Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33020 Brassica napus
A05p13780 Brassica napus
A09p67310 Brassica napus
Aa31LG1G25440 Aethionema arabicum
Aa31LG5G5270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3693 Anthoceros agrestis
Actinidia27120 Actinidia chinensis
AL1G15640 Arabidopsis lyrata
AL1G15650 Arabidopsis lyrata
AL4G26980 Arabidopsis lyrata
AL4G42550 Arabidopsis lyrata
Aqoxy2G04156 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1Q5EFH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D9AT9V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DMY77W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GG9VXM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H4TYTD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6LTI0 Arachis hypogaea
AT1G05730 Arabidopsis thaliana
AT1G05740 Arabidopsis thaliana
AT2G31725 Arabidopsis thaliana
AT2G43720 Arabidopsis thaliana
ATR0743G180 Amborella trichopoda
Atru.chr4.1453 Acer truncatum
AUR62002412 Chenopodium quinoa
AUR62023777 Chenopodium quinoa
BcaB02g10413 Brassica carinata
BcaB05g25136 Brassica carinata
BcaB06g29344 Brassica carinata
BcaC02g08825 Brassica carinata
BcaC02g11282 Brassica carinata
BcaC07g42112 Brassica carinata
BcaC07g42114 Brassica carinata
BcaC07g42117 Brassica carinata
BolC4t23353H Brassica oleracea
BolC4t26594H Brassica oleracea
BolC4t28571H Brassica oleracea
BolC8t52690H Brassica oleracea
BraA04t18761Z Brassica rapa
BraA05t20315Z Brassica rapa
BraA09t42062Z Brassica rapa
C04p18050 Brassica napus
C04p50010 Brassica napus
C04p70710 Brassica napus
C08p51620 Brassica napus
CAN.G1401.2 Capsicum annuum
CAN.G759.3 Capsicum annuum
CANSAT56G1338 Cannabis sativa
CARHR005250 Cardamine hirsuta
CARHR125410 Cardamine hirsuta
CARHR138910 Cardamine hirsuta
Carub.0001s0508 Capsella rubella
Carub.0001s0509 Capsella rubella
Carub.0004s1303 Capsella rubella
Carub.0004s2626 Capsella rubella
Ca_14117_v3 Cicer arietinum L.
CBR_g3774 Chara braunii
Cc03_g14390 Coffea canephora
CDE04G0234 Ceratophyllum demersum
CDE09G1276 Ceratophyllum demersum
Cfa015673 Carpinus fangiana
Ciclev10022699m.g Citrus clementina
CiPaw.01G168800 Carya illinoinensis
CiPaw.02G099200 Carya illinoinensis
CiPaw.16G066500 Carya illinoinensis
ClCG11G013550 Citrullus lanatus
COL.COLO4_38113 Corchorus olitorius
Cpa.g.sc9.377 Carica papaya
Cre12.g551900 Chlamydomonas reinhardtii
CsaV3_5G030170 Cucumis sativus L.
