Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17440 Brassica napus
A07p30560 Brassica napus
A07p37990 Brassica napus
Aa31LG4G8790 Aethionema arabicum
Aa31LG7G6630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis
Actinidia29569 Actinidia chinensis
Ah.03g146560 Amaranthus hybridus
AL2G31420 Arabidopsis lyrata
Aqoxy1G00206 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea
AT1G71840 Arabidopsis thaliana
ATR0001G003 Amborella trichopoda
Atru.chr13.1880 Acer truncatum
AUR62001664 Chenopodium quinoa
AUR62003626 Chenopodium quinoa
AUR62017935 Chenopodium quinoa
AUR62024845 Chenopodium quinoa
BcaB03g15621 Brassica carinata
BcaC08g45753 Brassica carinata
BcaC08g46615 Brassica carinata
BolC2t08961H Brassica oleracea
BolC6t38638H Brassica oleracea
BolC6t38646H Brassica oleracea
BolC6t38649H Brassica oleracea
BolC6t39643H Brassica oleracea
BraA02t06789Z Brassica rapa
BraA07t30691Z Brassica rapa
BraA07t31364Z Brassica rapa
C02p29130 Brassica napus
C06p35320 Brassica napus
C06p45910 Brassica napus
CANSAT11G1897 Cannabis sativa
CANSAT25G1043 Cannabis sativa
CARHR124080 Cardamine hirsuta
CARHR188970 Cardamine hirsuta
CARHR290910 Cardamine hirsuta
Carub.0002s1860 Capsella rubella
Ca_30575_v3 Cicer arietinum L.
CBR_g49506 Chara braunii
Cc11_g02860 Coffea canephora
CDE08G0059 Ceratophyllum demersum
Cfa018220 Carpinus fangiana
Cfa022233 Carpinus fangiana
Ciclev10003916m.g Citrus clementina
Ciclev10008663m.g Citrus clementina
CiPaw.15G007000 Carya illinoinensis
ClCG08G002560 Citrullus lanatus
COL.COLO4_03395 Corchorus olitorius
COL.COLO4_13734 Corchorus olitorius
COL.COLO4_18940 Corchorus olitorius
Cpa.g.sc2399.1 Carica papaya
Cpa.g.sc66.118 Carica papaya
Cre12.g487200 Chlamydomonas reinhardtii
Cre12.g552900 Chlamydomonas reinhardtii
CsaV3_6G002750 Cucumis sativus L.
CSS0010217 Camellia sinensis var. sinensis
CSS0047372 Camellia sinensis var. sinensis
DCAR_000644 Daucus carota
Dinv13071 Davidia involucrata
Dinv44716 Davidia involucrata
Duzib211G0424 Durio zibethinus
ECA232G2276 Erigeron canadensis
ECA236G4407 Erigeron canadensis
EL10Ac5g10958 Beta vulgaris
EL10Ac6g15251 Beta vulgaris
EL10Ac9g21859 Beta vulgaris
Eucgr.E02330 Eucalyptus grandis
FAN04G3257 Fragaria x ananassa
FAN08G0696 Fragaria x ananassa
FAN18G2025 Fragaria x ananassa
FAN18G2798 Fragaria x ananassa
FAN20G2057 Fragaria x ananassa
FAN24G0738 Fragaria x ananassa
FvH4_2g12470 Fragaria vesca
FvH4_5g22350 Fragaria vesca
Glyma.09G057500 Glycine max
Glyma.10G218500 Glycine max
Glyma.10G218600 Glycine max
Glyma.17G173200 Glycine max
Glyma.20G173100 Glycine max
Gohir.A06G109200 Gossypium hirsutum
Gohir.A09G169700 Gossypium hirsutum
Gohir.D06G113300 Gossypium hirsutum
Gohir.D09G165400 Gossypium hirsutum
Gorai.006G187200 Gossypium raimondii
Gorai.010G129100 Gossypium raimondii
GSVIVG01001592001 Vitis vinifera
GSVIVG01015205001 Vitis vinifera
HanXRQChr11g0320411 Helianthus annuus
