsis lyrata
AL2G38420 Arabidopsis lyrata
Aqoxy5G01999 Aquilegia oxysepala
Aqoxy6G00599 Aquilegia oxysepala
AT1G22230 Arabidopsis thaliana
AT1G78110 Arabidopsis thaliana
ATR0122G028 Amborella trichopoda
ATR0153G003 Amborella trichopoda
ATR0153G027 Amborella trichopoda
ATR0564G364 Amborella trichopoda
Atru.chr13.1213 Acer truncatum
AUR62027732 Chenopodium quinoa
BcaB02g07147 Brassica carinata
BcaB03g11901 Brassica carinata
BcaB03g11902 Brassica carinata
BcaB03g15981 Brassica carinata
BcaB05g25102 Brassica carinata
BcaB07g32243 Brassica carinata
BcaB07g32245 Brassica carinata
BcaC03g15795 Brassica carinata
BcaC05g26150 Brassica carinata
BcaC06g34942 Brassica carinata
BcaC07g38451 Brassica carinata
BcaC08g45438 Brassica carinata
BcaC08g47387 Brassica carinata
BolC2t09553H Brassica oleracea
BolC5t30833H Brassica oleracea
BolC6t38232H Brassica oleracea
BolC6t40231H Brassica oleracea
BolC7t42678H Brassica oleracea
BolC8t49783H Brassica oleracea
BraA02t07205Z Brassica rapa
BraA07t29207Z Brassica rapa
BraA07t30411Z Brassica rapa
BraA07t31856Z Brassica rapa
BraA09t39730Z Brassica rapa
C02p35410 Brassica napus
C05p21350 Brassica napus
C06p30680 Brassica napus
C06p52080 Brassica napus
C07p21520 Brassica napus
C08p21440 Brassica napus
CAN.G1261.5 Capsicum annuum
CANSAT25G0676 Cannabis sativa
CARHR022580 Cardamine hirsuta
CARHR071570 Cardamine hirsuta
Carub.0001s2178 Capsella rubella
Carub.0002s2500 Capsella rubella
Ca_15243_v3 Cicer arietinum L.
Cc10_g07380 Coffea canephora
CDE12G0356 Ceratophyllum demersum
Cfa013623 Carpinus fangiana
Ciclev10001646m.g Citrus clementina
CiPaw.07G181200 Carya illinoinensis
CiPaw.08G044000 Carya illinoinensis
ClCG08G011040 Citrullus lanatus
ClCG11G015440 Citrullus lanatus
COL.COLO4_16427 Corchorus olitorius
Cpa.g.sc36.119 Carica papaya
CsaV3_2G024220 Cucumis sativus L.
CsaV3_4G028650 Cucumis sativus L.
CSS0001866 Camellia sinensis var. sinensis
CSS0021337 Camellia sinensis var. sinensis
Dinv13027 Davidia involucrata
Duzib041G0577 Durio zibethinus
Duzib093G1759 Durio zibethinus
Duzib116G0286 Durio zibethinus
ECA232G2894 Erigeron canadensis
ECA246G1087 Erigeron canadensis
EL10Ac1g01249 Beta vulgaris
Eucgr.F00301 Eucalyptus grandis
Eucgr.F02437 Eucalyptus grandis
FAN04G1592 Fragaria x ananassa
FAN08G0462 Fragaria x ananassa
FAN13G1718 Fragaria x ananassa
FAN18G1313 Fragaria x ananassa
FvH4_5g37730 Fragaria vesca
Glyma.04G103500 Glycine max
Glyma.06G104700 Glycine max
Gohir.A05G227800 Gossypium hirsutum
Gohir.A06G036700 Gossypium hirsutum
Gohir.D05G230200 Gossypium hirsutum
Gohir.D06G037500 Gossypium hirsutum
Gorai.009G238400 Gossypium raimondii
Gorai.010G042400 Gossypium raimondii
GSVIVG01009013001 Vitis vinifera
HanXRQChr05g0162921 Helianthus annuus