CSS0002835 Camellia sinensis var. sinensis
CSS0038398 Camellia sinensis var. sinensis
CSS0049854 Camellia sinensis var. sinensis
DCAR_005455 Daucus carota
DCAR_027517 Daucus carota
Dinv18325 Davidia involucrata
Duzib151G1155 Durio zibethinus
Duzib268G1060 Durio zibethinus
ECA248G0756 Erigeron canadensis
EL10Ac3g06102 Beta vulgaris
Eucgr.H00289 Eucalyptus grandis
FAN02G1921 Fragaria x ananassa
FAN06G3125 Fragaria x ananassa
FAN11G1624 Fragaria x ananassa
FAN16G1833 Fragaria x ananassa
FAN21G3935 Fragaria x ananassa
FAN25G1394 Fragaria x ananassa
FvH4_3g34590 Fragaria vesca
Glyma.02G058200 Glycine max
Glyma.04G117900 Glycine max
Glyma.06G288000 Glycine max
Glyma.06G288100 Glycine max
Glyma.06G288200 Glycine max
Glyma.06G288300 Glycine max
Glyma.06G319900 Glycine max
Glyma.06G320000 Glycine max
Gohir.A09G213608 Gossypium hirsutum
Gohir.D09G212300 Gossypium hirsutum
Gorai.006G232100 Gossypium raimondii
GSVIVG01035132001 Vitis vinifera
HanXRQChr11g0343091 Helianthus annuus
Haze_00850 Corylus avellana
Haze_00864 Corylus avellana
HPP92_023724 Vanilla planifolia
Hund03208 Selenicereus undatus
Lalb_Chr18g0048821 Lupinus albus
Lj3g0023756 Lotus japonicus
Lj3P164T1 Lonicera japonica
Lj6A207G21 Lonicera japonica
Lj6A217G7 Lonicera japonica
Lju359P1T4 Lonicera japonica
Lsat_1_v5_gn_1_74581 Lactuca sativa
Lsat_1_v5_gn_3_36701 Lactuca sativa
Manes.05G137000 Manihot esculenta
Mapoly0006s0297 Marchantia polymorpha
MBI07_g11491_MAGBIO Magnolia biondii
MCO09G689 Micromonas commoda
MD04G1037100 Malus domestica
Medtr3g009130 Medicago truncatula
MELO3C011855.2 Cucumis melo
Migut.N03060 Erythranthe guttata
MSTRG.22037 Avicennia marina
MSTRG.24564 Avicennia marina
Nitab4.5_0000013g0490 Nicotiana tabacum
Nitab4.5_0004700g0050 Nicotiana tabacum
Nitab4.5_0007474g0040 Nicotiana tabacum
Nn2g13969 Nelumbo nucifera
Oeu015712.2 Olea europaea
Oeu050329.1 Olea europaea
Os11g0256200 Oryza sativa ssp. japonica
Peaxi162Scf00075g01329 Petunia axillaris
Peaxi162Scf00579g00013 Petunia axillaris
PGR142G3702 Punica granatum
PGSC0003DMG400016054 Solanum tuberosum
PGSC0003DMG400016330 Solanum tuberosum
Phvul.005G007000 Phaseolus vulgaris
Potri.013G127400 Populus trichocarpa
Pp3c22_16840 Physcomitrium patens
PRCOL_00002126 Prasinoderma coloniale
Prupe.1G185700 Prunus persica
Psat5g230680 Pisum sativum
PSO017G0931 Papaver somniferum
PSO573G0028 Papaver somniferum
QL10p056544 Quercus lobata
RcHm_v2.0_Chr4g0405841 Rosa chinensis
Rhsim09G0008700 Rhododendron simsii
Sabra13G0106500 Salix brachista
SalBow6G3114 Salvia bowleyana
Sc19g0002260 Simmondsia chinensis
Sed0023559 Sechium edule
SEGI_40113 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08849 Striga asiatica
SGA_v2.0_scaffold25G11004 Striga asiatica
SMO116G0121 Selaginella moellendorffii
SMO174G0123 Selaginella moellendorffii
SMO174G0129 Selaginella moellendorffii
Solyc06g053490.4 Solanum lycopersicum
Solyc08g014300.4 Solanum lycopersicum
Sopen06g018570 Solanum pennellii
Sopen08g005210 Solanum pennellii
Sp1g04550 Schrenkiella parvula
Sp4g14200 Schrenkiella parvula
Sp4g25790 Schrenkiella parvula
TAR633G0046 Trochodendron aralioides
THA.LOC104800922 Tarenaya hassleriana
THA.LOC104804105 Tarenaya hassleriana
THA.LOC104815872 Tarenaya hassleriana
Thecc.04G164400 Theobroma cacao
Thhalv10001669m.g Eutrema salsugineum
Thhalv10009017m.g Eutrema salsugineum
Thhalv10017374m.g Eutrema salsugineum
TPR.G16707 Trifolium pratense
TWI63G0384 Tripterygium wilfordii
unitig_578.g16270 Utricularia gibba
vmacro00688 Vaccinium macrocarpon
VMungo1080G1004 Vigna mungo
Zm00001eb169100 Zea mays
Zm00001eb169120 Zea mays

User provided reference genes

Program Settings