Haze_17883 Corylus avellana
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla
HPP92_008098 Vanilla planifolia
Hund19608 Selenicereus undatus
Lalb_Chr20g0121511 Lupinus albus
Lj2C196T3 Lonicera japonica
Lj4A109T49 Lonicera japonica
Lj4C56G20 Lonicera japonica
Lj5g0008809 Lotus japonicus
LjContig00222g0022410 Lotus japonicus
Lsat_1_v5_gn_9_43060 Lactuca sativa
Manes.02G188000 Manihot esculenta
Mapoly0155s0005 Marchantia polymorpha
MBI10_g41322_MAGBIO Magnolia biondii
MBI10_g42737_MAGBIO Magnolia biondii
MCO10G384 Micromonas commoda
MD02G1272000 Malus domestica
MD07G1041000 Malus domestica
Medtr1g097140 Medicago truncatula
Medtr7g079470 Medicago truncatula
Medtr7g111550 Medicago truncatula
MELO3C024997.2 Cucumis melo
Migut.D01748 Erythranthe guttata
Migut.I00088 Erythranthe guttata
Migut.J01123 Erythranthe guttata
MSTRG.9615 Avicennia marina
Nitab4.5_0000366g0190 Nicotiana tabacum
Nitab4.5_0002890g0010 Nicotiana tabacum
Nitab4.5_0002890g0020 Nicotiana tabacum
Nn3g16733 Nelumbo nucifera
Oeu053830.1 Olea europaea
Oeu053831.1 Olea europaea
Os03g0685600 Oryza sativa ssp. japonica
PGR031G2719 Punica granatum
PGSC0003DMG400028735 Solanum tuberosum
Phvul.011G104600 Phaseolus vulgaris
Potri.013G116900 Populus trichocarpa
Potri.019G087200 Populus trichocarpa
Pp3c14_20020 Physcomitrium patens
PRCOL_00002905 Prasinoderma coloniale
Prupe.8G049100 Prunus persica
Psat6g019720 Pisum sativum
Psat6g021120 Pisum sativum
PSO455G0073 Papaver somniferum
PSO541G3150 Papaver somniferum
PSO675G8150 Papaver somniferum
QL02p034830 Quercus lobata
RcHm_v2.0_Chr6g0272901 Rosa chinensis
RcHm_v2.0_Chr7g0210071 Rosa chinensis
RcHm_v2.0_Chr7g0229131 Rosa chinensis
Rhsim04G0038100 Rhododendron simsii
Rhsim06G0087400 Rhododendron simsii
Sabra13G0099000 Salix brachista
Sabra18G0022600 Salix brachista
Sabra19G0097800 Salix brachista
Sabra19G0101300 Salix brachista
SalBow7G2889 Salvia bowleyana
Sc16g0003970 Simmondsia chinensis
Sed0004416 Sechium edule
Sed0012824 Sechium edule
SEGI_39165 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31919 Striga asiatica
SHI13909 Sapria himalayana
SMO343G0013 Selaginella moellendorffii
SMO347G0114 Selaginella moellendorffii
SMO367G0065 Selaginella moellendorffii
Solyc07g008860.3 Solanum lycopersicum
Sopen07g004790 Solanum pennellii
Sp5g26870 Schrenkiella parvula
SpUn0020_0100 Schrenkiella parvula
TAR381G0993 Trochodendron aralioides
TAR625G1217 Trochodendron aralioides
THA.LOC104826775 Tarenaya hassleriana
Thecc.08G198300 Theobroma cacao
Thecc.09G236800 Theobroma cacao
Thhalv10018505m.g Eutrema salsugineum
TPR.G30584 Trifolium pratense
TWI12G0147 Tripterygium wilfordii
TWI75G1061 Tripterygium wilfordii
unitig_747.g21315 Utricularia gibba
vmacro21210 Vaccinium macrocarpon
VMungo0720G0336 Vigna mungo
VMungo1080G1176 Vigna mungo
Zm00001eb139680 Zea mays
Zm00001eb362180 Zea mays

User provided reference genes

Program Settings