HanXRQChr15g0491381 Helianthus annuus
Haze_22250 Corylus avellana
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla
HPP92_002331 Vanilla planifolia
HPP92_019313 Vanilla planifolia
Lalb_Chr04g0253191 Lupinus albus
Lalb_Chr08g0241981 Lupinus albus
Lalb_Chr11g0065491 Lupinus albus
Lalb_Chr17g0344141 Lupinus albus
Lj1g0006284 Lotus japonicus
Lsat_1_v5_gn_9_43840 Lactuca sativa
Manes.02G153800 Manihot esculenta
Manes.18G068600 Manihot esculenta
MBI02_g08739_MAGBIO Magnolia biondii
MD08G1180900 Malus domestica
MD15G1366500 Malus domestica
Medtr3g074210 Medicago truncatula
MELO3C010430.2 Cucumis melo
MELO3C011359.2 Cucumis melo
Migut.N02906 Erythranthe guttata
Migut.O00455 Erythranthe guttata
MSTRG.22149 Avicennia marina
MSTRG.24466 Avicennia marina
Nitab4.5_0000421g0080 Nicotiana tabacum
Nitab4.5_0000675g0060 Nicotiana tabacum
Nitab4.5_0001992g0040 Nicotiana tabacum
Nitab4.5_0002243g0010 Nicotiana tabacum
Nn5g29082 Nelumbo nucifera
Oeu024542.1 Olea europaea
Oeu061492.1 Olea europaea
Os02g0753400 Oryza sativa ssp. japonica
Os09g0370000 Oryza sativa ssp. japonica
Peaxi162Scf00041g01015 Petunia axillaris
Peaxi162Scf00160g00147 Petunia axillaris
PGR042G1650 Punica granatum
PGSC0003DMG400008539 Solanum tuberosum
PGSC0003DMG400009479 Solanum tuberosum
Phvul.009G029900 Phaseolus vulgaris
Potri.002G094700 Populus trichocarpa
Potri.005G166400 Populus trichocarpa
Prupe.1G514400 Prunus persica
Psat5g138360 Pisum sativum
PSO210G6507 Papaver somniferum
PSO447G0218 Papaver somniferum
PSO541G2428 Papaver somniferum
PSO781G0128 Papaver somniferum
QL12p036407 Quercus lobata
RcHm_v2.0_Chr7g0239471 Rosa chinensis
Rhsim06G0083500 Rhododendron simsii
Sabra02G0074700 Salix brachista
Sabra05G0125400 Salix brachista
SalBow7G0529 Salvia bowleyana
Sc23g0000110 Simmondsia chinensis
Sed0003612 Sechium edule
Sed0005628 Sechium edule
Sed0022190 Sechium edule
SEGI_41423 Sequoiadendron giganteum
Solyc04g072940.4 Solanum lycopersicum
Solyc12g056990.1 Solanum lycopersicum
Sopen00g003260 Solanum pennellii
Sopen04g029130 Solanum pennellii
Sp1g19740 Schrenkiella parvula
Sp5g33250 Schrenkiella parvula
TAR628G1119 Trochodendron aralioides
THA.LOC104809709 Tarenaya hassleriana
Thecc.08G109100 Theobroma cacao
Thhalv10008264m.g Eutrema salsugineum
Thhalv10018798m.g Eutrema salsugineum
TPR.G35206 Trifolium pratense
TWI12G0076 Tripterygium wilfordii
TWI56G0888 Tripterygium wilfordii
unitig_21.g20601 Utricularia gibba
unitig_578.g16204 Utricularia gibba
unitig_744.g24093 Utricularia gibba
vmacro21241 Vaccinium macrocarpon
VMungo1309G2192 Vigna mungo
Zm00001eb098670 Zea mays
Zm00001eb194180 Zea mays
Zm00001eb255200 Zea mays
Zm00001eb311240 Zea mays

User provided reference genes

Program Settings